RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 ZNF571Q7Z3V5 609 aaPredicted RBP12.95□□□□□ -0.34
RARA-208ENST00000577646 TMC6Q7Z403 805 aa12.95□□□□□ -0.34
RARA-208ENST00000577646 SLC30A5Q8TAD4 765 aa12.95□□□□□ -0.34
RARA-208ENST00000577646 CPA5Q8WXQ8 436 aa12.95□□□□□ -0.34
RARA-208ENST00000577646 MSANTD3Q96H12 275 aa12.95□□□□□ -0.34
RARA-208ENST00000577646 CYP2S1Q96SQ9 504 aa12.95□□□□□ -0.34
RARA-208ENST00000577646 KLF16Q9BXK1 252 aaPredicted RBP12.95□□□□□ -0.34
RARA-208ENST00000577646 CCSER2Q9H7U1 834 aa12.95□□□□□ -0.34
RARA-208ENST00000577646 C11orf16Q9NQ32 467 aa12.95□□□□□ -0.34
RARA-208ENST00000577646 ADAM22Q9P0K1 906 aa12.95□□□□□ -0.34
RARA-208ENST00000577646 LSM7Q9UK45 103 aaKnown RBP12.95□□□□□ -0.34
RARA-208ENST00000577646 DUSP12Q9UNI6 340 aa12.95□□□□□ -0.34
RARA-208ENST00000577646 NUP210Q8TEM1 1887 aaPredicted RBP12.95□□□□□ -0.34
RARA-208ENST00000577646 ANAPC1Q9H1A4 1944 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 OBSL1O75147 1896 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 NRG2O14511 850 aaPredicted RBP12.94□□□□□ -0.34
RARA-208ENST00000577646 CAPN9O14815 690 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 ZNF263O14978 683 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 LATS1O95835 1130 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 MYBL1P10243 752 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 GBP1P32455 592 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 NOS2P35228 1153 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 VIPR2P41587 438 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 AMPD2Q01433 879 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 USP4Q13107 963 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 ZNF77Q15935 545 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 TDRD12Q587J7 1177 aaKnown RBP12.94□□□□□ -0.34
RARA-208ENST00000577646 ACBD5Q5T8D3 534 aaPredicted RBP12.94□□□□□ -0.34
RARA-208ENST00000577646 OLFML1Q6UWY5 402 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 VITQ6UXI7 678 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 TRIM67Q6ZTA4 783 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 HTR3DQ70Z44 454 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 XYLT1Q86Y38 959 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 UNC45BQ8IWX7 931 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 SH3RF2Q8TEC5 729 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 EXOC4Q96A65 974 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 AZIN2Q96A70 460 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 FAM149B1Q96BN6 582 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 PLD4Q96BZ4 506 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 SERPINB11Q96P15 392 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 SLC2A13Q96QE2 648 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 PANX2Q96RD6 677 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 SLC22A12Q96S37 553 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 PCDHB18PQ96TA0 734 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 ISCUQ9H1K1 167 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 ABHD10Q9NUJ1 306 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 SEPT11Q9NVA2 429 aaKnown RBP12.94□□□□□ -0.34
RARA-208ENST00000577646 OSER1Q9NX31 292 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 MARCH2Q9P0N8 246 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 WNT16Q9UBV4 365 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 PAXBP1Q9Y5B6 917 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 CPQQ9Y646 472 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 WDFY4Q6ZS81 3184 aa12.94□□□□□ -0.34
RARA-208ENST00000577646 ANKRD62A6NC57 917 aa12.93□□□□□ -0.34
RARA-208ENST00000577646 GOLGA6L3A6NEY3 463 aa12.93□□□□□ -0.34
RARA-208ENST00000577646 LEFTY2O00292 366 aa12.93□□□□□ -0.34
RARA-208ENST00000577646 PRAMEF12O95522 483 aa12.93□□□□□ -0.34
RARA-208ENST00000577646 ADCY5O95622 1261 aa12.93□□□□□ -0.34
RARA-208ENST00000577646 F9P00740 461 aa12.93□□□□□ -0.34
RARA-208ENST00000577646 ERBB2P04626 1255 aa12.93□□□□□ -0.34
RARA-208ENST00000577646 SLC2A3P11169 496 aa12.93□□□□□ -0.34
RARA-208ENST00000577646 NCAM1P13591 858 aa12.93□□□□□ -0.34
RARA-208ENST00000577646 MATKP42679 507 aa12.93□□□□□ -0.34
RARA-208ENST00000577646 NR1H3Q13133 447 aa12.93□□□□□ -0.34
RARA-208ENST00000577646 MTF1Q14872 753 aa12.93□□□□□ -0.34
RARA-208ENST00000577646 C10orf76Q5T2E6 689 aa12.93□□□□□ -0.34
RARA-208ENST00000577646 MON1BQ7L1V2 547 aa12.93□□□□□ -0.34
RARA-208ENST00000577646 MCOLN2Q8IZK6 566 aa12.93□□□□□ -0.34
RARA-208ENST00000577646 C3orf20Q8ND61 904 aa12.93□□□□□ -0.34
RARA-208ENST00000577646 OSCP1Q8WVF1 389 aa12.93□□□□□ -0.34
RARA-208ENST00000577646 SHDQ96IW2 340 aa12.93□□□□□ -0.34
RARA-208ENST00000577646 KXD1Q9BQD3 176 aa12.93□□□□□ -0.34
RARA-208ENST00000577646 SMOC2Q9H3U7 446 aa12.93□□□□□ -0.34
RARA-208ENST00000577646 BRD9Q9H8M2 597 aa12.93□□□□□ -0.34
RARA-208ENST00000577646 STAP1Q9ULZ2 295 aa12.93□□□□□ -0.34
RARA-208ENST00000577646 SH3BP1Q9Y3L3 701 aa12.93□□□□□ -0.34
RARA-208ENST00000577646 MUC6Q6W4X9 2439 aa12.93□□□□□ -0.34
RARA-208ENST00000577646 TMEM221A6NGB7 291 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 SIGLEC16A6NMB1 481 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 M0R296 226 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 DDX3XO00571 662 aaKnown RBP eCLIP12.92□□□□□ -0.345e-6■■□□□ 11.5
RARA-208ENST00000577646 DAB1O75553 588 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 FYNP06241 537 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 SKILP12757 684 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 DESP17661 470 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 HARS2P49590 506 aaKnown RBP12.92□□□□□ -0.34
RARA-208ENST00000577646 PGFP49763 221 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 SIGLEC14Q08ET2 396 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 EFEMP1Q12805 493 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 PTP4A2Q12974 167 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 TRIP4Q15650 581 aaPredicted RBP12.92□□□□□ -0.34
RARA-208ENST00000577646 E4F1Q66K89 784 aaPredicted RBP12.92□□□□□ -0.34
RARA-208ENST00000577646 NUGGCQ68CJ6 796 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 WDR59Q6PJI9 974 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 MMS22LQ6ZRQ5 1243 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 FAM183BPQ6ZVS7 135 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 CCDC170Q8IYT3 715 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 ATP2A3Q93084 1043 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 NT5C3BQ969T7 300 aa12.92□□□□□ -0.34
RARA-208ENST00000577646 PBXIP1Q96AQ6 731 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms