RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 LRRC69Q6ZNQ3 347 aa12.62□□□□□ -0.39
CTNS-208ENST00000574218 HTR3DQ70Z44 454 aa12.62□□□□□ -0.39
CTNS-208ENST00000574218 BRAPQ7Z569 592 aa12.62□□□□□ -0.39
CTNS-208ENST00000574218 METTL3Q86U44 580 aaKnown RBP12.62□□□□□ -0.39
CTNS-208ENST00000574218 CBWD2Q8IUF1 395 aa12.62□□□□□ -0.39
CTNS-208ENST00000574218 CCDC65Q8IXS2 484 aa12.62□□□□□ -0.39
CTNS-208ENST00000574218 SCAMP5Q8TAC9 235 aa12.62□□□□□ -0.39
CTNS-208ENST00000574218 ADAM32Q8TC27 787 aa12.62□□□□□ -0.39
CTNS-208ENST00000574218 PRCCQ92733 491 aaPredicted RBP12.62□□□□□ -0.39
CTNS-208ENST00000574218 SMARCD1Q96GM5 515 aa12.62□□□□□ -0.39
CTNS-208ENST00000574218 EPSTI1Q96J88 318 aa12.62□□□□□ -0.39
CTNS-208ENST00000574218 TNIP3Q96KP6 325 aa12.62□□□□□ -0.39
CTNS-208ENST00000574218 FBXO44Q9H4M3 255 aa12.62□□□□□ -0.39
CTNS-208ENST00000574218 IL21RQ9HBE5 538 aa12.62□□□□□ -0.39
CTNS-208ENST00000574218 PANK4Q9NVE7 773 aa12.62□□□□□ -0.39
CTNS-208ENST00000574218 MARK1Q9P0L2 795 aa12.62□□□□□ -0.39
CTNS-208ENST00000574218 NXF1Q9UBU9 619 aaKnown RBP12.62□□□□□ -0.39
CTNS-208ENST00000574218 HCN2Q9UL51 889 aa12.62□□□□□ -0.39
CTNS-208ENST00000574218 FNDC3AQ9Y2H6 1198 aaKnown RBP12.62□□□□□ -0.39
CTNS-208ENST00000574218 STON1Q9Y6Q2 735 aa12.62□□□□□ -0.39
CTNS-208ENST00000574218 KNTC1P50748 2209 aa12.61□□□□□ -0.39
CTNS-208ENST00000574218 A0A087WV48 116 aa12.61□□□□□ -0.39
CTNS-208ENST00000574218 PRRT4C9JH25 899 aa12.61□□□□□ -0.39
CTNS-208ENST00000574218 E9PAM4 449 aa12.61□□□□□ -0.39
CTNS-208ENST00000574218 PHACTR2O75167 634 aa12.61□□□□□ -0.39
CTNS-208ENST00000574218 NEFLP07196 543 aa12.61□□□□□ -0.39
CTNS-208ENST00000574218 ATXN1LP0C7T5 689 aaKnown RBP12.61□□□□□ -0.39
CTNS-208ENST00000574218 TRIM21P19474 475 aaKnown RBP12.61□□□□□ -0.39
CTNS-208ENST00000574218 ATP5C1P36542 298 aaKnown RBP12.61□□□□□ -0.39
CTNS-208ENST00000574218 CDH8P55286 799 aa12.61□□□□□ -0.39
CTNS-208ENST00000574218 FUT11Q495W5 492 aa12.61□□□□□ -0.39
CTNS-208ENST00000574218 CCDC73Q6ZRK6 1079 aa12.61□□□□□ -0.39
CTNS-208ENST00000574218 FAM35AQ86V20 835 aa12.61□□□□□ -0.39
CTNS-208ENST00000574218 PIP4K2CQ8TBX8 421 aa12.61□□□□□ -0.39
CTNS-208ENST00000574218 BHMTQ93088 406 aa12.61□□□□□ -0.39
CTNS-208ENST00000574218 SYAP1Q96A49 352 aaPredicted RBP12.61□□□□□ -0.39
CTNS-208ENST00000574218 DNAJC19Q96DA6 116 aa12.61□□□□□ -0.39
CTNS-208ENST00000574218 SIPA1Q96FS4 1042 aa12.61□□□□□ -0.39
CTNS-208ENST00000574218 NUP58Q9BVL2 599 aa12.61□□□□□ -0.39
CTNS-208ENST00000574218 ITM2CQ9NQX7 267 aa12.61□□□□□ -0.39
CTNS-208ENST00000574218 TMEM30AQ9NV96 361 aa12.61□□□□□ -0.39
CTNS-208ENST00000574218 HSPBP1Q9NZL4 362 aa12.61□□□□□ -0.39
CTNS-208ENST00000574218 USP36Q9P275 1121 aaKnown RBP12.61□□□□□ -0.39
CTNS-208ENST00000574218 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.61□□□□□ -0.39
CTNS-208ENST00000574218 SMC3Q9UQE7 1217 aa12.61□□□□□ -0.39
CTNS-208ENST00000574218 CELSR3Q9NYQ7 3312 aa12.6□□□□□ -0.39
CTNS-208ENST00000574218 A0A1B0GVT2 93 aa12.6□□□□□ -0.39
CTNS-208ENST00000574218 METTL12A8MUP2 240 aa12.6□□□□□ -0.39
CTNS-208ENST00000574218 WASH3PC4AMC7 463 aa12.6□□□□□ -0.39
CTNS-208ENST00000574218 TK2O00142 265 aa12.6□□□□□ -0.39
CTNS-208ENST00000574218 TNFSF14O43557 240 aa12.6□□□□□ -0.39
CTNS-208ENST00000574218 AP1G2O75843 785 aa12.6□□□□□ -0.39
CTNS-208ENST00000574218 HLA-EP13747 358 aa12.6□□□□□ -0.39
CTNS-208ENST00000574218 STAT6P42226 847 aa12.6□□□□□ -0.39
CTNS-208ENST00000574218 GRK6P43250 576 aa12.6□□□□□ -0.39
CTNS-208ENST00000574218 TPMTP51580 245 aa12.6□□□□□ -0.39
CTNS-208ENST00000574218 AFF3P51826 1226 aaKnown RBP12.6□□□□□ -0.39
CTNS-208ENST00000574218 ARID5AQ03989 594 aa12.6□□□□□ -0.39
CTNS-208ENST00000574218 TMPRSS6Q8IU80 811 aa12.6□□□□□ -0.39
CTNS-208ENST00000574218 RDH13Q8NBN7 331 aa12.6□□□□□ -0.39
CTNS-208ENST00000574218 BAHD1Q8TBE0 780 aaPredicted RBP12.6□□□□□ -0.39
CTNS-208ENST00000574218 SLC39A7Q92504 469 aa12.6□□□□□ -0.39
CTNS-208ENST00000574218 WBP2Q969T9 261 aa12.6□□□□□ -0.39
CTNS-208ENST00000574218 CCDC127Q96BQ5 260 aa12.6□□□□□ -0.39
CTNS-208ENST00000574218 NXPE2Q96DL1 559 aa12.6□□□□□ -0.39
CTNS-208ENST00000574218 KCNK16Q96T55 309 aa12.6□□□□□ -0.39
CTNS-208ENST00000574218 CGRRF1Q99675 332 aa12.6□□□□□ -0.39
CTNS-208ENST00000574218 CD248Q9HCU0 757 aa12.6□□□□□ -0.39
CTNS-208ENST00000574218 ASH1LQ9NR48 2969 aaKnown RBP12.6□□□□□ -0.39
CTNS-208ENST00000574218 KRT82Q9NSB4 513 aa12.6□□□□□ -0.39
CTNS-208ENST00000574218 EIF2B4Q9UI10 523 aaKnown RBP12.6□□□□□ -0.39
CTNS-208ENST00000574218 MUC22E2RYF6 1773 aaPredicted RBP12.6□□□□□ -0.39
CTNS-208ENST00000574218 MYLKQ15746 1914 aa12.6□□□□□ -0.39
CTNS-208ENST00000574218 FAM149AA5PLN7 773 aa12.59□□□□□ -0.39
CTNS-208ENST00000574218 CST3P01034 146 aaPredicted RBP12.59□□□□□ -0.39
CTNS-208ENST00000574218 ZDHHC11BP0C7U3 371 aa12.59□□□□□ -0.39
CTNS-208ENST00000574218 ATICP31939 592 aa12.59□□□□□ -0.39
CTNS-208ENST00000574218 HNF1BP35680 557 aa12.59□□□□□ -0.39
CTNS-208ENST00000574218 CCT8P50990 548 aa12.59□□□□□ -0.39
CTNS-208ENST00000574218 SNRNP35Q16560 246 aaKnown RBP12.59□□□□□ -0.39
CTNS-208ENST00000574218 LARP1BQ659C4 914 aaKnown RBP12.59□□□□□ -0.39
CTNS-208ENST00000574218 ADAT2Q7Z6V5 191 aaKnown RBP12.59□□□□□ -0.39
CTNS-208ENST00000574218 TADA2BQ86TJ2 420 aa12.59□□□□□ -0.39
CTNS-208ENST00000574218 CACUL1Q86Y37 369 aa12.59□□□□□ -0.39
CTNS-208ENST00000574218 KLF16Q9BXK1 252 aaPredicted RBP12.59□□□□□ -0.39
CTNS-208ENST00000574218 PCED1AQ9H1Q7 454 aa12.59□□□□□ -0.39
CTNS-208ENST00000574218 TOR4AQ9NXH8 423 aa12.59□□□□□ -0.39
CTNS-208ENST00000574218 PLK2Q9NYY3 685 aa12.59□□□□□ -0.39
CTNS-208ENST00000574218 FTSJ1Q9UET6 329 aa12.59□□□□□ -0.39
CTNS-208ENST00000574218 ZNF510Q9Y2H8 683 aa12.59□□□□□ -0.39
CTNS-208ENST00000574218 NME7Q9Y5B8 376 aa12.59□□□□□ -0.39
CTNS-208ENST00000574218 BPTFQ12830 3046 aa12.59□□□□□ -0.39
CTNS-208ENST00000574218 NUMA1Q14980 2115 aa12.59□□□□□ -0.39
CTNS-208ENST00000574218 FRMD3A2A2Y4 597 aa12.58□□□□□ -0.4
CTNS-208ENST00000574218 CAPN9O14815 690 aa12.58□□□□□ -0.4
CTNS-208ENST00000574218 RRP8O43159 456 aaKnown RBP12.58□□□□□ -0.4
CTNS-208ENST00000574218 PRB1P04280 392 aa12.58□□□□□ -0.4
CTNS-208ENST00000574218 CYBBP04839 570 aa12.58□□□□□ -0.4
CTNS-208ENST00000574218 P4HA1P13674 534 aa12.58□□□□□ -0.4
CTNS-208ENST00000574218 IL12RB1P42701 662 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms