RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 TXNDC5Q8NBS9 432 aaKnown RBP12.14□□□□□ -0.47
SSH2-208ENST00000579040 TATDN2Q93075 761 aa12.14□□□□□ -0.47
SSH2-208ENST00000579040 SLC35C1Q96A29 364 aa12.14□□□□□ -0.47
SSH2-208ENST00000579040 CEP63Q96MT8 703 aa12.14□□□□□ -0.47
SSH2-208ENST00000579040 XPO6Q96QU8 1125 aaKnown RBP12.14□□□□□ -0.47
SSH2-208ENST00000579040 POLMQ9NP87 494 aaPredicted RBP12.14□□□□□ -0.47
SSH2-208ENST00000579040 VPS45Q9NRW7 570 aa12.14□□□□□ -0.47
SSH2-208ENST00000579040 ZNF510Q9Y2H8 683 aa12.14□□□□□ -0.47
SSH2-208ENST00000579040 GON4LQ3T8J9 2241 aa12.14□□□□□ -0.47
SSH2-208ENST00000579040 TRIM49BA6NDI0 452 aa12.13□□□□□ -0.47
SSH2-208ENST00000579040 TBC1D3BA6NDS4 549 aa12.13□□□□□ -0.47
SSH2-208ENST00000579040 SGK1O00141 431 aa12.13□□□□□ -0.47
SSH2-208ENST00000579040 PMM2O15305 246 aa12.13□□□□□ -0.47
SSH2-208ENST00000579040 STC2O76061 302 aa12.13□□□□□ -0.47
SSH2-208ENST00000579040 BCAT1P54687 386 aa12.13□□□□□ -0.47
SSH2-208ENST00000579040 COG7P83436 770 aa12.13□□□□□ -0.47
SSH2-208ENST00000579040 AASDHQ4L235 1098 aaPredicted RBP12.13□□□□□ -0.47
SSH2-208ENST00000579040 RAB41Q5JT25 222 aa12.13□□□□□ -0.47
SSH2-208ENST00000579040 PMS2CLQ68D20 193 aa12.13□□□□□ -0.47
SSH2-208ENST00000579040 GRAMD4Q6IC98 578 aa12.13□□□□□ -0.47
SSH2-208ENST00000579040 TMEM92Q6UXU6 159 aa12.13□□□□□ -0.47
SSH2-208ENST00000579040 ZNF513Q8N8E2 541 aaPredicted RBP12.13□□□□□ -0.47
SSH2-208ENST00000579040 NAT16Q8N8M0 369 aa12.13□□□□□ -0.47
SSH2-208ENST00000579040 MDGA1Q8NFP4 955 aa12.13□□□□□ -0.47
SSH2-208ENST00000579040 OLIG1Q8TAK6 271 aa12.13□□□□□ -0.47
SSH2-208ENST00000579040 DDX1Q92499 740 aaKnown RBP12.13□□□□□ -0.47
SSH2-208ENST00000579040 ERCC4Q92889 916 aaPredicted RBP12.13□□□□□ -0.47
SSH2-208ENST00000579040 BBS2Q9BXC9 721 aa12.13□□□□□ -0.47
SSH2-208ENST00000579040 TPSD1Q9BZJ3 242 aa12.13□□□□□ -0.47
SSH2-208ENST00000579040 DCLK3Q9C098 648 aa12.13□□□□□ -0.47
SSH2-208ENST00000579040 DNAJC17Q9NVM6 304 aaKnown RBP12.13□□□□□ -0.47
SSH2-208ENST00000579040 BICDL2A1A5D9 508 aa12.12□□□□□ -0.47
SSH2-208ENST00000579040 BCLAF3A2AJT9 711 aaKnown RBP12.12□□□□□ -0.47
SSH2-208ENST00000579040 ANTXRLA6NF34 631 aa12.12□□□□□ -0.47
SSH2-208ENST00000579040 NEDD8-MDP1E9PL57 170 aa12.12□□□□□ -0.47
SSH2-208ENST00000579040 XPO1O14980 1071 aaKnown RBP12.12□□□□□ -0.47
SSH2-208ENST00000579040 DCLK1O15075 740 aa12.12□□□□□ -0.47
SSH2-208ENST00000579040 MDM4O15151 490 aa12.12□□□□□ -0.47
SSH2-208ENST00000579040 ADAM23O75077 832 aa12.12□□□□□ -0.47
SSH2-208ENST00000579040 TYRP14679 529 aa12.12□□□□□ -0.47
SSH2-208ENST00000579040 HNRNPLP14866 589 aaKnown RBP eCLIP12.12□□□□□ -0.471e-6■■□□□ 13.2
SSH2-208ENST00000579040 GBP1P32455 592 aa12.12□□□□□ -0.47
SSH2-208ENST00000579040 FMO5P49326 533 aa12.12□□□□□ -0.47
SSH2-208ENST00000579040 BST2Q10589 180 aaKnown RBP12.12□□□□□ -0.47
SSH2-208ENST00000579040 BYSLQ13895 437 aaKnown RBP12.12□□□□□ -0.47
SSH2-208ENST00000579040 SF3A2Q15428 464 aaKnown RBP12.12□□□□□ -0.47
SSH2-208ENST00000579040 SGO2Q562F6 1265 aa12.12□□□□□ -0.47
SSH2-208ENST00000579040 C10orf76Q5T2E6 689 aa12.12□□□□□ -0.47
SSH2-208ENST00000579040 EMC10Q5UCC4 262 aa12.12□□□□□ -0.47
SSH2-208ENST00000579040 PIGZQ86VD9 579 aa12.12□□□□□ -0.47
SSH2-208ENST00000579040 TTC30AQ86WT1 665 aa12.12□□□□□ -0.47
SSH2-208ENST00000579040 UBR7Q8N806 425 aa12.12□□□□□ -0.47
SSH2-208ENST00000579040 SPACA7Q96KW9 195 aa12.12□□□□□ -0.47
SSH2-208ENST00000579040 HESX1Q9UBX0 185 aa12.12□□□□□ -0.47
SSH2-208ENST00000579040 NUDT5Q9UKK9 219 aa12.12□□□□□ -0.47
SSH2-208ENST00000579040 MAN1B1Q9UKM7 699 aa12.12□□□□□ -0.47
SSH2-208ENST00000579040 KIAA1257Q9ULG3 409 aa12.12□□□□□ -0.47
SSH2-208ENST00000579040 STRIP2Q9ULQ0 834 aa12.12□□□□□ -0.47
SSH2-208ENST00000579040 STARD13Q9Y3M8 1113 aa12.12□□□□□ -0.47
SSH2-208ENST00000579040 TPRP12270 2363 aaKnown RBP12.12□□□□□ -0.47
SSH2-208ENST00000579040 DCDC2BA2VCK2 349 aa12.11□□□□□ -0.47
SSH2-208ENST00000579040 P4HA2O15460 535 aa12.11□□□□□ -0.47
SSH2-208ENST00000579040 GDF9O60383 454 aa12.11□□□□□ -0.47
SSH2-208ENST00000579040 ZBED1O96006 694 aa12.11□□□□□ -0.47
SSH2-208ENST00000579040 PAEPP09466 180 aa12.11□□□□□ -0.47
SSH2-208ENST00000579040 VDRP11473 427 aa12.11□□□□□ -0.47
SSH2-208ENST00000579040 CD44P16070 742 aaKnown RBP12.11□□□□□ -0.47
SSH2-208ENST00000579040 NTSR1P30989 418 aa12.11□□□□□ -0.47
SSH2-208ENST00000579040 CHKAP35790 457 aa12.11□□□□□ -0.47
SSH2-208ENST00000579040 P2RY2P41231 377 aa12.11□□□□□ -0.47
SSH2-208ENST00000579040 TKTL1P51854 596 aa12.11□□□□□ -0.47
SSH2-208ENST00000579040 YWHAGP61981 247 aaKnown RBP eCLIP12.11□□□□□ -0.47
SSH2-208ENST00000579040 CETN1Q12798 172 aa12.11□□□□□ -0.47
SSH2-208ENST00000579040 GOLGA7BQ2TAP0 167 aa12.11□□□□□ -0.47
SSH2-208ENST00000579040 CCDC40Q4G0X9 1142 aa12.11□□□□□ -0.47
SSH2-208ENST00000579040 PM20D1Q6GTS8 502 aa12.11□□□□□ -0.47
SSH2-208ENST00000579040 TTI2Q6NXR4 508 aa12.11□□□□□ -0.47
SSH2-208ENST00000579040 TPGS1Q6ZTW0 290 aa12.11□□□□□ -0.47
SSH2-208ENST00000579040 RSRC2Q7L4I2 434 aaKnown RBP12.11□□□□□ -0.47
SSH2-208ENST00000579040 MIB1Q86YT6 1006 aa12.11□□□□□ -0.47
SSH2-208ENST00000579040 SCML4Q8N228 414 aa12.11□□□□□ -0.47
SSH2-208ENST00000579040 NT5C1BQ96P26 610 aa12.11□□□□□ -0.47
SSH2-208ENST00000579040 OLA1Q9NTK5 396 aaKnown RBP12.11□□□□□ -0.47
SSH2-208ENST00000579040 MARCH2Q9P0N8 246 aa12.11□□□□□ -0.47
SSH2-208ENST00000579040 BCCIPQ9P287 314 aaKnown RBP eCLIP12.11□□□□□ -0.47
SSH2-208ENST00000579040 RASAL2Q9UJF2 1139 aa12.11□□□□□ -0.47
SSH2-208ENST00000579040 TSPAN16Q9UKR8 245 aa12.11□□□□□ -0.47
SSH2-208ENST00000579040 CKAP5Q14008 2032 aa12.1□□□□□ -0.47
SSH2-208ENST00000579040 TCRBV21S2A2A0A5A6 115 aa12.1□□□□□ -0.47
SSH2-208ENST00000579040 O00370 1275 aa12.1□□□□□ -0.47
SSH2-208ENST00000579040 CAVIN2O95810 425 aa12.1□□□□□ -0.47
SSH2-208ENST00000579040 PENKP01210 267 aaPredicted RBP12.1□□□□□ -0.47
SSH2-208ENST00000579040 SETSIPP0DME0 302 aa12.1□□□□□ -0.47
SSH2-208ENST00000579040 CD19P15391 556 aa12.1□□□□□ -0.47
SSH2-208ENST00000579040 DGKGP49619 791 aa12.1□□□□□ -0.47
SSH2-208ENST00000579040 CREB5Q02930 508 aa12.1□□□□□ -0.47
SSH2-208ENST00000579040 PDE4CQ08493 712 aa12.1□□□□□ -0.47
SSH2-208ENST00000579040 EFEMP1Q12805 493 aa12.1□□□□□ -0.47
SSH2-208ENST00000579040 MORC3Q14149 939 aa12.1□□□□□ -0.47
SSH2-208ENST00000579040 CCDC6Q16204 474 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms