RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 GPR158Q5T848 1215 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 SDHAF4Q5VUM1 108 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 RRAGBQ5VZM2 374 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 ZC3H14Q6PJT7 736 aaKnown RBP6.7□□□□□ -1.34
NUP88-212ENST00000576708 Q6ZS52 159 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 CD302Q8IX05 232 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 YAF2Q8IY57 180 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 LEMD2Q8NC56 503 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 ZBTB44Q8NCP5 570 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 NOC3LQ8WTT2 800 aaKnown RBP6.7□□□□□ -1.34
NUP88-212ENST00000576708 DEPDC1BQ8WUY9 529 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 ATRIPQ8WXE1 791 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 POMGNT1Q8WZA1 660 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 NELL1Q92832 810 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 HPS3Q969F9 1004 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 PSMG2Q969U7 264 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 YIPF2Q9BWQ6 316 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 STRA6Q9BX79 667 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 TGIF2Q9GZN2 237 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 ZCWPW1Q9H0M4 648 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 PCIF1Q9H4Z3 704 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 MRPL44Q9H9J2 332 aaKnown RBP6.7□□□□□ -1.34
NUP88-212ENST00000576708 PRMT8Q9NR22 394 aaPredicted RBP6.7□□□□□ -1.34
NUP88-212ENST00000576708 ZSCAN32Q9NX65 697 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 GTSE1Q9NYZ3 720 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 NCDNQ9UBB6 729 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 MAFFQ9ULX9 164 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 MRPS17Q9Y2R5 130 aaKnown RBP6.7□□□□□ -1.34
NUP88-212ENST00000576708 POLR3KQ9Y2Y1 108 aaPredicted RBP6.7□□□□□ -1.34
NUP88-212ENST00000576708 DERAQ9Y315 318 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 STYXL1Q9Y6J8 313 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 CACNA1IQ9P0X4 2223 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 ANK1P16157 1881 aa6.7□□□□□ -1.34
NUP88-212ENST00000576708 TSC2P49815 1807 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 PTPRZ1P23471 2315 aaPredicted RBP6.69□□□□□ -1.34
NUP88-212ENST00000576708 KPNA7A9QM74 516 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 CHURC1-FNTBB4DL54 471 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 MAN2B1O00754 1011 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 CHADO15335 359 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 DYRK3O43781 588 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 PRPF6O94906 941 aaKnown RBP6.69□□□□□ -1.34
NUP88-212ENST00000576708 GCNT3O95395 438 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 ITGB3P05106 788 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 HAPLN1P10915 354 aaPredicted RBP6.69□□□□□ -1.34
NUP88-212ENST00000576708 IDEP14735 1019 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 ACAT1P24752 427 aaKnown RBP6.69□□□□□ -1.34
NUP88-212ENST00000576708 POLR2BP30876 1174 aaKnown RBP6.69□□□□□ -1.34
NUP88-212ENST00000576708 MAGEA9P43362 315 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 FNTBP49356 437 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 KPNA1P52294 538 aaPredicted RBP6.69□□□□□ -1.34
NUP88-212ENST00000576708 TFAMQ00059 246 aaKnown RBP6.69□□□□□ -1.34
NUP88-212ENST00000576708 FCHO2Q0JRZ9 810 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 MPP2Q14168 576 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 L1TD1Q5T7N2 865 aaKnown RBP6.69□□□□□ -1.34
NUP88-212ENST00000576708 LMBRD2Q68DH5 695 aaPredicted RBP6.69□□□□□ -1.34
NUP88-212ENST00000576708 SLFN12LQ6IEE8 588 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 REC114Q7Z4M0 266 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 TMEM150AQ86TG1 271 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 OSTM1Q86WC4 334 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 METTL23Q86XA0 190 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 SHISA5Q8N114 240 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 THEM5Q8N1Q8 247 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 PDILTQ8N807 584 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 RIN3Q8TB24 985 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 CSGALNACT1Q8TDX6 532 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 EZH1Q92800 747 aaPredicted RBP6.69□□□□□ -1.34
NUP88-212ENST00000576708 NKD1Q969G9 470 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 ACCSQ96QU6 501 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 USP28Q96RU2 1077 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 FAM83CQ9BQN1 747 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 CBWD1Q9BRT8 395 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 PI4K2AQ9BTU6 479 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 SLC46A2Q9BY10 475 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 GPR88Q9GZN0 384 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 WNT10AQ9GZT5 417 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 ST6GALNAC4Q9H4F1 302 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 ASB7Q9H672 318 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 CCSER2Q9H7U1 834 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 FBRSQ9HAH7 460 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 PARD6AQ9NPB6 346 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 TRPV5Q9NQA5 729 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 POLR3BQ9NW08 1133 aaPredicted RBP6.69□□□□□ -1.34
NUP88-212ENST00000576708 CCDC39Q9UFE4 941 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 L1RE1Q9UN81 338 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 AGAP1Q9UPQ3 857 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 SMG5Q9UPR3 1016 aaKnown RBP6.69□□□□□ -1.34
NUP88-212ENST00000576708 MTMR6Q9Y217 621 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 C2CD2Q9Y426 696 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 PCDHGA2Q9Y5H1 932 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 SRPRBQ9Y5M8 271 aaKnown RBP6.69□□□□□ -1.34
NUP88-212ENST00000576708 SCN1AP35498 2009 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 FANCMQ8IYD8 2048 aa6.69□□□□□ -1.34
NUP88-212ENST00000576708 RIF1Q5UIP0 2472 aaKnown RBP6.68□□□□□ -1.34
NUP88-212ENST00000576708 DCHS1Q96JQ0 3298 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 SPECC1L-ADORA2AF8WAN1 911 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 FANCGO15287 622 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 ATP2C2O75185 946 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 HMGA1P17096 107 aaKnown RBP6.68□□□□□ -1.34
NUP88-212ENST00000576708 SCP2P22307 547 aa6.68□□□□□ -1.34
NUP88-212ENST00000576708 TGM1P22735 817 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms