RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 MYL3P08590 195 aa18.44■□□□□ 0.54
ATPAF1-214ENST00000576409 CTSHP09668 335 aa18.44■□□□□ 0.54
ATPAF1-214ENST00000576409 SNHG28P0DPA3 235 aa18.44■□□□□ 0.54
ATPAF1-214ENST00000576409 FDX1P10109 184 aa18.44■□□□□ 0.54
ATPAF1-214ENST00000576409 CHRNB2P17787 502 aa18.44■□□□□ 0.54
ATPAF1-214ENST00000576409 DAB2P98082 770 aa18.44■□□□□ 0.54
ATPAF1-214ENST00000576409 PTK2BQ14289 1009 aa18.44■□□□□ 0.54
ATPAF1-214ENST00000576409 ZACNQ401N2 412 aa18.44■□□□□ 0.54
ATPAF1-214ENST00000576409 AGKQ53H12 422 aa18.44■□□□□ 0.54
ATPAF1-214ENST00000576409 SPOUT1Q5T280 376 aaKnown RBP18.44■□□□□ 0.54
ATPAF1-214ENST00000576409 TDRD5Q8NAT2 981 aaKnown RBP18.44■□□□□ 0.54
ATPAF1-214ENST00000576409 ASAP3Q8TDY4 903 aa18.44■□□□□ 0.54
ATPAF1-214ENST00000576409 DACT3Q96B18 629 aaPredicted RBP18.44■□□□□ 0.54
ATPAF1-214ENST00000576409 VCPIP1Q96JH7 1222 aa18.44■□□□□ 0.54
ATPAF1-214ENST00000576409 AP5M1Q9H0R1 490 aa18.44■□□□□ 0.54
ATPAF1-214ENST00000576409 GGA3Q9NZ52 723 aa18.44■□□□□ 0.54
ATPAF1-214ENST00000576409 WRAP73Q9P2S5 460 aaPredicted RBP18.44■□□□□ 0.54
ATPAF1-214ENST00000576409 ARHGEF37A1IGU5 675 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 H0YGN5 161 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 C2CD2LO14523 706 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 ETFBP38117 255 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 GTF2A2P52657 109 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 R3HDM1Q15032 1099 aaKnown RBP18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 HELQQ8TDG4 1101 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 VPS33BQ9H267 617 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 AFF4Q9UHB7 1163 aaKnown RBP18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 CORO1CQ9ULV4 474 aaPredicted RBP18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 NFS1Q9Y697 457 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 APOC4-APOC2K7ER74 178 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 ALOX15BO15296 676 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 APOC2P02655 101 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 LAMTOR4Q0VGL1 99 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 POU6F1Q14863 301 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 ZC3H12AQ5D1E8 599 aaKnown RBP18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 TRIM15Q9C019 465 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 ZNF518BQ9C0D4 1074 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 SMARCAD1Q9H4L7 1026 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 DCDC2Q9UHG0 476 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 WASF2Q9Y6W5 498 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 hCG_1818297A0A087WSY0 165 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 TM4SF1P30408 202 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 HDAC4P56524 1084 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 USP4Q13107 963 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 MPP3Q13368 585 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 RIPK1Q13546 671 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 TEDDM1Q5T9Z0 273 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 ACSS3Q9H6R3 686 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 STXBP5LQ9Y2K9 1186 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 FAM208AQ9UK61 1670 aaKnown RBP18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 NID2Q14112 1375 aa18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 ASTN2O75129 1339 aaPredicted RBP18.43■□□□□ 0.54
ATPAF1-214ENST00000576409 A0A096LPK6 155 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 DYNC1LI2O43237 492 aaPredicted RBP18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 MGEA5O60502 916 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 VDRP11473 427 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 PTPN7P35236 360 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 NAGLUP54802 743 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 PEX6Q13608 980 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 FAM83EQ2M2I3 478 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 MPZL3Q6UWV2 235 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 GLIS1Q8NBF1 620 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 SPC25Q9HBM1 224 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 PPME1Q9Y570 386 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 XRN1Q8IZH2 1706 aaKnown RBP18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 ACAT1P24752 427 aaKnown RBP18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 ARMC3Q5W041 872 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 FBXO16Q8IX29 292 aaPredicted RBP18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 PIWIL2Q8TC59 973 aaKnown RBP18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 LRMDAQ9H2I8 198 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 SP110Q9HB58 689 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 NKX1-2Q9UD57 310 aaPredicted RBP18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 TMEM59LQ9UK28 342 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 MICAL2O94851 1124 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 LSM8O95777 96 aaKnown RBP18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 CST3P01034 146 aaPredicted RBP18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 CSHL1Q14406 222 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 ZBTB49Q6ZSB9 765 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 UCMAQ8WVF2 138 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 BSNDQ8WZ55 320 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 IDI2Q9BXS1 227 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 A1CFQ9NQ94 594 aaKnown RBP18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 PRMT7Q9NVM4 692 aaPredicted RBP18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 CCDC167Q9P0B6 97 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 ACTL7BQ9Y614 415 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 ANPEPP15144 967 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 HOXD13P35453 343 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 IREB2P48200 963 aaKnown RBP18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 BTBD8Q5XKL5 378 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 C6orf89Q6UWU4 347 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 FRA10AC1Q70Z53 315 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 WDR49Q8IV35 697 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 KYQ8NBH2 561 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 RBM15BQ8NDT2 890 aaKnown RBP18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 OPTNQ96CV9 577 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 PCDHA2Q9Y5H9 948 aa18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 TIMM13Q9Y5L4 95 aaPredicted RBP18.42■□□□□ 0.54
ATPAF1-214ENST00000576409 CD48P09326 243 aa18.41■□□□□ 0.54
ATPAF1-214ENST00000576409 UBAP2Q5T6F2 1119 aaKnown RBP18.41■□□□□ 0.54
ATPAF1-214ENST00000576409 EGFL8Q99944 293 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms