RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 PMM2O15305 246 aa5.55□□□□□ -1.52
CHD9-220ENST00000569794 TULP3O75386 442 aa5.55□□□□□ -1.52
CHD9-220ENST00000569794 PMPCBO75439 489 aa5.55□□□□□ -1.52
CHD9-220ENST00000569794 RNASEH2AO75792 299 aaKnown RBP5.55□□□□□ -1.52
CHD9-220ENST00000569794 XRCC6P12956 609 aaKnown RBP eCLIP5.55□□□□□ -1.52
CHD9-220ENST00000569794 APEHP13798 732 aaKnown RBP5.55□□□□□ -1.52
CHD9-220ENST00000569794 COPB1P53618 953 aaKnown RBP5.55□□□□□ -1.52
CHD9-220ENST00000569794 SUMO2P61956 95 aaKnown RBP5.55□□□□□ -1.52
CHD9-220ENST00000569794 CCDC157Q569K6 752 aa5.55□□□□□ -1.52
CHD9-220ENST00000569794 TMEM65Q6PI78 240 aa5.55□□□□□ -1.52
CHD9-220ENST00000569794 MMS22LQ6ZRQ5 1243 aa5.55□□□□□ -1.52
CHD9-220ENST00000569794 SKAP1Q86WV1 359 aa5.55□□□□□ -1.52
CHD9-220ENST00000569794 PELI3Q8N2H9 469 aa5.55□□□□□ -1.52
CHD9-220ENST00000569794 LINC01465Q8N7H1 131 aa5.55□□□□□ -1.52
CHD9-220ENST00000569794 PPHLN1Q8NEY8 458 aaKnown RBP5.55□□□□□ -1.52
CHD9-220ENST00000569794 TMEM171Q8WVE6 324 aa5.55□□□□□ -1.52
CHD9-220ENST00000569794 TTC17Q96AE7 1141 aa5.55□□□□□ -1.52
CHD9-220ENST00000569794 ZFYVE19Q96K21 471 aa5.55□□□□□ -1.52
CHD9-220ENST00000569794 TRMOQ9BU70 441 aa5.55□□□□□ -1.52
CHD9-220ENST00000569794 C9orf78Q9NZ63 289 aaPredicted RBP5.55□□□□□ -1.52
CHD9-220ENST00000569794 LPAR3Q9UBY5 353 aa5.55□□□□□ -1.52
CHD9-220ENST00000569794 FBXO2Q9UK22 296 aaPredicted RBP5.55□□□□□ -1.52
CHD9-220ENST00000569794 PHTF1Q9UMS5 762 aa5.55□□□□□ -1.52
CHD9-220ENST00000569794 ANKRD6Q9Y2G4 727 aa5.55□□□□□ -1.52
CHD9-220ENST00000569794 F5H423 210 aaPredicted RBP5.54□□□□□ -1.52
CHD9-220ENST00000569794 PSMD9O00233 223 aa5.54□□□□□ -1.52
CHD9-220ENST00000569794 RECQLP46063 649 aaPredicted RBP5.54□□□□□ -1.52
CHD9-220ENST00000569794 RPS13P62277 151 aaKnown RBP5.54□□□□□ -1.52
CHD9-220ENST00000569794 GBX1Q14549 363 aa5.54□□□□□ -1.52
CHD9-220ENST00000569794 PUM3Q15397 648 aaKnown RBP5.54□□□□□ -1.52
CHD9-220ENST00000569794 TOGARAM2Q6ZUX3 1019 aa5.54□□□□□ -1.52
CHD9-220ENST00000569794 PTCHD4Q6ZW05 846 aa5.54□□□□□ -1.52
CHD9-220ENST00000569794 CATIPQ7Z7H3 387 aa5.54□□□□□ -1.52
CHD9-220ENST00000569794 GAS2L3Q86XJ1 694 aa5.54□□□□□ -1.52
CHD9-220ENST00000569794 IGFBPL1Q8WX77 278 aa5.54□□□□□ -1.52
CHD9-220ENST00000569794 GJA10Q969M2 543 aa5.54□□□□□ -1.52
CHD9-220ENST00000569794 NLRC4Q9NPP4 1024 aa5.54□□□□□ -1.52
CHD9-220ENST00000569794 DDX20Q9UHI6 824 aaKnown RBP5.54□□□□□ -1.52
CHD9-220ENST00000569794 HDAC9Q9UKV0 1011 aa5.54□□□□□ -1.52
CHD9-220ENST00000569794 PNMA8BQ9ULN7 279 aaPredicted RBP5.54□□□□□ -1.52
CHD9-220ENST00000569794 MYO1CO00159 1063 aa5.53□□□□□ -1.52
CHD9-220ENST00000569794 THP07101 528 aa5.53□□□□□ -1.52
CHD9-220ENST00000569794 CDKN2AP42771 156 aaKnown RBP5.53□□□□□ -1.52
CHD9-220ENST00000569794 DIO1P49895 249 aa5.53□□□□□ -1.52
CHD9-220ENST00000569794 PRKAG1P54619 331 aa5.53□□□□□ -1.52
CHD9-220ENST00000569794 HYAL1Q12794 435 aa5.53□□□□□ -1.52
CHD9-220ENST00000569794 DAB2IPQ5VWQ8 1189 aa5.53□□□□□ -1.52
CHD9-220ENST00000569794 ZNF549Q6P9A3 640 aa5.53□□□□□ -1.52
CHD9-220ENST00000569794 RANBP10Q6VN20 620 aa5.53□□□□□ -1.52
CHD9-220ENST00000569794 SRLQ86TD4 932 aa5.53□□□□□ -1.52
CHD9-220ENST00000569794 FAM186BQ8IYM0 893 aa5.53□□□□□ -1.52
CHD9-220ENST00000569794 CLASRPQ8N2M8 674 aaKnown RBP5.53□□□□□ -1.52
CHD9-220ENST00000569794 BPIFB1Q8TDL5 484 aa5.53□□□□□ -1.52
CHD9-220ENST00000569794 SKA1Q96BD8 255 aa5.53□□□□□ -1.52
CHD9-220ENST00000569794 CDK5RAP3Q96JB5 506 aa5.53□□□□□ -1.52
CHD9-220ENST00000569794 MPP4Q96JB8 637 aa5.53□□□□□ -1.52
CHD9-220ENST00000569794 PPP1R10Q96QC0 940 aaKnown RBP5.53□□□□□ -1.52
CHD9-220ENST00000569794 ZBTB40Q9NUA8 1239 aa5.53□□□□□ -1.52
CHD9-220ENST00000569794 RABGAP1Q9Y3P9 1069 aa5.53□□□□□ -1.52
CHD9-220ENST00000569794 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.53□□□□□ -1.52
CHD9-220ENST00000569794 NOTCH4Q99466 2003 aa5.52□□□□□ -1.53
CHD9-220ENST00000569794 M0R3H8 397 aa5.52□□□□□ -1.53
CHD9-220ENST00000569794 T-ENOLP0DO92 83 aa5.52□□□□□ -1.53
CHD9-220ENST00000569794 TMEM63BQ5T3F8 832 aa5.52□□□□□ -1.53
CHD9-220ENST00000569794 XRRA1Q6P2D8 792 aa5.52□□□□□ -1.53
CHD9-220ENST00000569794 DCDC5Q6ZRR9 648 aa5.52□□□□□ -1.53
CHD9-220ENST00000569794 Q6ZTC4 211 aa5.52□□□□□ -1.53
CHD9-220ENST00000569794 C18orf65Q6ZTR6 163 aa5.52□□□□□ -1.53
CHD9-220ENST00000569794 ADHFE1Q8IWW8 467 aa5.52□□□□□ -1.53
CHD9-220ENST00000569794 DNAJC5GQ8N7S2 189 aa5.52□□□□□ -1.53
CHD9-220ENST00000569794 MAFAQ8NHW3 353 aaPredicted RBP5.52□□□□□ -1.53
CHD9-220ENST00000569794 MPLKIPQ8TAP9 179 aa5.52□□□□□ -1.53
CHD9-220ENST00000569794 MTFMTQ96DP5 389 aaKnown RBP5.52□□□□□ -1.53
CHD9-220ENST00000569794 MRGPRX1Q96LB2 322 aa5.52□□□□□ -1.53
CHD9-220ENST00000569794 MYD88Q99836 296 aa5.52□□□□□ -1.53
CHD9-220ENST00000569794 GTPBP4Q9BZE4 634 aaKnown RBP5.52□□□□□ -1.53
CHD9-220ENST00000569794 GBA2Q9HCG7 927 aaPredicted RBP5.52□□□□□ -1.53
CHD9-220ENST00000569794 GAR1Q9NY12 217 aaKnown RBP5.52□□□□□ -1.53
CHD9-220ENST00000569794 A0A087WWL8 130 aa5.51□□□□□ -1.53
CHD9-220ENST00000569794 IL33O95760 270 aa5.51□□□□□ -1.53
CHD9-220ENST00000569794 SETSIPP0DME0 302 aa5.51□□□□□ -1.53
CHD9-220ENST00000569794 MT3P25713 68 aa5.51□□□□□ -1.53
CHD9-220ENST00000569794 RHDQ02161 417 aa5.51□□□□□ -1.53
CHD9-220ENST00000569794 MTX1Q13505 466 aa5.51□□□□□ -1.53
CHD9-220ENST00000569794 TOMM20Q15388 145 aa5.51□□□□□ -1.53
CHD9-220ENST00000569794 LONRF1Q17RB8 773 aa5.51□□□□□ -1.53
CHD9-220ENST00000569794 PLA1AQ53H76 456 aa5.51□□□□□ -1.53
CHD9-220ENST00000569794 CERCAMQ5T4B2 595 aa5.51□□□□□ -1.53
CHD9-220ENST00000569794 JAKMIP3Q5VZ66 844 aa5.51□□□□□ -1.53
CHD9-220ENST00000569794 EPM2AIP1Q7L775 607 aaPredicted RBP5.51□□□□□ -1.53
CHD9-220ENST00000569794 MAATS1Q7Z4T9 603 aa5.51□□□□□ -1.53
CHD9-220ENST00000569794 RAB11FIP4Q86YS3 637 aa5.51□□□□□ -1.53
CHD9-220ENST00000569794 SLC15A4Q8N697 577 aa5.51□□□□□ -1.53
CHD9-220ENST00000569794 POF1BQ8WVV4 589 aa5.51□□□□□ -1.53
CHD9-220ENST00000569794 PPP2R3CQ969Q6 453 aa5.51□□□□□ -1.53
CHD9-220ENST00000569794 CTHRC1Q96CG8 243 aa5.51□□□□□ -1.53
CHD9-220ENST00000569794 MVB12AQ96EY5 273 aa5.51□□□□□ -1.53
CHD9-220ENST00000569794 CPA4Q9UI42 421 aa5.51□□□□□ -1.53
CHD9-220ENST00000569794 DRG1Q9Y295 367 aaKnown RBP5.51□□□□□ -1.53
CHD9-220ENST00000569794 DGKBQ9Y6T7 804 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms