RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 CDY1Q9Y6F8 540 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 MRPL42Q9Y6G3 142 aaKnown RBP7.97□□□□□ -1.13
CDH13-214ENST00000569455 USP3Q9Y6I4 520 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 PLXNA3P51805 1871 aa7.97□□□□□ -1.13
CDH13-214ENST00000569455 ZNF638Q14966 1978 aaKnown RBP7.97□□□□□ -1.13
CDH13-214ENST00000569455 TCF20Q9UGU0 1960 aaKnown RBP7.97□□□□□ -1.13
CDH13-214ENST00000569455 GREB1Q4ZG55 1949 aa7.96□□□□□ -1.13
CDH13-214ENST00000569455 hCG_1818297A0A087WSY0 165 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 MTMR11A4FU01 709 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 CCDC151A5D8V7 595 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 FAM187AA6NFU0 413 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 YJEFN3A6XGL0 299 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 E7ENQ6 273 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 PI4K2BG5E9Z4 385 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 M0QYT0 321 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 MDM4O15151 490 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 HEXIM1O94992 359 aaKnown RBP7.96□□□□□ -1.14
CDH13-214ENST00000569455 HAPLN1P10915 354 aaPredicted RBP7.96□□□□□ -1.14
CDH13-214ENST00000569455 NCAM1P13591 858 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 TCF4P15884 667 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 IL1R2P27930 398 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 GBP1P32455 592 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 RDXP35241 583 aaKnown RBP7.96□□□□□ -1.14
CDH13-214ENST00000569455 BMPR1AP36894 532 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 CDKN2BP42772 138 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 FNTAP49354 379 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 TUFMP49411 452 aaKnown RBP7.96□□□□□ -1.14
CDH13-214ENST00000569455 CDR1P51861 262 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 RABGGTBP53611 331 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 SLC5A3P53794 718 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 AIF1P55008 147 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 CDH6P55285 790 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 HDAC4P56524 1084 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 DR1Q01658 176 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 DSG1Q02413 1049 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 DEUP1Q05D60 604 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 IFRD2Q12894 506 aaPredicted RBP7.96□□□□□ -1.14
CDH13-214ENST00000569455 CYP1B1Q16678 543 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 SMTNL2Q2TAL5 461 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 ARL13BQ3SXY8 428 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 MGAT5BQ3V5L5 792 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 MAP9Q49MG5 647 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 ATP13A4Q4VNC1 1196 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 ERMARDQ5T6L9 678 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 BTBD8Q5XKL5 378 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 SLC8B1Q6J4K2 584 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 PDE12Q6L8Q7 609 aaKnown RBP7.96□□□□□ -1.14
CDH13-214ENST00000569455 CCDC137Q6PK04 289 aaKnown RBP7.96□□□□□ -1.14
CDH13-214ENST00000569455 PRSS55Q6UWB4 352 aaPredicted RBP7.96□□□□□ -1.14
CDH13-214ENST00000569455 MFSD7Q6UXD7 560 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 PSTKQ8IV42 348 aaKnown RBP7.96□□□□□ -1.14
CDH13-214ENST00000569455 GPR65Q8IYL9 337 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 PRELID2Q8N945 189 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 TTC13Q8NBP0 860 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 GRK7Q8WTQ7 553 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 RAPGEF5Q92565 580 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 NDRG1Q92597 394 aaKnown RBP7.96□□□□□ -1.14
CDH13-214ENST00000569455 HSPH1Q92598 858 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 NT5C3BQ969T7 300 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 PGLYRP2Q96PD5 576 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 NPY6RQ99463 290 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 MAK16Q9BXY0 300 aaKnown RBP7.96□□□□□ -1.14
CDH13-214ENST00000569455 FRMD8P1Q9BZ68 369 aaPredicted RBP7.96□□□□□ -1.14
CDH13-214ENST00000569455 RAB17Q9H0T7 212 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 LMAN2LQ9H0V9 348 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 EPC1Q9H2F5 836 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 ZNF576Q9H609 170 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 EPHX3Q9H6B9 360 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 LRRC19Q9H756 370 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.96□□□□□ -1.14
CDH13-214ENST00000569455 CHST7Q9NS84 486 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 ABCC13Q9NSE7 274 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.96□□□□□ -1.14
CDH13-214ENST00000569455 TMEM30AQ9NV96 361 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 KLHL11Q9NVR0 708 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 HSFX1Q9UBD0 423 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 LZTS1Q9Y250 596 aa7.96□□□□□ -1.14
CDH13-214ENST00000569455 YBX2Q9Y2T7 364 aaKnown RBP7.96□□□□□ -1.14
CDH13-214ENST00000569455 ZNF487B1APH4 448 aa7.95□□□□□ -1.14
CDH13-214ENST00000569455 H3BNC9 293 aa7.95□□□□□ -1.14
CDH13-214ENST00000569455 TNFRSF10BO14763 440 aa7.95□□□□□ -1.14
CDH13-214ENST00000569455 RAD51CO43502 376 aa7.95□□□□□ -1.14
CDH13-214ENST00000569455 GPR37L1O60883 481 aa7.95□□□□□ -1.14
CDH13-214ENST00000569455 ENDOD1O94919 500 aa7.95□□□□□ -1.14
CDH13-214ENST00000569455 GAS8O95995 478 aa7.95□□□□□ -1.14
CDH13-214ENST00000569455 LINC00271P0C7V0 271 aa7.95□□□□□ -1.14
CDH13-214ENST00000569455 H2AFXP16104 143 aaPredicted RBP7.95□□□□□ -1.14
CDH13-214ENST00000569455 YWHAQP27348 245 aa7.95□□□□□ -1.14
CDH13-214ENST00000569455 TNFRSF8P28908 595 aa7.95□□□□□ -1.14
CDH13-214ENST00000569455 OR1D2P34982 312 aa7.95□□□□□ -1.14
CDH13-214ENST00000569455 COILP38432 576 aaPredicted RBP7.95□□□□□ -1.14
CDH13-214ENST00000569455 PBX2P40425 430 aa7.95□□□□□ -1.14
CDH13-214ENST00000569455 PSEN1P49768 467 aa7.95□□□□□ -1.14
CDH13-214ENST00000569455 YWHAGP61981 247 aaKnown RBP eCLIP7.95□□□□□ -1.14
CDH13-214ENST00000569455 ROR1Q01973 937 aa7.95□□□□□ -1.14
CDH13-214ENST00000569455 LMNB2Q03252 620 aa7.95□□□□□ -1.14
CDH13-214ENST00000569455 KLF1Q13351 362 aaPredicted RBP7.95□□□□□ -1.14
CDH13-214ENST00000569455 TFDP2Q14188 446 aa7.95□□□□□ -1.14
CDH13-214ENST00000569455 CCNG2Q16589 344 aa7.95□□□□□ -1.14
CDH13-214ENST00000569455 TAZQ16635 292 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms