RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 TREML2Q5T2D2 321 aa5.65□□□□□ -1.5
CDC27-215ENST00000573550 PPP4R4Q6NUP7 873 aa5.65□□□□□ -1.5
CDC27-215ENST00000573550 BPIFB1Q8TDL5 484 aa5.65□□□□□ -1.5
CDC27-215ENST00000573550 GLG1Q92896 1179 aa5.65□□□□□ -1.5
CDC27-215ENST00000573550 SPSB4Q96A44 273 aa5.65□□□□□ -1.5
CDC27-215ENST00000573550 ZNF764Q96H86 408 aaPredicted RBP5.65□□□□□ -1.5
CDC27-215ENST00000573550 MSLNLQ96KJ4 702 aa5.65□□□□□ -1.5
CDC27-215ENST00000573550 C8orf48Q96LL4 319 aa5.65□□□□□ -1.5
CDC27-215ENST00000573550 XPNPEP3Q9NQH7 507 aa5.65□□□□□ -1.5
CDC27-215ENST00000573550 ARHGEF3Q9NR81 526 aa5.65□□□□□ -1.5
CDC27-215ENST00000573550 ADAM21Q9UKJ8 722 aa5.65□□□□□ -1.5
CDC27-215ENST00000573550 OGDHLQ9ULD0 1010 aa5.65□□□□□ -1.5
CDC27-215ENST00000573550 SH2B3Q9UQQ2 575 aa5.65□□□□□ -1.5
CDC27-215ENST00000573550 TBC1D30Q9Y2I9 924 aa5.65□□□□□ -1.5
CDC27-215ENST00000573550 PCDHGB6Q9Y5F9 930 aa5.65□□□□□ -1.5
CDC27-215ENST00000573550 TTC21AQ8NDW8 1320 aa5.65□□□□□ -1.51
CDC27-215ENST00000573550 TNRQ92752 1358 aa5.65□□□□□ -1.51
CDC27-215ENST00000573550 MARF1Q9Y4F3 1742 aaKnown RBP5.65□□□□□ -1.51
CDC27-215ENST00000573550 TSPOAP1O95153 1857 aa5.64□□□□□ -1.51
CDC27-215ENST00000573550 MED1Q15648 1581 aaPredicted RBP5.64□□□□□ -1.51
CDC27-215ENST00000573550 PIK3C2AO00443 1686 aa5.64□□□□□ -1.51
CDC27-215ENST00000573550 EPB41L2O43491 1005 aaKnown RBP5.64□□□□□ -1.51
CDC27-215ENST00000573550 FESP07332 822 aa5.64□□□□□ -1.51
CDC27-215ENST00000573550 FBLP22087 321 aaKnown RBP5.64□□□□□ -1.51
CDC27-215ENST00000573550 ADORA2AP29274 412 aa5.64□□□□□ -1.51
CDC27-215ENST00000573550 AKNAD1Q5T1N1 836 aa5.64□□□□□ -1.51
CDC27-215ENST00000573550 DEPDC1Q5TB30 811 aa5.64□□□□□ -1.51
CDC27-215ENST00000573550 RASAL3Q86YV0 1011 aa5.64□□□□□ -1.51
CDC27-215ENST00000573550 RPAP2Q8IXW5 612 aaPredicted RBP5.64□□□□□ -1.51
CDC27-215ENST00000573550 COG3Q96JB2 828 aa5.64□□□□□ -1.51
CDC27-215ENST00000573550 HAPLN3Q96S86 360 aa5.64□□□□□ -1.51
CDC27-215ENST00000573550 ZNF287Q9HBT7 754 aa5.64□□□□□ -1.51
CDC27-215ENST00000573550 GLOD4Q9HC38 313 aa5.64□□□□□ -1.51
CDC27-215ENST00000573550 CPNE5Q9HCH3 593 aa5.64□□□□□ -1.51
CDC27-215ENST00000573550 STK26Q9P289 416 aa5.64□□□□□ -1.51
CDC27-215ENST00000573550 RGS17Q9UGC6 210 aaPredicted RBP5.64□□□□□ -1.51
CDC27-215ENST00000573550 CRYBG1Q9Y4K1 1723 aa5.64□□□□□ -1.51
CDC27-215ENST00000573550 METP08581 1390 aa5.64□□□□□ -1.51
CDC27-215ENST00000573550 ARHGEF17Q96PE2 2063 aaPredicted RBP5.63□□□□□ -1.51
CDC27-215ENST00000573550 A1L4Q6 167 aa5.63□□□□□ -1.51
CDC27-215ENST00000573550 GOLGA6L3A6NEY3 463 aa5.63□□□□□ -1.51
CDC27-215ENST00000573550 H0YIZ8 118 aa5.63□□□□□ -1.51
CDC27-215ENST00000573550 PROP1O75360 226 aa5.63□□□□□ -1.51
CDC27-215ENST00000573550 MAP4K4O95819 1239 aaPredicted RBP5.63□□□□□ -1.51
CDC27-215ENST00000573550 ONECUT2O95948 504 aa5.63□□□□□ -1.51
CDC27-215ENST00000573550 IL1R1P14778 569 aa5.63□□□□□ -1.51
CDC27-215ENST00000573550 GPD1P21695 349 aa5.63□□□□□ -1.51
CDC27-215ENST00000573550 CCT8P50990 548 aa5.63□□□□□ -1.51
CDC27-215ENST00000573550 SOX10P56693 466 aa5.63□□□□□ -1.51
CDC27-215ENST00000573550 PROK1P58294 105 aa5.63□□□□□ -1.51
CDC27-215ENST00000573550 NHLH1Q02575 133 aa5.63□□□□□ -1.51
CDC27-215ENST00000573550 RABEP1Q15276 862 aa5.63□□□□□ -1.51
CDC27-215ENST00000573550 TWISTNBQ3B726 338 aaPredicted RBP5.63□□□□□ -1.51
CDC27-215ENST00000573550 ANKRD16Q6P6B7 361 aa5.63□□□□□ -1.51
CDC27-215ENST00000573550 ZNF575Q86XF7 245 aa5.63□□□□□ -1.51
CDC27-215ENST00000573550 ABRAQ8N0Z2 381 aa5.63□□□□□ -1.51
CDC27-215ENST00000573550 KRT78Q8N1N4 520 aa5.63□□□□□ -1.51
CDC27-215ENST00000573550 SOCS4Q8WXH5 440 aa5.63□□□□□ -1.51
CDC27-215ENST00000573550 TTC17Q96AE7 1141 aa5.63□□□□□ -1.51
CDC27-215ENST00000573550 PPP1R9BQ96SB3 815 aa5.63□□□□□ -1.51
CDC27-215ENST00000573550 BTBD1Q9H0C5 482 aa5.63□□□□□ -1.51
CDC27-215ENST00000573550 DCTPP1Q9H773 170 aa5.63□□□□□ -1.51
CDC27-215ENST00000573550 DLL3Q9NYJ7 618 aa5.63□□□□□ -1.51
CDC27-215ENST00000573550 PTGFRNQ9P2B2 879 aa5.63□□□□□ -1.51
CDC27-215ENST00000573550 DNMT3BQ9UBC3 853 aaKnown RBP5.63□□□□□ -1.51
CDC27-215ENST00000573550 SNX14Q9Y5W7 946 aa5.63□□□□□ -1.51
CDC27-215ENST00000573550 SBNO1A3KN83 1393 aa5.63□□□□□ -1.51
CDC27-215ENST00000573550 CRB1P82279 1406 aa5.63□□□□□ -1.51
CDC27-215ENST00000573550 CHL1O00533 1208 aa5.62□□□□□ -1.51
CDC27-215ENST00000573550 CCP110O43303 1012 aa5.62□□□□□ -1.51
CDC27-215ENST00000573550 HTATSF1O43719 755 aaKnown RBP5.62□□□□□ -1.51
CDC27-215ENST00000573550 ZKSCAN1P17029 563 aaPredicted RBP5.62□□□□□ -1.51
CDC27-215ENST00000573550 ALDH9A1P49189 494 aa5.62□□□□□ -1.51
CDC27-215ENST00000573550 PRKAG1P54619 331 aa5.62□□□□□ -1.51
CDC27-215ENST00000573550 PTCHD3Q3KNS1 767 aa5.62□□□□□ -1.51
CDC27-215ENST00000573550 CASC1Q6TDU7 716 aa5.62□□□□□ -1.51
CDC27-215ENST00000573550 AMIGO2Q86SJ2 522 aa5.62□□□□□ -1.51
CDC27-215ENST00000573550 ANKRD44Q8N8A2 993 aa5.62□□□□□ -1.51
CDC27-215ENST00000573550 TMEM171Q8WVE6 324 aa5.62□□□□□ -1.51
CDC27-215ENST00000573550 OSCP1Q8WVF1 389 aa5.62□□□□□ -1.51
CDC27-215ENST00000573550 NELL1Q92832 810 aa5.62□□□□□ -1.51
CDC27-215ENST00000573550 R3HDM4Q96D70 268 aa5.62□□□□□ -1.51
CDC27-215ENST00000573550 APOL5Q9BWW9 433 aa5.62□□□□□ -1.51
CDC27-215ENST00000573550 BABAM1Q9NWV8 329 aa5.62□□□□□ -1.51
CDC27-215ENST00000573550 ZSCAN32Q9NX65 697 aa5.62□□□□□ -1.51
CDC27-215ENST00000573550 GABRQQ9UN88 632 aa5.62□□□□□ -1.51
CDC27-215ENST00000573550 CDY1Q9Y6F8 540 aa5.62□□□□□ -1.51
CDC27-215ENST00000573550 FLT4P35916 1363 aa5.62□□□□□ -1.51
CDC27-215ENST00000573550 ZNF142P52746 1687 aaPredicted RBP5.62□□□□□ -1.51
CDC27-215ENST00000573550 OVOS2A0A0G2JMS6 1433 aa5.61□□□□□ -1.51
CDC27-215ENST00000573550 LOC102723971A0A1B0GUV8 181 aa5.61□□□□□ -1.51
CDC27-215ENST00000573550 H7C4K7 107 aa5.61□□□□□ -1.51
CDC27-215ENST00000573550 ZNF213O14771 459 aa5.61□□□□□ -1.51
CDC27-215ENST00000573550 HMMRO75330 724 aa5.61□□□□□ -1.51
CDC27-215ENST00000573550 REC8O95072 547 aa5.61□□□□□ -1.51
CDC27-215ENST00000573550 HSP90AB1P08238 724 aaKnown RBP5.61□□□□□ -1.51
CDC27-215ENST00000573550 NDUFB7P17568 137 aa5.61□□□□□ -1.51
CDC27-215ENST00000573550 RPL17P18621 184 aaKnown RBP5.61□□□□□ -1.51
CDC27-215ENST00000573550 MSH6P52701 1360 aa5.61□□□□□ -1.51
CDC27-215ENST00000573550 NUCB2P80303 420 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms