RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 TKTL1P51854 596 aa18.3■□□□□ 0.52
SMG6-214ENST00000573827 BCAT1P54687 386 aa18.3■□□□□ 0.52
SMG6-214ENST00000573827 RSPO4Q2I0M5 234 aaPredicted RBP18.3■□□□□ 0.52
SMG6-214ENST00000573827 SGO2Q562F6 1265 aa18.3■□□□□ 0.52
SMG6-214ENST00000573827 LCLAT1Q6UWP7 414 aa18.3■□□□□ 0.52
SMG6-214ENST00000573827 MIB1Q86YT6 1006 aa18.3■□□□□ 0.52
SMG6-214ENST00000573827 IRF2BP1Q8IU81 584 aa18.3■□□□□ 0.52
SMG6-214ENST00000573827 CCDC33Q8N5R6 958 aa18.3■□□□□ 0.52
SMG6-214ENST00000573827 NAT16Q8N8M0 369 aa18.3■□□□□ 0.52
SMG6-214ENST00000573827 SECISBP2LQ93073 1101 aaKnown RBP18.3■□□□□ 0.52
SMG6-214ENST00000573827 NT5C1BQ96P26 610 aa18.3■□□□□ 0.52
SMG6-214ENST00000573827 ULBP1Q9BZM6 244 aa18.3■□□□□ 0.52
SMG6-214ENST00000573827 CD248Q9HCU0 757 aa18.3■□□□□ 0.52
SMG6-214ENST00000573827 CHMP5Q9NZZ3 219 aa18.3■□□□□ 0.52
SMG6-214ENST00000573827 FBXO10Q9UK96 956 aa18.3■□□□□ 0.52
SMG6-214ENST00000573827 KIAA1257Q9ULG3 409 aa18.3■□□□□ 0.52
SMG6-214ENST00000573827 CNTN6Q9UQ52 1028 aa18.3■□□□□ 0.52
SMG6-214ENST00000573827 ACACBO00763 2458 aa18.3■□□□□ 0.52
SMG6-214ENST00000573827 DCLK1O15075 740 aa18.29■□□□□ 0.52
SMG6-214ENST00000573827 EPN2O95208 641 aa18.29■□□□□ 0.52
SMG6-214ENST00000573827 ZBED1O96006 694 aa18.29■□□□□ 0.52
SMG6-214ENST00000573827 CALCAP01258 141 aa18.29■□□□□ 0.52
SMG6-214ENST00000573827 CISD3P0C7P0 127 aa18.29■□□□□ 0.52
SMG6-214ENST00000573827 YWHAEP62258 255 aaKnown RBP18.29■□□□□ 0.52
SMG6-214ENST00000573827 GCNT1Q02742 428 aa18.29■□□□□ 0.52
SMG6-214ENST00000573827 LMNB2Q03252 620 aa18.29■□□□□ 0.52
SMG6-214ENST00000573827 BST2Q10589 180 aaKnown RBP18.29■□□□□ 0.52
SMG6-214ENST00000573827 KCNH2Q12809 1159 aa18.29■□□□□ 0.52
SMG6-214ENST00000573827 CSRP2Q16527 193 aa18.29■□□□□ 0.52
SMG6-214ENST00000573827 PLK5Q496M5 336 aa18.29■□□□□ 0.52
SMG6-214ENST00000573827 TMEM270Q6UE05 265 aa18.29■□□□□ 0.52
SMG6-214ENST00000573827 CEP68Q76N32 757 aa18.29■□□□□ 0.52
SMG6-214ENST00000573827 CACNA2D4Q7Z3S7 1137 aa18.29■□□□□ 0.52
SMG6-214ENST00000573827 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.29■□□□□ 0.52
SMG6-214ENST00000573827 TERB1Q8NA31 727 aa18.29■□□□□ 0.52
SMG6-214ENST00000573827 TXNDC5Q8NBS9 432 aaKnown RBP18.29■□□□□ 0.52
SMG6-214ENST00000573827 EHBP1Q8NDI1 1231 aa18.29■□□□□ 0.52
SMG6-214ENST00000573827 MDGA1Q8NFP4 955 aa18.29■□□□□ 0.52
SMG6-214ENST00000573827 OLIG1Q8TAK6 271 aa18.29■□□□□ 0.52
SMG6-214ENST00000573827 UBA3Q8TBC4 463 aa18.29■□□□□ 0.52
SMG6-214ENST00000573827 SLC35F5Q8WV83 523 aa18.29■□□□□ 0.52
SMG6-214ENST00000573827 KCTD13Q8WZ19 329 aa18.29■□□□□ 0.52
SMG6-214ENST00000573827 LOXL4Q96JB6 756 aa18.29■□□□□ 0.52
SMG6-214ENST00000573827 CNOT6LQ96LI5 555 aaKnown RBP18.29■□□□□ 0.52
SMG6-214ENST00000573827 SRRTQ9BXP5 876 aaKnown RBP18.29■□□□□ 0.52
SMG6-214ENST00000573827 DUSP15Q9H1R2 295 aaPredicted RBP18.29■□□□□ 0.52
SMG6-214ENST00000573827 ZDHHC4Q9NPG8 344 aa18.29■□□□□ 0.52
SMG6-214ENST00000573827 SEMA4GQ9NTN9 838 aa18.29■□□□□ 0.52
SMG6-214ENST00000573827 DEC1Q9P2X7 70 aa18.29■□□□□ 0.52
SMG6-214ENST00000573827 STARD13Q9Y3M8 1113 aa18.29■□□□□ 0.52
SMG6-214ENST00000573827 RALGAPA1Q6GYQ0 2036 aa18.28■□□□□ 0.52
SMG6-214ENST00000573827 GFRA2O00451 464 aa18.28■□□□□ 0.52
SMG6-214ENST00000573827 KLF8O95600 359 aaPredicted RBP18.28■□□□□ 0.52
SMG6-214ENST00000573827 GNA14O95837 355 aa18.28■□□□□ 0.52
SMG6-214ENST00000573827 PENKP01210 267 aaPredicted RBP18.28■□□□□ 0.52
SMG6-214ENST00000573827 RALAP11233 206 aa18.28■□□□□ 0.52
SMG6-214ENST00000573827 TYRP14679 529 aa18.28■□□□□ 0.52
SMG6-214ENST00000573827 CD19P15391 556 aa18.28■□□□□ 0.52
SMG6-214ENST00000573827 TIE1P35590 1138 aa18.28■□□□□ 0.52
SMG6-214ENST00000573827 YWHAGP61981 247 aaKnown RBP eCLIP18.28■□□□□ 0.52
SMG6-214ENST00000573827 EFEMP1Q12805 493 aa18.28■□□□□ 0.52
SMG6-214ENST00000573827 PUM1Q14671 1186 aaKnown RBP eCLIP18.28■□□□□ 0.52
SMG6-214ENST00000573827 CAMK4Q16566 473 aa18.28■□□□□ 0.52
SMG6-214ENST00000573827 ANO4Q32M45 955 aa18.28■□□□□ 0.52
SMG6-214ENST00000573827 HSF5Q4G112 596 aaPredicted RBP18.28■□□□□ 0.52
SMG6-214ENST00000573827 PLA2G2CQ5R387 149 aa18.28■□□□□ 0.52
SMG6-214ENST00000573827 RRAGAQ7L523 313 aa18.28■□□□□ 0.52
SMG6-214ENST00000573827 ERMP1Q7Z2K6 904 aa18.28■□□□□ 0.52
SMG6-214ENST00000573827 FAM217AQ8IXS0 508 aa18.28■□□□□ 0.52
SMG6-214ENST00000573827 SCML4Q8N228 414 aa18.28■□□□□ 0.52
SMG6-214ENST00000573827 TSTD1Q8NFU3 115 aa18.28■□□□□ 0.52
SMG6-214ENST00000573827 CDK5RAP1Q96SZ6 601 aaKnown RBP18.28■□□□□ 0.52
SMG6-214ENST00000573827 RWDD2AQ9UIY3 292 aa18.28■□□□□ 0.52
SMG6-214ENST00000573827 USP18Q9UMW8 372 aa18.28■□□□□ 0.52
SMG6-214ENST00000573827 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.28■□□□□ 0.52
SMG6-214ENST00000573827 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.28■□□□□ 0.52
SMG6-214ENST00000573827 YJEFN3A6XGL0 299 aa18.27■□□□□ 0.52
SMG6-214ENST00000573827 PRRT4C9JH25 899 aa18.27■□□□□ 0.52
SMG6-214ENST00000573827 E7ENQ6 273 aa18.27■□□□□ 0.52
SMG6-214ENST00000573827 AFPP02771 609 aaKnown RBP18.27■□□□□ 0.52
SMG6-214ENST00000573827 SETSIPP0DME0 302 aa18.27■□□□□ 0.52
SMG6-214ENST00000573827 DGKEP52429 567 aa18.27■□□□□ 0.52
SMG6-214ENST00000573827 ADIGQ0VDE8 80 aa18.27■□□□□ 0.52
SMG6-214ENST00000573827 CNGA2Q16280 664 aa18.27■□□□□ 0.52
SMG6-214ENST00000573827 FYB2Q5VWT5 728 aa18.27■□□□□ 0.52
SMG6-214ENST00000573827 PMF1Q6P1K2 205 aa18.27■□□□□ 0.52
SMG6-214ENST00000573827 TOGARAM2Q6ZUX3 1019 aa18.27■□□□□ 0.52
SMG6-214ENST00000573827 TADA2BQ86TJ2 420 aa18.27■□□□□ 0.52
SMG6-214ENST00000573827 ARHGAP18Q8N392 663 aa18.27■□□□□ 0.52
SMG6-214ENST00000573827 PPM1KQ8N3J5 372 aa18.27■□□□□ 0.52
SMG6-214ENST00000573827 KCNV2Q8TDN2 545 aa18.27■□□□□ 0.52
SMG6-214ENST00000573827 BBS2Q9BXC9 721 aa18.27■□□□□ 0.52
SMG6-214ENST00000573827 INTS2Q9H0H0 1204 aaKnown RBP18.27■□□□□ 0.52
SMG6-214ENST00000573827 MARCH2Q9P0N8 246 aa18.27■□□□□ 0.52
SMG6-214ENST00000573827 WDR35Q9P2L0 1181 aa18.27■□□□□ 0.52
SMG6-214ENST00000573827 RASAL2Q9UJF2 1139 aa18.27■□□□□ 0.52
SMG6-214ENST00000573827 LSM7Q9UK45 103 aaKnown RBP18.27■□□□□ 0.52
SMG6-214ENST00000573827 AGO1Q9UL18 857 aaKnown RBP18.27■□□□□ 0.52
SMG6-214ENST00000573827 PCDHB4Q9Y5E5 795 aa18.27■□□□□ 0.52
SMG6-214ENST00000573827 TBC1D3BA6NDS4 549 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms