RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-215	ENST00000569001	PAXBP1	Q9Y5B6	917 aa		3.6	□□□□□ -1.83
BBS4-215	ENST00000569001	SIRT4	Q9Y6E7	314 aa	Predicted RBP	3.6	□□□□□ -1.83
BBS4-215	ENST00000569001	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	3.59	□□□□□ -1.83
BBS4-215	ENST00000569001		A8MVJ9	347 aa		3.59	□□□□□ -1.83
BBS4-215	ENST00000569001	PQBP1	O60828	265 aa	Known RBP	3.59	□□□□□ -1.83
BBS4-215	ENST00000569001	FGB	P02675	491 aa		3.59	□□□□□ -1.83
BBS4-215	ENST00000569001	TMEM225B	P0DP42	221 aa		3.59	□□□□□ -1.83
BBS4-215	ENST00000569001	THBS4	P35443	961 aa		3.59	□□□□□ -1.83
BBS4-215	ENST00000569001	PLCD1	P51178	756 aa		3.59	□□□□□ -1.83
BBS4-215	ENST00000569001	KRTAP10-9	P60411	292 aa		3.59	□□□□□ -1.83
BBS4-215	ENST00000569001	MTAP	Q13126	283 aa		3.59	□□□□□ -1.83
BBS4-215	ENST00000569001	C10orf25	Q5T742	122 aa		3.59	□□□□□ -1.83
BBS4-215	ENST00000569001	DENND2C	Q68D51	928 aa		3.59	□□□□□ -1.83
BBS4-215	ENST00000569001	CRTC1	Q6UUV9	634 aa		3.59	□□□□□ -1.83
BBS4-215	ENST00000569001	VSTM1	Q6UX27	236 aa		3.59	□□□□□ -1.83
BBS4-215	ENST00000569001	TFAP2D	Q7Z6R9	452 aa		3.59	□□□□□ -1.83
BBS4-215	ENST00000569001	PIP4P1	Q86T03	277 aa		3.59	□□□□□ -1.83
BBS4-215	ENST00000569001	FMNL3	Q8IVF7	1028 aa		3.59	□□□□□ -1.83
BBS4-215	ENST00000569001	C16orf71	Q8IYS4	520 aa	Predicted RBP	3.59	□□□□□ -1.83
BBS4-215	ENST00000569001	PNPLA1	Q8N8W4	532 aa		3.59	□□□□□ -1.83
BBS4-215	ENST00000569001	SMCR8	Q8TEV9	937 aa	Predicted RBP	3.59	□□□□□ -1.83
BBS4-215	ENST00000569001	MSLNL	Q96KJ4	702 aa		3.59	□□□□□ -1.83
BBS4-215	ENST00000569001	FZD4	Q9ULV1	537 aa		3.59	□□□□□ -1.83
BBS4-215	ENST00000569001	FAM50B	Q9Y247	325 aa		3.59	□□□□□ -1.83
BBS4-215	ENST00000569001	LY6G6E	A0A0G2JKS1	128 aa		3.58	□□□□□ -1.84
BBS4-215	ENST00000569001	GOLGA6C	A6NDK9	693 aa		3.58	□□□□□ -1.84
BBS4-215	ENST00000569001	GOLGA6B	A6NDN3	693 aa		3.58	□□□□□ -1.84
BBS4-215	ENST00000569001	TRIM38	O00635	465 aa		3.58	□□□□□ -1.84
BBS4-215	ENST00000569001	WDR47	O94967	919 aa		3.58	□□□□□ -1.84
BBS4-215	ENST00000569001	GOLGA6D	P0CG33	693 aa		3.58	□□□□□ -1.84
BBS4-215	ENST00000569001	TMIGD3	P0DMS9	266 aa	Predicted RBP	3.58	□□□□□ -1.84
BBS4-215	ENST00000569001	AR	P10275	920 aa		3.58	□□□□□ -1.84
BBS4-215	ENST00000569001	CD19	P15391	556 aa		3.58	□□□□□ -1.84
BBS4-215	ENST00000569001	DRD1	P21728	446 aa		3.58	□□□□□ -1.84
BBS4-215	ENST00000569001	TXNL4A	P83876	142 aa	Known RBP	3.58	□□□□□ -1.84
BBS4-215	ENST00000569001	GAB1	Q13480	694 aa		3.58	□□□□□ -1.84
BBS4-215	ENST00000569001	ST3GAL2	Q16842	350 aa		3.58	□□□□□ -1.84
BBS4-215	ENST00000569001	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	3.58	□□□□□ -1.84
BBS4-215	ENST00000569001	CCDC33	Q8N5R6	958 aa		3.58	□□□□□ -1.84
BBS4-215	ENST00000569001	FAM71D	Q8N9W8	422 aa		3.58	□□□□□ -1.84
BBS4-215	ENST00000569001	VPS50	Q96JG6	964 aa		3.58	□□□□□ -1.84
BBS4-215	ENST00000569001	BRIP1	Q9BX63	1249 aa		3.58	□□□□□ -1.84
BBS4-215	ENST00000569001	ADGRE3	Q9BY15	652 aa		3.58	□□□□□ -1.84
BBS4-215	ENST00000569001	FAM83D	Q9H4H8	585 aa		3.58	□□□□□ -1.84
BBS4-215	ENST00000569001	WDR26	Q9H7D7	661 aa		3.58	□□□□□ -1.84
BBS4-215	ENST00000569001	TRIM36	Q9NQ86	728 aa		3.58	□□□□□ -1.84
BBS4-215	ENST00000569001	HEYL	Q9NQ87	328 aa	Predicted RBP	3.58	□□□□□ -1.84
BBS4-215	ENST00000569001	GOLGA6A	Q9NYA3	693 aa		3.58	□□□□□ -1.84
BBS4-215	ENST00000569001	SLC22A23	A1A5C7	686 aa		3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	POM121B	A6NF01	834 aa		3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	RHPN2P1	A8MT19	583 aa		3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	ANXA2	P07355	339 aa	Known RBP	3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	CTSA	P10619	480 aa		3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	CPA2	P48052	419 aa		3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	JAK3	P52333	1124 aa		3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	POLG	P54098	1239 aa	Predicted RBP	3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	WDR5	P61964	334 aa	Known RBP	3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	ID2	Q02363	134 aa		3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	ZNF543	Q08ER8	600 aa		3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	CCDC15	Q0P6D6	951 aa		3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	BFSP2	Q13515	415 aa		3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	PFKFB3	Q16875	520 aa	Predicted RBP	3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	AASDH	Q4L235	1098 aa	Predicted RBP	3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	KRT73	Q86Y46	540 aa		3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	WIPF2	Q8TF74	440 aa	Predicted RBP	3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	PHKB	Q93100	1093 aa		3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	IQCD	Q96DY2	449 aa		3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	TRMT61A	Q96FX7	289 aa	Known RBP	3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	ZNF668	Q96K58	619 aa	Predicted RBP	3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	FAM227B	Q96M60	508 aa		3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	STRBP	Q96SI9	672 aa	Known RBP	3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	NUAK2	Q9H093	628 aa		3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	AGO4	Q9HCK5	861 aa	Known RBP	3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	ARL8B	Q9NVJ2	186 aa		3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	PI4KB	Q9UBF8	816 aa		3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	CAPN11	Q9UMQ6	739 aa		3.57	□□□□□ -1.84
BBS4-215	ENST00000569001	SHROOM4	Q9ULL8	1493 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	COL15A1	P39059	1388 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001		A0A1W2PPC1	479 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	C2CD4B	A6NLJ0	364 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	PROB1	E7EW31	1015 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	FOXN3	O00409	490 aa	Predicted RBP	3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	INPPL1	O15357	1258 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	TLR2	O60603	784 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	INMT	O95050	263 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	IL18RAP	O95256	599 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	PSG1	P11464	419 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	ST6GAL1	P15907	406 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	TACR3	P29371	465 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	IDUA	P35475	653 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	VPS41	P49754	854 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	GPS1	Q13098	491 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	MAPK7	Q13164	816 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	STIM1	Q13586	685 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	DAG1	Q14118	895 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	SLC9C1	Q4G0N8	1177 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	RAP1GAP2	Q684P5	730 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	ABLIM2	Q6H8Q1	611 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	ZNF793	Q6ZN11	406 aa		3.56	□□□□□ -1.84
BBS4-215	ENST00000569001	KRT28	Q7Z3Y7	464 aa		3.56	□□□□□ -1.84

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