RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	EFHB	Q8N7U6	833 aa		12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	CMAS	Q8NFW8	434 aa	Predicted RBP	12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	FAM172A	Q8WUF8	416 aa		12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	EDEM1	Q92611	657 aa		12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	TBCB	Q99426	244 aa		12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	TUBB2B	Q9BVA1	445 aa		12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	TLR10	Q9BXR5	811 aa		12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	TTYH1	Q9H313	450 aa	Predicted RBP	12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	GOLPH3	Q9H4A6	298 aa		12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	OSER1	Q9NX31	292 aa		12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	PCDHA3	Q9Y5H8	950 aa		12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	PDE4DIP	Q5VU43	2346 aa		12.42	□□□□□ -0.42
PRPF8-212	ENST00000575116	CCDC195	A0A1B0GUA6	201 aa		12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116		M0QYT0	321 aa		12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	CES2	O00748	559 aa		12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	CCL16	O15467	120 aa		12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	NCK2	O43639	380 aa		12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	TRUB2	O95900	331 aa	Known RBP	12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	IGLV3-25	P01717	112 aa		12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	KRT7	P08729	469 aa		12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	RDX	P35241	583 aa	Known RBP	12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	PGF	P49763	221 aa		12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	PEX5	P50542	639 aa		12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	KPNA1	P52294	538 aa	Predicted RBP	12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	AIF1	P55008	147 aa		12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	HDAC4	P56524	1084 aa		12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	DEUP1	Q05D60	604 aa		12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	HYAL1	Q12794	435 aa		12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	NNT	Q13423	1086 aa		12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	EIF4EBP2	Q13542	120 aa	Predicted RBP	12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	BOLA3	Q53S33	107 aa		12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	TCEAL5	Q5H9L2	206 aa		12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	HECTD3	Q5T447	861 aa		12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	SND1	Q7KZF4	910 aa	Known RBP eCLIP	12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	RSRC2	Q7L4I2	434 aa	Known RBP	12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	TMC8	Q8IU68	726 aa		12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	PSTK	Q8IV42	348 aa	Known RBP	12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	DQX1	Q8TE96	717 aa	Known RBP	12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	SERPINB11	Q96P15	392 aa		12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	SMOC2	Q9H3U7	446 aa		12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	SFXN1	Q9H9B4	322 aa		12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	IL21	Q9HBE4	155 aa		12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	ZNF334	Q9HCZ1	680 aa	Predicted RBP	12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	ASAH2	Q9NR71	780 aa		12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	DDX56	Q9NY93	547 aa	Known RBP	12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	ZMYM5	Q9UJ78	669 aa		12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	USP18	Q9UMW8	372 aa		12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	UST	Q9Y2C2	406 aa		12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	HYOU1	Q9Y4L1	999 aa		12.41	□□□□□ -0.42
PRPF8-212	ENST00000575116	SPDYE4	A6NLX3	237 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	ENC1	O14682	589 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	ZNF197	O14709	1029 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	DDX3Y	O15523	660 aa	Known RBP	12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	PRPSAP2	O60256	369 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	TLR5	O60602	858 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	RFPL2	O75678	378 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	ATP1A1	P05023	1023 aa	Known RBP	12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	SLC2A3	P11169	496 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	HOXB8	P17481	243 aa	Predicted RBP	12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	TCP1	P17987	556 aa	Known RBP	12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	MIP	P30301	263 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	ATP5C1	P36542	298 aa	Known RBP	12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	SSR1	P43307	286 aa	Known RBP	12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	CXCR3	P49682	368 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	RWDD2B	P57060	319 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	TAS2R40	P59535	323 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	SLC25A11	Q02978	314 aa	Known RBP	12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	MTA1	Q13330	715 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	ADAM15	Q13444	863 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	GRIN2C	Q14957	1233 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	CDO1	Q16878	200 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	SH3PXD2A	Q5TCZ1	1133 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	ZNF697	Q5TEC3	545 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	OTUD1	Q5VV17	481 aa	Predicted RBP	12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	GPR153	Q6NV75	609 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	TMEM150A	Q86TG1	271 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	TEKT4	Q8WW24	435 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	ZNF707	Q96C28	371 aa	Predicted RBP	12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	PBK	Q96KB5	322 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	GCNA	Q96QF7	691 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	CORO1B	Q9BR76	489 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	ADAM33	Q9BZ11	813 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	PRDM12	Q9H4Q4	367 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	DDIT4	Q9NX09	232 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	DNMT3B	Q9UBC3	853 aa	Known RBP	12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	DNMT3L	Q9UJW3	386 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	SNX12	Q9UMY4	172 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	TLR6	Q9Y2C9	796 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	SAR1B	Q9Y6B6	198 aa		12.4	□□□□□ -0.42
PRPF8-212	ENST00000575116	CLUH	O75153	1309 aa		12.39	□□□□□ -0.43
PRPF8-212	ENST00000575116	MDM4	O15151	490 aa		12.39	□□□□□ -0.43
PRPF8-212	ENST00000575116	FANCG	O15287	622 aa		12.39	□□□□□ -0.43
PRPF8-212	ENST00000575116	IRAK2	O43187	625 aa		12.39	□□□□□ -0.43
PRPF8-212	ENST00000575116	TADA3	O75528	432 aa		12.39	□□□□□ -0.43
PRPF8-212	ENST00000575116	OAS1	P00973	400 aa	Known RBP	12.39	□□□□□ -0.43
PRPF8-212	ENST00000575116	RHO	P08100	348 aa		12.39	□□□□□ -0.43
PRPF8-212	ENST00000575116	TFE3	P19532	575 aa	Predicted RBP	12.39	□□□□□ -0.43
PRPF8-212	ENST00000575116	DDX6	P26196	483 aa	Known RBP eCLIP	12.39	□□□□□ -0.43
PRPF8-212	ENST00000575116	GABRR2	P28476	465 aa		12.39	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms