RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	COPA	P53621	1224 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	MFAP3	P55082	362 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	TNNC1	P63316	161 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	MRPS21	P82921	87 aa	Known RBP	4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	CREB5	Q02930	508 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	SEMA3B	Q13214	749 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	MAPRE1	Q15691	268 aa	Known RBP	4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	TAF12	Q16514	161 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	SGSM1	Q2NKQ1	1148 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	ZNF667	Q5HYK9	610 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	KCNT1	Q5JUK3	1230 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	HECTD3	Q5T447	861 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	PSAPL1	Q6NUJ1	521 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	CC2D1A	Q6P1N0	951 aa	Predicted RBP	4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	KRBA2	Q6ZNG9	492 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	ARMCX6	Q7L4S7	300 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	UNC93A	Q86WB7	457 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	FMR1NB	Q8N0W7	255 aa	Predicted RBP	4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	ZNF276	Q8N554	614 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	TERB1	Q8NA31	727 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	TSTD1	Q8NFU3	115 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	SORCS1	Q8WY21	1168 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	OVCA2	Q8WZ82	227 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	SYAP1	Q96A49	352 aa	Predicted RBP	4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	JAKMIP2	Q96AA8	810 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	SMARCD1	Q96GM5	515 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	MYO19	Q96H55	970 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	MRGPRX1	Q96LB2	322 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	EDEM2	Q9BV94	578 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	MKRN2	Q9H000	416 aa	Known RBP	4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	ARHGEF4	Q9NR80	690 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	VPS45	Q9NRW7	570 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	PLK2	Q9NYY3	685 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	CALCOCO1	Q9P1Z2	691 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	CGN	Q9P2M7	1197 aa	Known RBP	4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	COQ4	Q9Y3A0	265 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	ATRX	P46100	2492 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	BAHCC1	Q9P281	2608 aa		4.7	□□□□□ -1.66
PPP4R1-209	ENST00000578329	ARID1B	Q8NFD5	2236 aa	Predicted RBP	4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	CFAP46	Q8IYW2	2715 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	SPAAR	A0A1B0GVQ0	90 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329		A0A1W2PQ27	194 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329		A0A1W2PQ64	194 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329		A0A1W2PQD8	194 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	TCRBV21S2A2	A0A5A6	115 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	YJEFN3	A6XGL0	299 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329		E7ENQ6	273 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329		I6L893	689 aa	Predicted RBP	4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	CBFA2T3	O75081	653 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	ZNF202	O95125	648 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	RTN3	O95197	1032 aa	Predicted RBP	4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	CENPB	P07199	599 aa	Predicted RBP	4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	RARG	P13631	454 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	TYR	P14679	529 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	CD58	P19256	250 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	NR2F2	P24468	414 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	PRKCH	P24723	683 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	MAOB	P27338	520 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	IL12RB1	P42701	662 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	PRCP	P42785	496 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	PITX1	P78337	314 aa	Predicted RBP	4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	APBA1	Q02410	837 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	BIRC3	Q13489	604 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	TRPC3	Q13507	836 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	PNOC	Q13519	176 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	PPP2R5D	Q14738	602 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	PTPRN	Q16849	979 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	FUT11	Q495W5	492 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	AASDH	Q4L235	1098 aa	Predicted RBP	4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	C10orf76	Q5T2E6	689 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	SH3PXD2A	Q5TCZ1	1133 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	ARHGAP17	Q68EM7	881 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	ANKRD40	Q6AI12	368 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	PM20D1	Q6GTS8	502 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	DPY19L2P1	Q6NXN4	242 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	KLHDC10	Q6PID8	442 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	SLC23A3	Q6PIS1	610 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	CCDC186	Q7Z3E2	898 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	PIGZ	Q86VD9	579 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	GUF1	Q8N442	669 aa	Known RBP	4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	FSIP1	Q8NA03	581 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	DEFB124	Q8NES8	71 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	IPO4	Q8TEX9	1081 aa	Known RBP	4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	CLEC4C	Q8WTT0	213 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	HMGB4	Q8WW32	186 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	PIGK	Q92643	395 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	BHMT	Q93088	406 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	SLC35C1	Q96A29	364 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	ACD	Q96AP0	544 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	VOPP1	Q96AW1	172 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	CYFIP2	Q96F07	1278 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	CAMK1G	Q96NX5	476 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	SLITRK1	Q96PX8	696 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	DUSP16	Q9BY84	665 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	ADAM33	Q9BZ11	813 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	NIF3L1	Q9GZT8	377 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	MTG2	Q9H4K7	406 aa		4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	UPF2	Q9HAU5	1272 aa	Known RBP	4.69	□□□□□ -1.66
PPP4R1-209	ENST00000578329	IL21R	Q9HBE5	538 aa		4.69	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 46 ms