RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 PORCNQ9H237 461 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 NKX2-4Q9H2Z4 354 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 TRIT1Q9H3H1 467 aaKnown RBP3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 FAM96AQ9H5X1 160 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 TMEM161AQ9NX61 479 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 ALKBH4Q9NXW9 302 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 CLIC5Q9NZA1 410 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 KIAA1522Q9P206 1035 aaPredicted RBP3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 CHORDC1Q9UHD1 332 aaPredicted RBP3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 ZNHIT2Q9UHR6 403 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 MAD2L2Q9UI95 211 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 MAN1B1Q9UKM7 699 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 MRPS33Q9Y291 106 aaKnown RBP3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 STXBP5LQ9Y2K9 1186 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 A0A0G2JLL6 359 aaPredicted RBP3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 COPEO14579 308 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 KCNN4O15554 427 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 GUCY1B2O75343 617 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 SOAT2O75908 522 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 MPOP05164 745 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 ITGAVP06756 1048 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 ENO2P09104 434 aaPredicted RBP3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 OR56A5P0C7T3 313 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 TLX1P31314 330 aaPredicted RBP3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 CASRP41180 1078 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 PTGER2P43116 358 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 DDX39BQ13838 428 aaKnown RBP3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 GRM3Q14832 879 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 ALG11Q2TAA5 492 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 CRY2Q49AN0 593 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 ATP13A4Q4VNC1 1196 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 MPPE1Q53F39 396 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 TMCO4Q5TGY1 634 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 SNX30Q5VWJ9 437 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 FAM43BQ6ZT52 329 aaPredicted RBP3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 C3orf67Q6ZVT6 689 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 ACAD11Q709F0 780 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 MARK2Q7KZI7 788 aaKnown RBP3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 PRRT2Q7Z6L0 340 aaPredicted RBP3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 DDIASQ8IXT1 998 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 RCOR2Q8IZ40 523 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 NUP93Q8N1F7 819 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 NAT16Q8N8M0 369 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 LPCAT1Q8NF37 534 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 GRIN3AQ8TCU5 1115 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 PIGKQ92643 395 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 RERGQ96A58 199 aaPredicted RBP3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 PPWD1Q96BP3 646 aaKnown RBP3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 AGPAT1Q99943 283 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 UPF3AQ9H1J1 476 aaKnown RBP3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 PLEKHA4Q9H4M7 779 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 DDX4Q9NQI0 724 aaKnown RBP3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 KCTD5Q9NXV2 234 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 SAGE1Q9NXZ1 904 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 CFAP97Q9P2B7 532 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 CPSF2Q9P2I0 782 aaKnown RBP3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 SEPT3Q9UH03 358 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 ADAM28Q9UKQ2 775 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 ZKSCAN5Q9Y2L8 839 aa3.03□□□□□ -1.92
SMCHD1-203ENST00000577880 ADGRA2Q96PE1 1338 aa3.03□□□□□ -1.93
SMCHD1-203ENST00000577880 SLIT1O75093 1534 aa3.03□□□□□ -1.93
SMCHD1-203ENST00000577880 NEDD8-MDP1E9PL57 170 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 QSOX1O00391 747 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 FPGTO14772 594 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 GRM6O15303 877 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 TBL1XO60907 577 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 RTN2O75298 545 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 KATNA1O75449 491 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 SRP72O76094 671 aaKnown RBP3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 TRIM16O95361 564 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 PRNPP04156 253 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 RB1P06400 928 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 MLNP12872 115 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 JUPP14923 745 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 CYP2A7P20853 494 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 JAK1P23458 1154 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 DPP6P42658 865 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 FMO5P49326 533 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 GUCY2FP51841 1108 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 CAV1Q03135 178 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 FOXM1Q08050 763 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 ELP6Q0PNE2 266 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 CDC16Q13042 620 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 MED21Q13503 144 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 CUL2Q13617 745 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 CYP2A13Q16696 494 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 WHAMMP3Q1A5X7 153 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 KLHL38Q2WGJ6 581 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 EDRF1Q3B7T1 1238 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 CCDC38Q502W7 563 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 FUT10Q6P4F1 479 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 EFL1Q7Z2Z2 1120 aaKnown RBP3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 C11orf74Q86VG3 221 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 GAS2L3Q86XJ1 694 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 WDR75Q8IWA0 830 aaKnown RBP3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 STX19Q8N4C7 294 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 DEFB123Q8N688 67 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 PPM1NQ8N819 430 aa3.02□□□□□ -1.93
SMCHD1-203ENST00000577880 SYT2Q8N9I0 419 aaPredicted RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms