RNA–Protein interactions for RNA: ENST00000571456.1

VPS53-210, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-210ENST00000571456 ASB16Q96NS5 453 aa21.59■■□□□ 1.05
VPS53-210ENST00000571456 DNAJC7Q99615 494 aa21.59■■□□□ 1.05
VPS53-210ENST00000571456 SYNCQ9H7C4 482 aa21.59■■□□□ 1.05
VPS53-210ENST00000571456 SMG5Q9UPR3 1016 aaKnown RBP21.59■■□□□ 1.05
VPS53-210ENST00000571456 ZFYVE26Q68DK2 2539 aa21.58■■□□□ 1.05
VPS53-210ENST00000571456 AP5Z1O43299 807 aa21.58■■□□□ 1.05
VPS53-210ENST00000571456 LAMTOR5O43504 91 aa21.58■■□□□ 1.05
VPS53-210ENST00000571456 OLFM2O95897 454 aa21.58■■□□□ 1.05
VPS53-210ENST00000571456 SCNN1AP37088 669 aa21.58■■□□□ 1.05
VPS53-210ENST00000571456 DAOAP59103 153 aa21.58■■□□□ 1.05
VPS53-210ENST00000571456 NOMO3P69849 1222 aa21.58■■□□□ 1.05
VPS53-210ENST00000571456 TBX2Q13207 712 aaPredicted RBP21.58■■□□□ 1.05
VPS53-210ENST00000571456 TMC6Q7Z403 805 aa21.58■■□□□ 1.05
VPS53-210ENST00000571456 ERICH1Q86X53 443 aa21.58■■□□□ 1.05
VPS53-210ENST00000571456 WDTC1Q8N5D0 677 aa21.58■■□□□ 1.05
VPS53-210ENST00000571456 ING5Q8WYH8 240 aa21.58■■□□□ 1.05
VPS53-210ENST00000571456 MCRS1Q96EZ8 462 aa21.58■■□□□ 1.05
VPS53-210ENST00000571456 ULBP1Q9BZM6 244 aa21.58■■□□□ 1.05
VPS53-210ENST00000571456 SLC2A4RGQ9NR83 387 aa21.58■■□□□ 1.05
VPS53-210ENST00000571456 ABCC13Q9NSE7 274 aa21.58■■□□□ 1.05
VPS53-210ENST00000571456 OLA1Q9NTK5 396 aaKnown RBP21.58■■□□□ 1.05
VPS53-210ENST00000571456 TMEM51Q9NW97 253 aa21.58■■□□□ 1.05
VPS53-210ENST00000571456 SPATA6Q9NWH7 488 aaPredicted RBP21.58■■□□□ 1.05
VPS53-210ENST00000571456 ASNSD1Q9NWL6 643 aa21.58■■□□□ 1.05
VPS53-210ENST00000571456 GMIPQ9P107 970 aa21.58■■□□□ 1.05
VPS53-210ENST00000571456 STRIP2Q9ULQ0 834 aa21.58■■□□□ 1.05
VPS53-210ENST00000571456 ANHXE9PGG2 379 aa21.57■■□□□ 1.04
VPS53-210ENST00000571456 ECI2O75521 394 aa21.57■■□□□ 1.04
VPS53-210ENST00000571456 OAS1P00973 400 aaKnown RBP21.57■■□□□ 1.04
VPS53-210ENST00000571456 GZMAP12544 262 aa21.57■■□□□ 1.04
VPS53-210ENST00000571456 LCP1P13796 627 aa21.57■■□□□ 1.04
VPS53-210ENST00000571456 TCF3P15923 654 aa21.57■■□□□ 1.04
VPS53-210ENST00000571456 HDCP19113 662 aa21.57■■□□□ 1.04
VPS53-210ENST00000571456 TNFAIP3P21580 790 aa21.57■■□□□ 1.04
VPS53-210ENST00000571456 TGM1P22735 817 aa21.57■■□□□ 1.04
VPS53-210ENST00000571456 GABRB2P47870 512 aa21.57■■□□□ 1.04
VPS53-210ENST00000571456 RGS7P49802 495 aa21.57■■□□□ 1.04
VPS53-210ENST00000571456 STARD6P59095 220 aa21.57■■□□□ 1.04
VPS53-210ENST00000571456 YWHAGP61981 247 aaKnown RBP eCLIP21.57■■□□□ 1.04
VPS53-210ENST00000571456 CYP4F8P98187 520 aa21.57■■□□□ 1.04
VPS53-210ENST00000571456 CENPCQ03188 943 aa21.57■■□□□ 1.04
VPS53-210ENST00000571456 PPM1JQ5JR12 505 aa21.57■■□□□ 1.04
VPS53-210ENST00000571456 TOGARAM2Q6ZUX3 1019 aa21.57■■□□□ 1.04
VPS53-210ENST00000571456 DDX42Q86XP3 938 aaKnown RBP eCLIP21.57■■□□□ 1.04
VPS53-210ENST00000571456 PASD1Q8IV76 773 aa21.57■■□□□ 1.04
VPS53-210ENST00000571456 MAB21L3Q8N8X9 362 aa21.57■■□□□ 1.04
VPS53-210ENST00000571456 ZSCAN18Q8TBC5 510 aaPredicted RBP21.57■■□□□ 1.04
VPS53-210ENST00000571456 SLC20A1Q8WUM9 679 aa21.57■■□□□ 1.04
VPS53-210ENST00000571456 ELSPBP1Q96BH3 223 aa21.57■■□□□ 1.04
VPS53-210ENST00000571456 SHDQ96IW2 340 aa21.57■■□□□ 1.04
VPS53-210ENST00000571456 SYT11Q9BT88 431 aa21.57■■□□□ 1.04
VPS53-210ENST00000571456 SLC46A2Q9BY10 475 aa21.57■■□□□ 1.04
VPS53-210ENST00000571456 EPC1Q9H2F5 836 aa21.57■■□□□ 1.04
VPS53-210ENST00000571456 HAUS4Q9H6D7 363 aa21.57■■□□□ 1.04
VPS53-210ENST00000571456 ZFP14Q9HCL3 533 aa21.57■■□□□ 1.04
VPS53-210ENST00000571456 WDR35Q9P2L0 1181 aa21.57■■□□□ 1.04
VPS53-210ENST00000571456 CHORDC1Q9UHD1 332 aaPredicted RBP21.57■■□□□ 1.04
VPS53-210ENST00000571456 NAGPAQ9UK23 515 aa21.57■■□□□ 1.04
VPS53-210ENST00000571456 HELZP42694 1942 aaKnown RBP21.57■■□□□ 1.04
VPS53-210ENST00000571456 GOLGA6L3A6NEY3 463 aa21.56■■□□□ 1.04
VPS53-210ENST00000571456 GOLGA6L6A8MZA4 724 aa21.56■■□□□ 1.04
VPS53-210ENST00000571456 AKR1B15C9JRZ8 316 aaPredicted RBP21.56■■□□□ 1.04
VPS53-210ENST00000571456 MFAP3LO75121 409 aa21.56■■□□□ 1.04
VPS53-210ENST00000571456 CKMP06732 381 aa21.56■■□□□ 1.04
VPS53-210ENST00000571456 UNGP13051 313 aaPredicted RBP21.56■■□□□ 1.04
VPS53-210ENST00000571456 GJA1P17302 382 aa21.56■■□□□ 1.04
VPS53-210ENST00000571456 CHRNB2P17787 502 aa21.56■■□□□ 1.04
VPS53-210ENST00000571456 NSFP46459 744 aaKnown RBP21.56■■□□□ 1.04
VPS53-210ENST00000571456 SLC7A9P82251 487 aa21.56■■□□□ 1.04
VPS53-210ENST00000571456 CSTF1Q05048 431 aaKnown RBP21.56■■□□□ 1.04
VPS53-210ENST00000571456 TDRD12Q587J7 1177 aaKnown RBP21.56■■□□□ 1.04
VPS53-210ENST00000571456 EFHC1Q5JVL4 640 aa21.56■■□□□ 1.04
VPS53-210ENST00000571456 BTBD8Q5XKL5 378 aa21.56■■□□□ 1.04
VPS53-210ENST00000571456 TXNDC8Q6A555 127 aa21.56■■□□□ 1.04
VPS53-210ENST00000571456 CELF5Q8N6W0 485 aaKnown RBP21.56■■□□□ 1.04
VPS53-210ENST00000571456 DEPDC1BQ8WUY9 529 aa21.56■■□□□ 1.04
VPS53-210ENST00000571456 C18orf8Q96DM3 657 aa21.56■■□□□ 1.04
VPS53-210ENST00000571456 VCPIP1Q96JH7 1222 aa21.56■■□□□ 1.04
VPS53-210ENST00000571456 CPXM1Q96SM3 734 aa21.56■■□□□ 1.04
VPS53-210ENST00000571456 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.56■■□□□ 1.04
VPS53-210ENST00000571456 IMPACTQ9P2X3 320 aa21.56■■□□□ 1.04
VPS53-210ENST00000571456 CYTH4Q9UIA0 394 aa21.56■■□□□ 1.04
VPS53-210ENST00000571456 ARHGAP26Q9UNA1 814 aa21.56■■□□□ 1.04
VPS53-210ENST00000571456 FRYQ5TBA9 3013 aa21.55■■□□□ 1.04
VPS53-210ENST00000571456 E5RJQ4 531 aa21.55■■□□□ 1.04
VPS53-210ENST00000571456 DPYSL4O14531 572 aa21.55■■□□□ 1.04
VPS53-210ENST00000571456 TLR5O60602 858 aa21.55■■□□□ 1.04
VPS53-210ENST00000571456 ABL1P00519 1130 aa21.55■■□□□ 1.04
VPS53-210ENST00000571456 CALB1P05937 261 aa21.55■■□□□ 1.04
VPS53-210ENST00000571456 ATP5C1P36542 298 aaKnown RBP21.55■■□□□ 1.04
VPS53-210ENST00000571456 CDK17Q00537 523 aa21.55■■□□□ 1.04
VPS53-210ENST00000571456 GOLGA8FQ08AF8 430 aa21.55■■□□□ 1.04
VPS53-210ENST00000571456 GOLGA8DPQ0D2H9 430 aa21.55■■□□□ 1.04
VPS53-210ENST00000571456 HTR4Q13639 388 aa21.55■■□□□ 1.04
VPS53-210ENST00000571456 CLEC16AQ2KHT3 1053 aa21.55■■□□□ 1.04
VPS53-210ENST00000571456 FAM78AQ5JUQ0 283 aa21.55■■□□□ 1.04
VPS53-210ENST00000571456 PHF13Q86YI8 300 aaPredicted RBP21.55■■□□□ 1.04
VPS53-210ENST00000571456 ARID3BQ8IVW6 561 aaPredicted RBP21.55■■□□□ 1.04
VPS53-210ENST00000571456 ZBTB44Q8NCP5 570 aa21.55■■□□□ 1.04
VPS53-210ENST00000571456 NACA2Q9H009 215 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms