RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 KIAA0754O94854 1291 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 GHRP10912 638 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 DRD4P21917 467 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 SSTR1P30872 391 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 NDUFV1P49821 464 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 GPX6P59796 221 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 TDRPQ86YL5 185 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 KCTD13Q8WZ19 329 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 MRRFQ96E11 262 aaKnown RBP14.6□□□□□ -0.07
VPS33B-208ENST00000574755 SYT15Q9BQS2 421 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 CCDC134Q9H6E4 229 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 CRTAC1Q9NQ79 661 aa14.6□□□□□ -0.07
VPS33B-208ENST00000574755 CLUHO75153 1309 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 SYNJ2BP-COX16A0A087WUM0 186 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 BCLAF3A2AJT9 711 aaKnown RBP14.59□□□□□ -0.07
VPS33B-208ENST00000574755 DAB1O75553 588 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 PRKAR2AP13861 404 aaKnown RBP14.59□□□□□ -0.07
VPS33B-208ENST00000574755 ZFXP17010 805 aaPredicted RBP14.59□□□□□ -0.07
VPS33B-208ENST00000574755 CORO7P57737 925 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 NKX3-2P78367 333 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 C3orf62Q6ZUJ4 267 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 PALM2Q8IXS6 379 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 LRRN4Q8WUT4 740 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 MAML1Q92585 1016 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 SEC16BQ96JE7 1060 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 CSPG4P5Q96PW8 444 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 KCTD15Q96SI1 283 aaPredicted RBP14.59□□□□□ -0.07
VPS33B-208ENST00000574755 PAAF1Q9BRP4 392 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 MLXIPLQ9NP71 852 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 MTMR10Q9NXD2 777 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 COX16Q9P0S2 106 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 ACTL7BQ9Y614 415 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 CASP8AP2Q9UKL3 1982 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 VIMP08670 466 aaKnown RBP14.59□□□□□ -0.07
VPS33B-208ENST00000574755 ELNP15502 786 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 KRT15P19012 456 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 NOS2P35228 1153 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 ARL4AP40617 200 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 TKTL1P51854 596 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 GBE1Q04446 702 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 NR1H3Q13133 447 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 KCNJ11Q14654 390 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 CACNA2D3Q8IZS8 1091 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 PYROXD2Q8N2H3 581 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 RTP4Q96DX8 246 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 PCED1BQ96HM7 432 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 CABS1Q96KC9 395 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 WDR83Q9BRX9 315 aaKnown RBP14.59□□□□□ -0.07
VPS33B-208ENST00000574755 PPCSQ9HAB8 311 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 STAP1Q9ULZ2 295 aa14.59□□□□□ -0.07
VPS33B-208ENST00000574755 TDRD15B5MCY1 1934 aaKnown RBP14.58□□□□□ -0.08
VPS33B-208ENST00000574755 MYBPHLA2RUH7 354 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 CHADO15335 359 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 MGEA5O60502 916 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 AP1G2O75843 785 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 ALDH1A1P00352 501 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 POMCP01189 267 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 GOT1P17174 413 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 RPL9P32969 192 aaKnown RBP14.58□□□□□ -0.08
VPS33B-208ENST00000574755 GEMIN4P57678 1058 aaKnown RBP14.58□□□□□ -0.08
VPS33B-208ENST00000574755 PITX1P78337 314 aaPredicted RBP14.58□□□□□ -0.08
VPS33B-208ENST00000574755 UPP1Q16831 310 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 PPP1R21Q6ZMI0 780 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 CDKL3Q8IVW4 592 aaPredicted RBP14.58□□□□□ -0.08
VPS33B-208ENST00000574755 C10orf67Q8IYJ2 551 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 LRRC34Q8IZ02 419 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 KLC2Q9H0B6 622 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 SLC24A2Q9UI40 661 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 RABGEF1Q9UJ41 708 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 GGA2Q9UJY4 613 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 CHMP2BQ9UQN3 213 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 NOD1Q9Y239 953 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 ATXN2Q99700 1313 aaKnown RBP14.58□□□□□ -0.08
VPS33B-208ENST00000574755 M0QYT0 321 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 ATP2A2P16615 1042 aaKnown RBP14.58□□□□□ -0.08
VPS33B-208ENST00000574755 NR2C2P49116 596 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 RAB27AP51159 221 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 RABGGTBP53611 331 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 IFT88Q13099 833 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 MPP2Q14168 576 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 PAN2Q504Q3 1202 aaKnown RBP14.58□□□□□ -0.08
VPS33B-208ENST00000574755 FAXCQ5TGI0 409 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 ARHGEF18Q6ZSZ5 1173 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 MRPL10Q7Z7H8 261 aaKnown RBP14.58□□□□□ -0.08
VPS33B-208ENST00000574755 FAM35AQ86V20 835 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 TRABD2AQ86V40 505 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 CCDC33Q8N5R6 958 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 KCNK16Q96T55 309 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 POPDC2Q9HBU9 364 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 NKIRAS1Q9NYS0 192 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 PSMC3IPQ9P2W1 217 aaPredicted RBP14.58□□□□□ -0.08
VPS33B-208ENST00000574755 ZMYND8Q9ULU4 1186 aaPredicted RBP14.58□□□□□ -0.08
VPS33B-208ENST00000574755 FZD10Q9ULW2 581 aa14.58□□□□□ -0.08
VPS33B-208ENST00000574755 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.58□□□□□ -0.08
VPS33B-208ENST00000574755 CAPN9O14815 690 aa14.57□□□□□ -0.08
VPS33B-208ENST00000574755 TRIM66O15016 1216 aa14.57□□□□□ -0.08
VPS33B-208ENST00000574755 SLC10A2Q12908 348 aaPredicted RBP14.57□□□□□ -0.08
VPS33B-208ENST00000574755 NME3Q13232 169 aa14.57□□□□□ -0.08
VPS33B-208ENST00000574755 PKN2Q16513 984 aaKnown RBP14.57□□□□□ -0.08
VPS33B-208ENST00000574755 TIGD5Q53EQ6 642 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms