RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 CACNG3O60359 315 aa19.05■□□□□ 0.64
CHD3-214ENST00000572579 RHOBTB1O94844 696 aa19.05■□□□□ 0.64
CHD3-214ENST00000572579 CAVIN2O95810 425 aa19.05■□□□□ 0.64
CHD3-214ENST00000572579 TYRP14679 529 aa19.05■□□□□ 0.64
CHD3-214ENST00000572579 GBP1P32455 592 aa19.05■□□□□ 0.64
CHD3-214ENST00000572579 P2RY2P41231 377 aa19.05■□□□□ 0.64
CHD3-214ENST00000572579 WASP42768 502 aa19.05■□□□□ 0.64
CHD3-214ENST00000572579 PLA2G4AP47712 749 aa19.05■□□□□ 0.64
CHD3-214ENST00000572579 FKBP3Q00688 224 aaKnown RBP19.05■□□□□ 0.64
CHD3-214ENST00000572579 HSF5Q4G112 596 aaPredicted RBP19.05■□□□□ 0.64
CHD3-214ENST00000572579 C10orf76Q5T2E6 689 aa19.05■□□□□ 0.64
CHD3-214ENST00000572579 EGFLAMQ63HQ2 1017 aa19.05■□□□□ 0.64
CHD3-214ENST00000572579 ANKRD52Q8NB46 1076 aa19.05■□□□□ 0.64
CHD3-214ENST00000572579 ZSWIM1Q9BR11 485 aa19.05■□□□□ 0.64
CHD3-214ENST00000572579 UBXN6Q9BZV1 441 aa19.05■□□□□ 0.64
CHD3-214ENST00000572579 VPS45Q9NRW7 570 aa19.05■□□□□ 0.64
CHD3-214ENST00000572579 DNAJC17Q9NVM6 304 aaKnown RBP19.05■□□□□ 0.64
CHD3-214ENST00000572579 CLIC5Q9NZA1 410 aa19.05■□□□□ 0.64
CHD3-214ENST00000572579 FBXO10Q9UK96 956 aa19.05■□□□□ 0.64
CHD3-214ENST00000572579 MAN1B1Q9UKM7 699 aa19.05■□□□□ 0.64
CHD3-214ENST00000572579 STARD13Q9Y3M8 1113 aa19.05■□□□□ 0.64
CHD3-214ENST00000572579 SLC16A3O15427 465 aaKnown RBP19.04■□□□□ 0.64
CHD3-214ENST00000572579 ADRB1P08588 477 aa19.04■□□□□ 0.64
CHD3-214ENST00000572579 ELF2Q15723 593 aa19.04■□□□□ 0.64
CHD3-214ENST00000572579 DCAF17Q5H9S7 520 aaPredicted RBP19.04■□□□□ 0.64
CHD3-214ENST00000572579 EOGTQ5NDL2 527 aa19.04■□□□□ 0.64
CHD3-214ENST00000572579 BTBD8Q5XKL5 378 aa19.04■□□□□ 0.64
CHD3-214ENST00000572579 ZNF513Q8N8E2 541 aaPredicted RBP19.04■□□□□ 0.64
CHD3-214ENST00000572579 C12orf50Q8NA57 414 aaPredicted RBP19.04■□□□□ 0.64
CHD3-214ENST00000572579 CCDC150Q8NCX0 1101 aa19.04■□□□□ 0.64
CHD3-214ENST00000572579 HMGB4Q8WW32 186 aa19.04■□□□□ 0.64
CHD3-214ENST00000572579 BHMTQ93088 406 aa19.04■□□□□ 0.64
CHD3-214ENST00000572579 ERLEC1Q96DZ1 483 aa19.04■□□□□ 0.64
CHD3-214ENST00000572579 TIGD1Q96MW7 591 aa19.04■□□□□ 0.64
CHD3-214ENST00000572579 BBS2Q9BXC9 721 aa19.04■□□□□ 0.64
CHD3-214ENST00000572579 RMND1Q9NWS8 449 aa19.04■□□□□ 0.64
CHD3-214ENST00000572579 PLK2Q9NYY3 685 aa19.04■□□□□ 0.64
CHD3-214ENST00000572579 CLEC4EQ9ULY5 219 aa19.04■□□□□ 0.64
CHD3-214ENST00000572579 TCRBV21S2A2A0A5A6 115 aa19.03■□□□□ 0.64
CHD3-214ENST00000572579 FOXD2O60548 495 aaPredicted RBP19.03■□□□□ 0.64
CHD3-214ENST00000572579 CALCAP01258 141 aa19.03■□□□□ 0.64
CHD3-214ENST00000572579 GABRG2P18507 467 aa19.03■□□□□ 0.64
CHD3-214ENST00000572579 PTGER3P43115 390 aa19.03■□□□□ 0.64
CHD3-214ENST00000572579 LRMPQ12912 555 aa19.03■□□□□ 0.64
CHD3-214ENST00000572579 CUL2Q13617 745 aa19.03■□□□□ 0.64
CHD3-214ENST00000572579 TCERG1LQ5VWI1 586 aa19.03■□□□□ 0.64
CHD3-214ENST00000572579 PM20D1Q6GTS8 502 aa19.03■□□□□ 0.64
CHD3-214ENST00000572579 KIAA1211LQ6NV74 962 aa19.03■□□□□ 0.64
CHD3-214ENST00000572579 LMO3Q8TAP4 145 aa19.03■□□□□ 0.64
CHD3-214ENST00000572579 KCNV2Q8TDN2 545 aa19.03■□□□□ 0.64
CHD3-214ENST00000572579 TFAP2BQ92481 460 aa19.03■□□□□ 0.64
CHD3-214ENST00000572579 SMARCE1Q969G3 411 aa19.03■□□□□ 0.64
CHD3-214ENST00000572579 CNTNAP3BQ96NU0 1288 aa19.03■□□□□ 0.64
CHD3-214ENST00000572579 CNTNAP3Q9BZ76 1288 aa19.03■□□□□ 0.64
CHD3-214ENST00000572579 TMEM74BQ9NUR3 256 aa19.03■□□□□ 0.64
CHD3-214ENST00000572579 MYO18AQ92614 2054 aaKnown RBP19.02■□□□□ 0.64
CHD3-214ENST00000572579 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.02■□□□□ 0.64
CHD3-214ENST00000572579 PPP1R3GB7ZBB8 358 aa19.02■□□□□ 0.64
CHD3-214ENST00000572579 WASH3PC4AMC7 463 aa19.02■□□□□ 0.64
CHD3-214ENST00000572579 RNF225M0QZC1 329 aaPredicted RBP19.02■□□□□ 0.64
CHD3-214ENST00000572579 STX10O60499 249 aa19.02■□□□□ 0.64
CHD3-214ENST00000572579 HMBSP08397 361 aa19.02■□□□□ 0.64
CHD3-214ENST00000572579 TKTL1P51854 596 aa19.02■□□□□ 0.64
CHD3-214ENST00000572579 PDE4CQ08493 712 aa19.02■□□□□ 0.64
CHD3-214ENST00000572579 EFEMP1Q12805 493 aa19.02■□□□□ 0.64
CHD3-214ENST00000572579 GOLGA7BQ2TAP0 167 aa19.02■□□□□ 0.64
CHD3-214ENST00000572579 PKDCCQ504Y2 493 aa19.02■□□□□ 0.64
CHD3-214ENST00000572579 FYB2Q5VWT5 728 aa19.02■□□□□ 0.64
CHD3-214ENST00000572579 GRAMD4Q6IC98 578 aa19.02■□□□□ 0.64
CHD3-214ENST00000572579 TMEFF1Q8IYR6 380 aa19.02■□□□□ 0.64
CHD3-214ENST00000572579 KAT5Q92993 513 aa19.02■□□□□ 0.64
CHD3-214ENST00000572579 WDR35Q9P2L0 1181 aa19.02■□□□□ 0.64
CHD3-214ENST00000572579 AGO1Q9UL18 857 aaKnown RBP19.02■□□□□ 0.64
CHD3-214ENST00000572579 ACACBO00763 2458 aa19.02■□□□□ 0.64
CHD3-214ENST00000572579 GON4LQ3T8J9 2241 aa19.02■□□□□ 0.64
CHD3-214ENST00000572579 LNP1A1A4G5 178 aa19.01■□□□□ 0.63
CHD3-214ENST00000572579 CDX4O14627 284 aaPredicted RBP19.01■□□□□ 0.63
CHD3-214ENST00000572579 GADD45BO75293 160 aaPredicted RBP19.01■□□□□ 0.63
CHD3-214ENST00000572579 SMC2O95347 1197 aa19.01■□□□□ 0.63
CHD3-214ENST00000572579 PENKP01210 267 aaPredicted RBP19.01■□□□□ 0.63
CHD3-214ENST00000572579 PSEN1P49768 467 aa19.01■□□□□ 0.63
CHD3-214ENST00000572579 IRX4P78413 519 aa19.01■□□□□ 0.63
CHD3-214ENST00000572579 NUCB2P80303 420 aa19.01■□□□□ 0.63
CHD3-214ENST00000572579 LRRC63Q05C16 580 aa19.01■□□□□ 0.63
CHD3-214ENST00000572579 TTI2Q6NXR4 508 aa19.01■□□□□ 0.63
CHD3-214ENST00000572579 ELOA2Q8IYF1 753 aaPredicted RBP19.01■□□□□ 0.63
CHD3-214ENST00000572579 UBA3Q8TBC4 463 aa19.01■□□□□ 0.63
CHD3-214ENST00000572579 TSG101Q99816 390 aa19.01■□□□□ 0.63
CHD3-214ENST00000572579 LSM14BQ9BX40 385 aaKnown RBP19.01■□□□□ 0.63
CHD3-214ENST00000572579 ULBP1Q9BZM6 244 aa19.01■□□□□ 0.63
CHD3-214ENST00000572579 POLMQ9NP87 494 aaPredicted RBP19.01■□□□□ 0.63
CHD3-214ENST00000572579 CD93Q9NPY3 652 aa19.01■□□□□ 0.63
CHD3-214ENST00000572579 ARMCX3Q9UH62 379 aaPredicted RBP19.01■□□□□ 0.63
CHD3-214ENST00000572579 RASAL2Q9UJF2 1139 aa19.01■□□□□ 0.63
CHD3-214ENST00000572579 TSPAN16Q9UKR8 245 aa19.01■□□□□ 0.63
CHD3-214ENST00000572579 EPG5Q9HCE0 2579 aa19.01■□□□□ 0.63
CHD3-214ENST00000572579 RALGAPA1Q6GYQ0 2036 aa19.01■□□□□ 0.63
CHD3-214ENST00000572579 GOLGA6L4A6NEF3 574 aa19■□□□□ 0.63
CHD3-214ENST00000572579 O00370 1275 aa19■□□□□ 0.63
CHD3-214ENST00000572579 ALDH1A2O94788 518 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms