RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 SCML2Q9UQR0 700 aa13.44□□□□□ -0.26
CCDC57-211ENST00000578187 USP3Q9Y6I4 520 aa13.44□□□□□ -0.26
CCDC57-211ENST00000578187 GVINP1Q7Z2Y8 2422 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 LGALS16A8MUM7 142 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 PES1O00541 588 aaKnown RBP13.43□□□□□ -0.26
CCDC57-211ENST00000578187 XPO1O14980 1071 aaKnown RBP13.43□□□□□ -0.26
CCDC57-211ENST00000578187 CYP26A1O43174 497 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 APBB3O95704 486 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 CALCAP01258 141 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 TPM2P07951 284 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 SETSIPP0DME0 302 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 BRD2P25440 801 aaKnown RBP13.43□□□□□ -0.26
CCDC57-211ENST00000578187 PLA2G4AP47712 749 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 ZNF165P49910 485 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 COPB1P53618 953 aaKnown RBP13.43□□□□□ -0.26
CCDC57-211ENST00000578187 ATXN1P54253 815 aaKnown RBP13.43□□□□□ -0.26
CCDC57-211ENST00000578187 SLC8A3P57103 927 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 SLC7A9P82251 487 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 PDE4CQ08493 712 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 CNGA2Q16280 664 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 MEA1Q16626 185 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 ARHGAP44Q17R89 818 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 ZSCAN23Q3MJ62 389 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 PRR23CQ6ZRP0 262 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 SYT13Q7L8C5 426 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 CCDC186Q7Z3E2 898 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 ANKRD20A12PQ8NF67 263 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 RIN3Q8TB24 985 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 NACA2Q9H009 215 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 PARD6AQ9NPB6 346 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 PLCB1Q9NQ66 1216 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 C2orf42Q9NWW7 574 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 TBC1D14Q9P2M4 693 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 DNAJC12Q9UKB3 198 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 CPQQ9Y646 472 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.43□□□□□ -0.26
CCDC57-211ENST00000578187 F5P12259 2224 aa13.43□□□□□ -0.26
CCDC57-211ENST00000578187 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.42□□□□□ -0.26
CCDC57-211ENST00000578187 MED19A0JLT2 244 aaPredicted RBP13.42□□□□□ -0.26
CCDC57-211ENST00000578187 LRRC10BA6NIK2 292 aa13.42□□□□□ -0.26
CCDC57-211ENST00000578187 SMTNL1A8MU46 457 aa13.42□□□□□ -0.26
CCDC57-211ENST00000578187 TULP2O00295 520 aa13.42□□□□□ -0.26
CCDC57-211ENST00000578187 AXIN1O15169 862 aa13.42□□□□□ -0.26
CCDC57-211ENST00000578187 ADH1CP00326 375 aa13.42□□□□□ -0.26
CCDC57-211ENST00000578187 MBL2P11226 248 aaPredicted RBP13.42□□□□□ -0.26
CCDC57-211ENST00000578187 ATP1A3P13637 1013 aa13.42□□□□□ -0.26
CCDC57-211ENST00000578187 TGM1P22735 817 aa13.42□□□□□ -0.26
CCDC57-211ENST00000578187 GNA15P30679 374 aa13.42□□□□□ -0.26
CCDC57-211ENST00000578187 PXNP49023 591 aaPredicted RBP13.42□□□□□ -0.26
CCDC57-211ENST00000578187 PGFP49763 221 aa13.42□□□□□ -0.26
CCDC57-211ENST00000578187 IQCB1Q15051 598 aa13.42□□□□□ -0.26
CCDC57-211ENST00000578187 ELF2Q15723 593 aa13.42□□□□□ -0.26
CCDC57-211ENST00000578187 PREPLQ4J6C6 727 aaPredicted RBP13.42□□□□□ -0.26
CCDC57-211ENST00000578187 AASDHQ4L235 1098 aaPredicted RBP13.42□□□□□ -0.26
CCDC57-211ENST00000578187 FKBP15Q5T1M5 1219 aa13.42□□□□□ -0.26
CCDC57-211ENST00000578187 KLHDC7AQ5VTJ3 777 aa13.42□□□□□ -0.26
CCDC57-211ENST00000578187 PKN3Q6P5Z2 889 aa13.42□□□□□ -0.26
CCDC57-211ENST00000578187 C11orf74Q86VG3 221 aa13.42□□□□□ -0.26
CCDC57-211ENST00000578187 UBA3Q8TBC4 463 aa13.42□□□□□ -0.26
CCDC57-211ENST00000578187 SLC35F5Q8WV83 523 aa13.42□□□□□ -0.26
CCDC57-211ENST00000578187 DDX1Q92499 740 aaKnown RBP13.42□□□□□ -0.26
CCDC57-211ENST00000578187 HHIPQ96QV1 700 aa13.42□□□□□ -0.26
CCDC57-211ENST00000578187 LSM14BQ9BX40 385 aaKnown RBP13.42□□□□□ -0.26
CCDC57-211ENST00000578187 NAA15Q9BXJ9 866 aaKnown RBP13.42□□□□□ -0.26
CCDC57-211ENST00000578187 RNF38Q9H0F5 515 aa13.42□□□□□ -0.26
CCDC57-211ENST00000578187 GANQ9H2C0 597 aa13.42□□□□□ -0.26
CCDC57-211ENST00000578187 CYLDQ9NQC7 956 aa13.42□□□□□ -0.26
CCDC57-211ENST00000578187 TLR8Q9NR97 1041 aaKnown RBP13.42□□□□□ -0.26
CCDC57-211ENST00000578187 SIK3Q9Y2K2 1263 aa13.42□□□□□ -0.26
CCDC57-211ENST00000578187 FHOD1Q9Y613 1164 aa13.42□□□□□ -0.26
CCDC57-211ENST00000578187 DNAH14Q0VDD8 3507 aa13.42□□□□□ -0.26
CCDC57-211ENST00000578187 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.41□□□□□ -0.26
CCDC57-211ENST00000578187 M0QYV0 167 aa13.41□□□□□ -0.26
CCDC57-211ENST00000578187 COCHO43405 550 aa13.41□□□□□ -0.26
CCDC57-211ENST00000578187 RHOBTB1O94844 696 aa13.41□□□□□ -0.26
CCDC57-211ENST00000578187 UCHL3P15374 230 aa13.41□□□□□ -0.26
CCDC57-211ENST00000578187 CDK11BP21127 795 aaKnown RBP13.41□□□□□ -0.26
CCDC57-211ENST00000578187 ZXDBP98169 803 aa13.41□□□□□ -0.26
CCDC57-211ENST00000578187 DMC1Q14565 340 aa13.41□□□□□ -0.26
CCDC57-211ENST00000578187 HECTD3Q5T447 861 aa13.41□□□□□ -0.26
CCDC57-211ENST00000578187 NUDT18Q6ZVK8 323 aa13.41□□□□□ -0.26
CCDC57-211ENST00000578187 TSTD1Q8NFU3 115 aa13.41□□□□□ -0.26
CCDC57-211ENST00000578187 ZNF606Q8WXB4 792 aa13.41□□□□□ -0.26
CCDC57-211ENST00000578187 KCTD13Q8WZ19 329 aa13.41□□□□□ -0.26
CCDC57-211ENST00000578187 LINC00597Q9H2U6 94 aa13.41□□□□□ -0.26
CCDC57-211ENST00000578187 CCSER2Q9H7U1 834 aa13.41□□□□□ -0.26
CCDC57-211ENST00000578187 NMUR1Q9HB89 426 aa13.41□□□□□ -0.26
CCDC57-211ENST00000578187 FBRSL1Q9HCM7 1045 aaKnown RBP13.41□□□□□ -0.26
CCDC57-211ENST00000578187 ACP6Q9NPH0 428 aa13.41□□□□□ -0.26
CCDC57-211ENST00000578187 OSER1Q9NX31 292 aa13.41□□□□□ -0.26
CCDC57-211ENST00000578187 SMPD4Q9NXE4 827 aa13.41□□□□□ -0.26
CCDC57-211ENST00000578187 CFAP97Q9P2B7 532 aa13.41□□□□□ -0.26
CCDC57-211ENST00000578187 CHORDC1Q9UHD1 332 aaPredicted RBP13.41□□□□□ -0.26
CCDC57-211ENST00000578187 SH3BP1Q9Y3L3 701 aa13.41□□□□□ -0.26
CCDC57-211ENST00000578187 PCDHGA5Q9Y5G8 931 aa13.41□□□□□ -0.26
CCDC57-211ENST00000578187 OTOGLQ3ZCN5 2332 aa13.41□□□□□ -0.26
CCDC57-211ENST00000578187 KIAA1549LQ6ZVL6 1849 aa13.41□□□□□ -0.26
CCDC57-211ENST00000578187 SPTBN4Q9H254 2564 aa13.4□□□□□ -0.26
CCDC57-211ENST00000578187 A0A1W2PQH9 124 aa13.4□□□□□ -0.26
CCDC57-211ENST00000578187 E2F8A0AVK6 867 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms