RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 IL17AQ16552 155 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 DUOXA2Q1HG44 320 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 TBC1D25Q3MII6 688 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 TMEM119Q4V9L6 283 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 RILPL1Q5EBL4 403 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 MDH1BQ5I0G3 518 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 TPGS1Q6ZTW0 290 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 ZNF720Q7Z2F6 126 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 SPACA3Q8IXA5 215 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 LSMEM2Q8N112 164 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 CNDP2Q96KP4 475 aaKnown RBP9.18□□□□□ -0.94
SMG1-216ENST00000569122 ZFRQ96KR1 1074 aaKnown RBP9.18□□□□□ -0.94
SMG1-216ENST00000569122 PLIN2Q99541 437 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 ACE2Q9BYF1 805 aaPredicted RBP9.18□□□□□ -0.94
SMG1-216ENST00000569122 MKRN2Q9H000 416 aaKnown RBP9.18□□□□□ -0.94
SMG1-216ENST00000569122 SLC6A17Q9H1V8 727 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 FBXO44Q9H4M3 255 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 FBRSQ9HAH7 460 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 TM9SF3Q9HD45 589 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 CRTAC1Q9NQ79 661 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 THAP10Q9P2Z0 257 aaPredicted RBP9.18□□□□□ -0.94
SMG1-216ENST00000569122 CHORDC1Q9UHD1 332 aaPredicted RBP9.18□□□□□ -0.94
SMG1-216ENST00000569122 ZNF510Q9Y2H8 683 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 SLC27A6Q9Y2P4 619 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 CFAP46Q8IYW2 2715 aa9.18□□□□□ -0.94
SMG1-216ENST00000569122 PLXNB3Q9ULL4 1909 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 PLXND1Q9Y4D7 1925 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 TENM4Q6N022 2769 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 A0A1B0GTQ1 180 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 KCNJ18B7U540 433 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 WASH3PC4AMC7 463 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 TRIM24O15164 1050 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 EIF5BO60841 1220 aaKnown RBP9.17□□□□□ -0.94
SMG1-216ENST00000569122 TACC1O75410 805 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 PRPF6O94906 941 aaKnown RBP9.17□□□□□ -0.94
SMG1-216ENST00000569122 ITGAVP06756 1048 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 CISD3P0C7P0 127 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 PTPN1P18031 435 aaKnown RBP9.17□□□□□ -0.94
SMG1-216ENST00000569122 ABCB4P21439 1286 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 ADSSP30520 456 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 CHKAP35790 457 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 ATP5C1P36542 298 aaKnown RBP9.17□□□□□ -0.94
SMG1-216ENST00000569122 CTSKP43235 329 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 ARID5AQ03989 594 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 CCDC173Q0VFZ6 552 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 ENPP2Q13822 863 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 EIF4HQ15056 248 aaKnown RBP9.17□□□□□ -0.94
SMG1-216ENST00000569122 HES3Q5TGS1 186 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 TADA2BQ86TJ2 420 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 SKAP1Q86WV1 359 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 OR6B3Q8NGW1 331 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 RASSF8Q8NHQ8 419 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 CXorf38Q8TB03 319 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 KBTBD7Q8WVZ9 684 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 ZNF578Q96N58 590 aaPredicted RBP9.17□□□□□ -0.94
SMG1-216ENST00000569122 ACCSQ96QU6 501 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 FIZ1Q96SL8 496 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 BTBD1Q9H0C5 482 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 SGK2Q9HBY8 427 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 CD93Q9NPY3 652 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 TLR8Q9NR97 1041 aaKnown RBP9.17□□□□□ -0.94
SMG1-216ENST00000569122 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.17□□□□□ -0.94
SMG1-216ENST00000569122 SEL1LQ9UBV2 794 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 DNMT3LQ9UJW3 386 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 FBXO10Q9UK96 956 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.17□□□□□ -0.94
SMG1-216ENST00000569122 PCDHB13Q9Y5F0 798 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 KNTC1P50748 2209 aa9.17□□□□□ -0.94
SMG1-216ENST00000569122 TNRC6BQ9UPQ9 1833 aaKnown RBP9.17□□□□□ -0.94
SMG1-216ENST00000569122 GOLGA4Q13439 2230 aaKnown RBP9.16□□□□□ -0.94
SMG1-216ENST00000569122 PTPRJQ12913 1337 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 MYO18BQ8IUG5 2567 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.16□□□□□ -0.94
SMG1-216ENST00000569122 VWA3AA6NCI4 1184 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 H0Y8X5 98 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 VILLO15195 856 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 SLC28A2O43868 658 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 BRINP1O60477 761 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 TLR5O60602 858 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 CYBBP04839 570 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 ZDHHC11BP0C7U3 371 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 IRF1P10914 325 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 ACO1P21399 889 aaKnown RBP9.16□□□□□ -0.94
SMG1-216ENST00000569122 PLA2G4AP47712 749 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 ARRB1P49407 418 aaPredicted RBP9.16□□□□□ -0.94
SMG1-216ENST00000569122 TOB1P50616 345 aaPredicted RBP9.16□□□□□ -0.94
SMG1-216ENST00000569122 PCBP4P57723 403 aaKnown RBP9.16□□□□□ -0.94
SMG1-216ENST00000569122 RACK1P63244 317 aaKnown RBP9.16□□□□□ -0.94
SMG1-216ENST00000569122 E2F1Q01094 437 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 ALCAMQ13740 583 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 DHX8Q14562 1220 aaKnown RBP9.16□□□□□ -0.94
SMG1-216ENST00000569122 CCDC142Q17RM4 750 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 FBXL19Q6PCT2 694 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 PCSK4Q6UW60 755 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 SYCP3Q8IZU3 236 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 OR2T3Q8NH03 318 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 ERLEC1Q96DZ1 483 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 MED8Q96G25 268 aa9.16□□□□□ -0.94
SMG1-216ENST00000569122 ELF4Q99607 663 aaPredicted RBP9.16□□□□□ -0.94
SMG1-216ENST00000569122 HNRNPABQ99729 332 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms