RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 PM20D1Q6GTS8 502 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 PLEKHA7Q6IQ23 1121 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 ZSCAN30Q86W11 494 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 REXO1L1PQ8IX06 675 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 CCAR2Q8N163 923 aaKnown RBP8.42□□□□□ -1.06
COPS3-215ENST00000578317 MICAL1Q8TDZ2 1067 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 HDAC7Q8WUI4 952 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 RNF34Q969K3 372 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 MCRS1Q96EZ8 462 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 CPXM1Q96SM3 734 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 KCNK16Q96T55 309 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 DESI2Q9BSY9 194 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 TSGA10Q9BZW7 698 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 LACRTQ9GZZ8 138 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 MRPL47Q9HD33 250 aaKnown RBP8.42□□□□□ -1.06
COPS3-215ENST00000578317 CNGB3Q9NQW8 809 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 ENTPD7Q9NQZ7 604 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 KRT82Q9NSB4 513 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 TMEM30AQ9NV96 361 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 PARVAQ9NVD7 372 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 ABI2Q9NYB9 513 aaPredicted RBP8.42□□□□□ -1.06
COPS3-215ENST00000578317 LMCD1Q9NZU5 365 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 UVRAGQ9P2Y5 699 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 DNMT3LQ9UJW3 386 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 MTUS1Q9ULD2 1270 aa8.42□□□□□ -1.06
COPS3-215ENST00000578317 TDRD15B5MCY1 1934 aaKnown RBP8.42□□□□□ -1.06
COPS3-215ENST00000578317 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.41□□□□□ -1.06
COPS3-215ENST00000578317 SIGLEC16A6NMB1 481 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 HIDE1A8MVS5 230 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 F8VP50 259 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 SART1O43290 800 aaKnown RBP8.41□□□□□ -1.06
COPS3-215ENST00000578317 TGM5O43548 720 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 KRT86O43790 486 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 MTA2O94776 668 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 FBXO21O94952 628 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 GLI1P08151 1106 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 ELF1P32519 619 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 GRIK1P39086 918 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 ARHGAP25P42331 645 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 CACNA2D1P54289 1103 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 ARPP19P56211 112 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 ADCY1Q08828 1119 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 BEND5Q7L4P6 421 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 KIAA1328Q86T90 577 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 XYLT1Q86Y38 959 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 RHOT2Q8IXI1 618 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 NUP93Q8N1F7 819 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 C3orf20Q8ND61 904 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 IPO4Q8TEX9 1081 aaKnown RBP8.41□□□□□ -1.06
COPS3-215ENST00000578317 AUTS2Q8WXX7 1259 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 ARNTL2Q8WYA1 636 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 IRGQQ8WZA9 623 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 MRPL38Q96DV4 380 aaKnown RBP8.41□□□□□ -1.06
COPS3-215ENST00000578317 PGLYRP2Q96PD5 576 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 PACSIN1Q9BY11 444 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 THAP2Q9H0W7 228 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 CRISPLD1Q9H336 500 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 PLEKHA4Q9H4M7 779 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 LRRC4Q9HBW1 653 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 DPP7Q9UHL4 492 aa8.41□□□□□ -1.06
COPS3-215ENST00000578317 FIGNL2A6NMB9 653 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 E5RJQ4 531 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 NCANO14594 1321 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 PAPSS1O43252 624 aaPredicted RBP8.4□□□□□ -1.06
COPS3-215ENST00000578317 CPNE3O75131 537 aaKnown RBP8.4□□□□□ -1.06
COPS3-215ENST00000578317 PAPLNO95428 1278 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 SEC24AO95486 1093 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 ERBB2P04626 1255 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 POU3F3P20264 500 aaPredicted RBP8.4□□□□□ -1.06
COPS3-215ENST00000578317 ABCB4P21439 1286 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 RRM1P23921 792 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 KLRC2P26717 231 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 IRS1P35568 1242 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 CLCN4P51793 760 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 MAMLD1Q13495 774 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 IFI16Q16666 785 aaKnown RBP8.4□□□□□ -1.06
COPS3-215ENST00000578317 PTPROQ16827 1216 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 MGAT5BQ3V5L5 792 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 EYSQ5T1H1 3165 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 MMS22LQ6ZRQ5 1243 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 SLC35G2Q8TBE7 412 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 SLC22A17Q8WUG5 538 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 RFFLQ8WZ73 363 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 CDCA3Q99618 268 aaPredicted RBP8.4□□□□□ -1.06
COPS3-215ENST00000578317 C11orf70Q9BRQ4 267 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 TTLL2Q9BWV7 592 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 TRIOBPQ9H2D6 2365 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 ZNF576Q9H609 170 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 SYNCQ9H7C4 482 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 ST7Q9NRC1 585 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 ASNSD1Q9NWL6 643 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 EHD2Q9NZN4 543 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 CNOT8Q9UFF9 292 aaKnown RBP8.4□□□□□ -1.06
COPS3-215ENST00000578317 LCMT1Q9UIC8 334 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 FBXW11Q9UKB1 542 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 ASB3Q9Y575 518 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 AK5Q9Y6K8 562 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 SCINQ9Y6U3 715 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 DUSP10Q9Y6W6 482 aa8.4□□□□□ -1.06
COPS3-215ENST00000578317 TMEM191CA6NGB0 347 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms