RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 TBC1D12O60347 775 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 TCEA3O75764 348 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 DCTN3O75935 186 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 HAUS5O94927 633 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 ERBB2P04626 1255 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 RPL22P35268 128 aaKnown RBP8.84□□□□□ -0.99
RPAIN-215ENST00000575112 FKBP1AP62942 108 aaKnown RBP8.84□□□□□ -0.99
RPAIN-215ENST00000575112 FAAP100Q0VG06 881 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 UBAP2LQ14157 1087 aaKnown RBP8.84□□□□□ -0.99
RPAIN-215ENST00000575112 CFAP157Q5JU67 520 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 MPZL3Q6UWV2 235 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 PID1Q7Z2X4 250 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 PCGF5Q86SE9 256 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 TEX9Q8N6V9 391 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 POU5F2Q8N7G0 328 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 RBM15BQ8NDT2 890 aaKnown RBP8.84□□□□□ -0.99
RPAIN-215ENST00000575112 STKLD1Q8NE28 680 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 OR6J1Q8NGC5 347 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 DNAJB3Q8WWF6 145 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 SGF29Q96ES7 293 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 PAFAH2Q99487 392 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 CXCL16Q9H2A7 254 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 ATXN3LQ9H3M9 355 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 TUT1Q9H6E5 874 aaKnown RBP8.84□□□□□ -0.99
RPAIN-215ENST00000575112 COMMD10Q9Y6G5 202 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 NRAPQ86VF7 1730 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 SLX4Q8IY92 1834 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 B2RBV5 119 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 KBTBD13C9JR72 458 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 CFLARO15519 480 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 MAFGO15525 162 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 LIASO43766 372 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 TMEM63AO94886 807 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 EFNA5P52803 228 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 LMNB2Q03252 620 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 CCNG2Q16589 344 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 MTHFD1LQ6UB35 978 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 PRPF39Q86UA1 669 aaKnown RBP8.84□□□□□ -0.99
RPAIN-215ENST00000575112 MAP7D3Q8IWC1 876 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 PYROXD2Q8N2H3 581 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 MCUQ8NE86 351 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 ACO2Q99798 780 aaKnown RBP8.84□□□□□ -0.99
RPAIN-215ENST00000575112 GORASP1Q9BQQ3 440 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 EBF4Q9BQW3 602 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 THTPAQ9BU02 230 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 SMARCAD1Q9H4L7 1026 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 ETNK2Q9NVF9 386 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 ASNSD1Q9NWL6 643 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 LYNP07948 512 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 DLDP09622 509 aaKnown RBP8.84□□□□□ -0.99
RPAIN-215ENST00000575112 ADORA2AP29274 412 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 GRIA1P42261 906 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 SLC34A1Q06495 639 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 MXD4Q14582 209 aaPredicted RBP8.84□□□□□ -0.99
RPAIN-215ENST00000575112 CNPY1Q3B7I2 92 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 KBTBD12Q3ZCT8 623 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 WASHC2DQ5SRD0 308 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 ARMCX2Q7L311 632 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 CROCCP2Q86T23 111 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 SPNS2Q8IVW8 549 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 BRSK2Q8IWQ3 736 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 C1orf127Q8N9H9 656 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 GSTCDQ8NEC7 633 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 EXT2Q93063 718 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 SCYL1Q96KG9 808 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 PCYT2Q99447 389 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 MANSC1Q9H8J5 431 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 SCOCQ9UIL1 159 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 AK5Q9Y6K8 562 aa8.84□□□□□ -0.99
RPAIN-215ENST00000575112 SIPA1L1O43166 1804 aa8.84□□□□□ -1
RPAIN-215ENST00000575112 CCL15-CCL14A0A0B4J2E2 113 aa8.83□□□□□ -1
RPAIN-215ENST00000575112 NEMP1O14524 444 aa8.83□□□□□ -1
RPAIN-215ENST00000575112 FCHO1O14526 889 aa8.83□□□□□ -1
RPAIN-215ENST00000575112 DNALI1O14645 258 aaPredicted RBP8.83□□□□□ -1
RPAIN-215ENST00000575112 PRPF4O43172 522 aaKnown RBP eCLIP8.83□□□□□ -1
RPAIN-215ENST00000575112 KRT7P08729 469 aa8.83□□□□□ -1
RPAIN-215ENST00000575112 ARF4P18085 180 aaPredicted RBP8.83□□□□□ -1
RPAIN-215ENST00000575112 HOXA7P31268 230 aaPredicted RBP8.83□□□□□ -1
RPAIN-215ENST00000575112 PGM1P36871 562 aa8.83□□□□□ -1
RPAIN-215ENST00000575112 CCL15Q16663 113 aa8.83□□□□□ -1
RPAIN-215ENST00000575112 SLC45A4Q5BKX6 768 aa8.83□□□□□ -1
RPAIN-215ENST00000575112 RASIP1Q5U651 963 aa8.83□□□□□ -1
RPAIN-215ENST00000575112 ATG14Q6ZNE5 492 aa8.83□□□□□ -1
RPAIN-215ENST00000575112 MON1BQ7L1V2 547 aa8.83□□□□□ -1
RPAIN-215ENST00000575112 POLNQ7Z5Q5 900 aa8.83□□□□□ -1
RPAIN-215ENST00000575112 ARID3BQ8IVW6 561 aaPredicted RBP8.83□□□□□ -1
RPAIN-215ENST00000575112 SCN4BQ8IWT1 228 aa8.83□□□□□ -1
RPAIN-215ENST00000575112 BBOF1Q8ND07 529 aa8.83□□□□□ -1
RPAIN-215ENST00000575112 REPS2Q8NFH8 660 aa8.83□□□□□ -1
RPAIN-215ENST00000575112 MZB1Q8WU39 189 aa8.83□□□□□ -1
RPAIN-215ENST00000575112 GRAMD1AQ96CP6 724 aa8.83□□□□□ -1
RPAIN-215ENST00000575112 TMEM176AQ96HP8 235 aa8.83□□□□□ -1
RPAIN-215ENST00000575112 CELF6Q96J87 481 aaKnown RBP8.83□□□□□ -1
RPAIN-215ENST00000575112 TLE6Q9H808 572 aa8.83□□□□□ -1
RPAIN-215ENST00000575112 ERAP1Q9NZ08 941 aa8.83□□□□□ -1
RPAIN-215ENST00000575112 KLHL8Q9P2G9 620 aaPredicted RBP8.83□□□□□ -1
RPAIN-215ENST00000575112 STOML1Q9UBI4 398 aa8.83□□□□□ -1
RPAIN-215ENST00000575112 LRCH1Q9Y2L9 728 aa8.83□□□□□ -1
RPAIN-215ENST00000575112 FOCADQ5VW36 1801 aa8.83□□□□□ -1
RPAIN-215ENST00000575112 LRCH4O75427 683 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms