RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 DNAJC17Q9NVM6 304 aaKnown RBP17.52■□□□□ 0.4
CDK5RAP3-206ENST00000578018 BCCIPQ9P287 314 aaKnown RBP eCLIP17.52■□□□□ 0.4
CDK5RAP3-206ENST00000578018 DNMT3LQ9UJW3 386 aa17.52■□□□□ 0.4
CDK5RAP3-206ENST00000578018 NAGPAQ9UK23 515 aa17.52■□□□□ 0.4
CDK5RAP3-206ENST00000578018 LSM7Q9UK45 103 aaKnown RBP17.52■□□□□ 0.4
CDK5RAP3-206ENST00000578018 NUDT5Q9UKK9 219 aa17.52■□□□□ 0.4
CDK5RAP3-206ENST00000578018 USP3Q9Y6I4 520 aa17.52■□□□□ 0.4
CDK5RAP3-206ENST00000578018 USP24Q9UPU5 2620 aa17.52■□□□□ 0.4
CDK5RAP3-206ENST00000578018 CEP192Q8TEP8 1941 aa17.51■□□□□ 0.39
CDK5RAP3-206ENST00000578018 CETN3O15182 167 aa17.51■□□□□ 0.39
CDK5RAP3-206ENST00000578018 TYRP14679 529 aa17.51■□□□□ 0.39
CDK5RAP3-206ENST00000578018 PSEN1P49768 467 aa17.51■□□□□ 0.39
CDK5RAP3-206ENST00000578018 MAP7D1Q3KQU3 841 aa17.51■□□□□ 0.39
CDK5RAP3-206ENST00000578018 C10orf120Q5SQS8 335 aa17.51■□□□□ 0.39
CDK5RAP3-206ENST00000578018 GRAMD4Q6IC98 578 aa17.51■□□□□ 0.39
CDK5RAP3-206ENST00000578018 Q6ZNB5 142 aa17.51■□□□□ 0.39
CDK5RAP3-206ENST00000578018 NUDT18Q6ZVK8 323 aa17.51■□□□□ 0.39
CDK5RAP3-206ENST00000578018 MIB1Q86YT6 1006 aa17.51■□□□□ 0.39
CDK5RAP3-206ENST00000578018 TTC39CQ8N584 583 aa17.51■□□□□ 0.39
CDK5RAP3-206ENST00000578018 SLC4A11Q8NBS3 891 aa17.51■□□□□ 0.39
CDK5RAP3-206ENST00000578018 SPACA7Q96KW9 195 aa17.51■□□□□ 0.39
CDK5RAP3-206ENST00000578018 RAB20Q9NX57 234 aa17.51■□□□□ 0.39
CDK5RAP3-206ENST00000578018 WDR35Q9P2L0 1181 aa17.51■□□□□ 0.39
CDK5RAP3-206ENST00000578018 STARD13Q9Y3M8 1113 aa17.51■□□□□ 0.39
CDK5RAP3-206ENST00000578018 ASCC3Q8N3C0 2202 aaKnown RBP17.51■□□□□ 0.39
CDK5RAP3-206ENST00000578018 STX10O60499 249 aa17.5■□□□□ 0.39
CDK5RAP3-206ENST00000578018 STC2O76061 302 aa17.5■□□□□ 0.39
CDK5RAP3-206ENST00000578018 ANP32AP39687 249 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP3-206ENST00000578018 PRCPP42785 496 aa17.5■□□□□ 0.39
CDK5RAP3-206ENST00000578018 PLA2G4AP47712 749 aa17.5■□□□□ 0.39
CDK5RAP3-206ENST00000578018 DHPSP49366 369 aaPredicted RBP17.5■□□□□ 0.39
CDK5RAP3-206ENST00000578018 RAD23BP54727 409 aa17.5■□□□□ 0.39
CDK5RAP3-206ENST00000578018 COBLL1Q53SF7 1204 aa17.5■□□□□ 0.39
CDK5RAP3-206ENST00000578018 EGFLAMQ63HQ2 1017 aa17.5■□□□□ 0.39
CDK5RAP3-206ENST00000578018 TPGS1Q6ZTW0 290 aa17.5■□□□□ 0.39
CDK5RAP3-206ENST00000578018 LPCAT2Q7L5N7 544 aa17.5■□□□□ 0.39
CDK5RAP3-206ENST00000578018 TADA2BQ86TJ2 420 aa17.5■□□□□ 0.39
CDK5RAP3-206ENST00000578018 ZC3H3Q8IXZ2 948 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP3-206ENST00000578018 ZNF276Q8N554 614 aa17.5■□□□□ 0.39
CDK5RAP3-206ENST00000578018 FRMD1Q8N878 549 aa17.5■□□□□ 0.39
CDK5RAP3-206ENST00000578018 TMEM176AQ96HP8 235 aa17.5■□□□□ 0.39
CDK5RAP3-206ENST00000578018 HEXIM2Q96MH2 286 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP3-206ENST00000578018 XPO6Q96QU8 1125 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP3-206ENST00000578018 LSM14BQ9BX40 385 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP3-206ENST00000578018 FAM124BQ9H5Z6 455 aaPredicted RBP17.5■□□□□ 0.39
CDK5RAP3-206ENST00000578018 RMND1Q9NWS8 449 aa17.5■□□□□ 0.39
CDK5RAP3-206ENST00000578018 CLIC5Q9NZA1 410 aa17.5■□□□□ 0.39
CDK5RAP3-206ENST00000578018 MBD1Q9UIS9 605 aaPredicted RBP17.5■□□□□ 0.39
CDK5RAP3-206ENST00000578018 CIZ1Q9ULV3 898 aaPredicted RBP17.5■□□□□ 0.39
CDK5RAP3-206ENST00000578018 PATE3B3GLJ2 98 aa17.49■□□□□ 0.39
CDK5RAP3-206ENST00000578018 SLC16A3O15427 465 aaKnown RBP17.49■□□□□ 0.39
CDK5RAP3-206ENST00000578018 RALAP11233 206 aa17.49■□□□□ 0.39
CDK5RAP3-206ENST00000578018 HOXB2P14652 356 aa17.49■□□□□ 0.39
CDK5RAP3-206ENST00000578018 GABRG2P18507 467 aa17.49■□□□□ 0.39
CDK5RAP3-206ENST00000578018 NTSR1P30989 418 aa17.49■□□□□ 0.39
CDK5RAP3-206ENST00000578018 CBWD6Q4V339 395 aa17.49■□□□□ 0.39
CDK5RAP3-206ENST00000578018 DCAF17Q5H9S7 520 aaPredicted RBP17.49■□□□□ 0.39
CDK5RAP3-206ENST00000578018 CBWD3Q5JTY5 395 aa17.49■□□□□ 0.39
CDK5RAP3-206ENST00000578018 CBWD5Q5RIA9 395 aa17.49■□□□□ 0.39
CDK5RAP3-206ENST00000578018 ZNF658Q5TYW1 1059 aaPredicted RBP17.49■□□□□ 0.39
CDK5RAP3-206ENST00000578018 ARHGAP17Q68EM7 881 aa17.49■□□□□ 0.39
CDK5RAP3-206ENST00000578018 TOGARAM2Q6ZUX3 1019 aa17.49■□□□□ 0.39
CDK5RAP3-206ENST00000578018 P2RY11Q96G91 374 aa17.49■□□□□ 0.39
CDK5RAP3-206ENST00000578018 CDK5RAP1Q96SZ6 601 aaKnown RBP17.49■□□□□ 0.39
CDK5RAP3-206ENST00000578018 CD248Q9HCU0 757 aa17.49■□□□□ 0.39
CDK5RAP3-206ENST00000578018 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.48■□□□□ 0.39
CDK5RAP3-206ENST00000578018 A0A1W2PQF6 199 aa17.48■□□□□ 0.39
CDK5RAP3-206ENST00000578018 PRRT4C9JH25 899 aa17.48■□□□□ 0.39
CDK5RAP3-206ENST00000578018 KHNYNO15037 678 aaKnown RBP17.48■□□□□ 0.39
CDK5RAP3-206ENST00000578018 KLKB1P03952 638 aa17.48■□□□□ 0.39
CDK5RAP3-206ENST00000578018 WASP42768 502 aa17.48■□□□□ 0.39
CDK5RAP3-206ENST00000578018 PTGER3P43115 390 aa17.48■□□□□ 0.39
CDK5RAP3-206ENST00000578018 PMS1P54277 932 aaKnown RBP17.48■□□□□ 0.39
CDK5RAP3-206ENST00000578018 RAB41Q5JT25 222 aa17.48■□□□□ 0.39
CDK5RAP3-206ENST00000578018 N4BP2L1Q5TBK1 243 aaPredicted RBP17.48■□□□□ 0.39
CDK5RAP3-206ENST00000578018 TCERG1LQ5VWI1 586 aa17.48■□□□□ 0.39
CDK5RAP3-206ENST00000578018 ARMCX6Q7L4S7 300 aa17.48■□□□□ 0.39
CDK5RAP3-206ENST00000578018 PIGZQ86VD9 579 aa17.48■□□□□ 0.39
CDK5RAP3-206ENST00000578018 TMEFF1Q8IYR6 380 aa17.48■□□□□ 0.39
CDK5RAP3-206ENST00000578018 PGBD3Q8N328 593 aa17.48■□□□□ 0.39
CDK5RAP3-206ENST00000578018 ENGASEQ8NFI3 743 aa17.48■□□□□ 0.39
CDK5RAP3-206ENST00000578018 SPATA20Q8TB22 786 aa17.48■□□□□ 0.39
CDK5RAP3-206ENST00000578018 PIGKQ92643 395 aa17.48■□□□□ 0.39
CDK5RAP3-206ENST00000578018 TATDN2Q93075 761 aa17.48■□□□□ 0.39
CDK5RAP3-206ENST00000578018 GSDMAQ96QA5 445 aa17.48■□□□□ 0.39
CDK5RAP3-206ENST00000578018 ACOX2Q99424 681 aa17.48■□□□□ 0.39
CDK5RAP3-206ENST00000578018 UBXN6Q9BZV1 441 aa17.48■□□□□ 0.39
CDK5RAP3-206ENST00000578018 COQ4Q9Y3A0 265 aa17.48■□□□□ 0.39
CDK5RAP3-206ENST00000578018 CACNA1EQ15878 2313 aa17.47■□□□□ 0.39
CDK5RAP3-206ENST00000578018 C4orf47A7E2U8 309 aa17.47■□□□□ 0.39
CDK5RAP3-206ENST00000578018 MAP3K13O43283 966 aa17.47■□□□□ 0.39
CDK5RAP3-206ENST00000578018 KCNK5O95279 499 aa17.47■□□□□ 0.39
CDK5RAP3-206ENST00000578018 CISD3P0C7P0 127 aa17.47■□□□□ 0.39
CDK5RAP3-206ENST00000578018 PMLP29590 882 aa17.47■□□□□ 0.39
CDK5RAP3-206ENST00000578018 DGKGP49619 791 aa17.47■□□□□ 0.39
CDK5RAP3-206ENST00000578018 FKBP3Q00688 224 aaKnown RBP17.47■□□□□ 0.39
CDK5RAP3-206ENST00000578018 BYSLQ13895 437 aaKnown RBP17.47■□□□□ 0.39
CDK5RAP3-206ENST00000578018 ANKRD40Q6AI12 368 aa17.47■□□□□ 0.39
CDK5RAP3-206ENST00000578018 CHPFQ8IZ52 775 aa17.47■□□□□ 0.39
CDK5RAP3-206ENST00000578018 ANKRD52Q8NB46 1076 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms