RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 CAPZA3Q96KX2 299 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 KCNK16Q96T55 309 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 HERC2P3Q9BVR0 1158 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 KCNK12Q9HB15 430 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 PARVAQ9NVD7 372 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 ABI2Q9NYB9 513 aaPredicted RBP10.56□□□□□ -0.72
CRLF3-202ENST00000577725 SMARCAL1Q9NZC9 954 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 FBXO4Q9UKT5 387 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 AMFRQ9UKV5 643 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 SCINQ9Y6U3 715 aa10.56□□□□□ -0.72
CRLF3-202ENST00000577725 SMG1Q96Q15 3661 aaKnown RBP10.55□□□□□ -0.72
CRLF3-202ENST00000577725 TMEM8BA6NDV4 472 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 OR6C75A6NL08 312 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 SRRM3A6NNA2 597 aaPredicted RBP10.55□□□□□ -0.72
CRLF3-202ENST00000577725 ZNF185O15231 689 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 SOAT2O75908 522 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 FGF18O76093 207 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 VNN2O95498 520 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 EFEMP2O95967 443 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 CPB1P15086 417 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 CYP2F1P24903 491 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 CXCR5P32302 372 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 GJC1P36383 396 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 PLA2G4AP47712 749 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 MARCKSL1P49006 195 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 HADHBP55084 474 aaKnown RBP10.55□□□□□ -0.72
CRLF3-202ENST00000577725 ZNF252P-AS1Q0IIN9 211 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 ADIGQ0VDE8 80 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 ELAVL2Q12926 359 aaKnown RBP10.55□□□□□ -0.72
CRLF3-202ENST00000577725 ZNF268Q14587 947 aaPredicted RBP10.55□□□□□ -0.72
CRLF3-202ENST00000577725 PSMD5Q16401 504 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 ATAT1Q5SQI0 421 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 PPP1R15BQ5SWA1 713 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 PLPP4Q5VZY2 271 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 PAPD7Q5XG87 772 aaKnown RBP10.55□□□□□ -0.72
CRLF3-202ENST00000577725 KIAA1841Q6NSI8 718 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 TRNP1Q6NT89 227 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 DCUN1D2Q6PH85 259 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 OLFML1Q6UWY5 402 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 SLFN11Q7Z7L1 901 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 SCN4BQ8IWT1 228 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 SCUBE3Q8IX30 993 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 DCP1BQ8IZD4 617 aaKnown RBP10.55□□□□□ -0.72
CRLF3-202ENST00000577725 ZBTB44Q8NCP5 570 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 C3orf20Q8ND61 904 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 SMARCD1Q96GM5 515 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 TMEM169Q96HH4 297 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 MFRPQ9BY79 579 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 ABCB6Q9NP58 842 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 AAASQ9NRG9 546 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 SPG21Q9NZD8 308 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 EHD2Q9NZN4 543 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 STRIP2Q9ULQ0 834 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 JRKLQ9Y4A0 524 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 ALG6Q9Y672 507 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 UNC79Q9P2D8 2635 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 PATJQ8NI35 1801 aa10.55□□□□□ -0.72
CRLF3-202ENST00000577725 TMEM191CA6NGB0 347 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 SIGLEC16A6NMB1 481 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 HHLA1C9JL84 531 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 F8VP50 259 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 H7C4K7 107 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 MYO1FO00160 1098 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 DDX3YO15523 660 aaKnown RBP10.54□□□□□ -0.72
CRLF3-202ENST00000577725 NARSO43776 548 aaKnown RBP10.54□□□□□ -0.72
CRLF3-202ENST00000577725 SPOPO43791 374 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 PROSCO94903 275 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 SOD2P04179 222 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 KRT3P12035 628 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 TCF4P15884 667 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 PSMA2P25787 234 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 CA8P35219 290 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 RFC1P35251 1148 aaPredicted RBP10.54□□□□□ -0.72
CRLF3-202ENST00000577725 SSR1P43307 286 aaKnown RBP10.54□□□□□ -0.72
CRLF3-202ENST00000577725 TKTL1P51854 596 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 SLC6A3Q01959 620 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 ADCY1Q08828 1119 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 SPEM2Q0P670 501 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 IFRD2Q12894 506 aaPredicted RBP10.54□□□□□ -0.72
CRLF3-202ENST00000577725 RPS6KA1Q15418 735 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 USP41Q3LFD5 358 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 RAB6CQ53S08 254 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 RNF19BQ6ZMZ0 732 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 C4orf50Q6ZRC1 276 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 TMEM110Q86TL2 294 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 RNF168Q8IYW5 571 aaPredicted RBP10.54□□□□□ -0.72
CRLF3-202ENST00000577725 SYCE1Q8N0S2 351 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 ATAD1Q8NBU5 361 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 COG1Q8WTW3 980 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 KRT35Q92764 455 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 OSBPL9Q96SU4 736 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 ULBP1Q9BZM6 244 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 RAB6CQ9H0N0 254 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 CRISPLD1Q9H336 500 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 LRRC4Q9HBW1 653 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 PLXNA4Q9HCM2 1894 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 MRPL47Q9HD33 250 aaKnown RBP10.54□□□□□ -0.72
CRLF3-202ENST00000577725 ZSCAN32Q9NX65 697 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 IGSF9Q9P2J2 1179 aa10.54□□□□□ -0.72
CRLF3-202ENST00000577725 WDR35Q9P2L0 1181 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms