RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 GALNT15Q8N3T1 639 aa12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 RDH13Q8NBN7 331 aa12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 GLIS3Q8NEA6 775 aa12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 BAHD1Q8TBE0 780 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 CCDC127Q96BQ5 260 aa12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 CLIC6Q96NY7 704 aa12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 GPR174Q9BXC1 333 aa12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 KLF16Q9BXK1 252 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 TRIM9Q9C026 710 aa12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 MKRN2Q9H000 416 aaKnown RBP12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 XYLT2Q9H1B5 865 aa12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 SMYD3Q9H7B4 428 aa12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 PRDM16Q9HAZ2 1276 aa12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 IL21RQ9HBE5 538 aa12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 CYLDQ9NQC7 956 aa12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 TLR8Q9NR97 1041 aaKnown RBP12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 TOR4AQ9NXH8 423 aa12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 FNDC3AQ9Y2H6 1198 aaKnown RBP12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 PCDHGB2Q9Y5G2 931 aa12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 STON1Q9Y6Q2 735 aa12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 ASH1LQ9NR48 2969 aaKnown RBP12.47□□□□□ -0.41
GTF3C1-209ENST00000568569 WASH3PC4AMC7 463 aa12.46□□□□□ -0.41
GTF3C1-209ENST00000568569 NPC1O15118 1278 aa12.46□□□□□ -0.41
GTF3C1-209ENST00000568569 EIF3DO15371 548 aaKnown RBP eCLIP12.46□□□□□ -0.41
GTF3C1-209ENST00000568569 CISD3P0C7P0 127 aa12.46□□□□□ -0.41
GTF3C1-209ENST00000568569 OXTRP30559 389 aa12.46□□□□□ -0.41
GTF3C1-209ENST00000568569 ATP5C1P36542 298 aaKnown RBP12.46□□□□□ -0.41
GTF3C1-209ENST00000568569 MYL6P60660 151 aa12.46□□□□□ -0.41
GTF3C1-209ENST00000568569 CYP24A1Q07973 514 aa12.46□□□□□ -0.41
GTF3C1-209ENST00000568569 DCAF12L1Q5VU92 463 aa12.46□□□□□ -0.41
GTF3C1-209ENST00000568569 DBX2Q6ZNG2 339 aa12.46□□□□□ -0.41
GTF3C1-209ENST00000568569 PAQR9Q6ZVX9 377 aa12.46□□□□□ -0.41
GTF3C1-209ENST00000568569 FUKQ8N0W3 1084 aa12.46□□□□□ -0.41
GTF3C1-209ENST00000568569 BHMTQ93088 406 aa12.46□□□□□ -0.41
GTF3C1-209ENST00000568569 COL26A1Q96A83 441 aa12.46□□□□□ -0.41
GTF3C1-209ENST00000568569 VRTNQ9H8Y1 702 aa12.46□□□□□ -0.41
GTF3C1-209ENST00000568569 ITM2CQ9NQX7 267 aa12.46□□□□□ -0.41
GTF3C1-209ENST00000568569 AGPAT3Q9NRZ7 376 aa12.46□□□□□ -0.41
GTF3C1-209ENST00000568569 PPP4R2Q9NY27 417 aa12.46□□□□□ -0.41
GTF3C1-209ENST00000568569 A0A087WV48 116 aa12.45□□□□□ -0.42
GTF3C1-209ENST00000568569 METTL12A8MUP2 240 aa12.45□□□□□ -0.42
GTF3C1-209ENST00000568569 KALRNO60229 2985 aa12.45□□□□□ -0.42
GTF3C1-209ENST00000568569 SYNCRIPO60506 623 aaKnown RBP12.45□□□□□ -0.42
GTF3C1-209ENST00000568569 CLSTN1O94985 981 aa12.45□□□□□ -0.42
GTF3C1-209ENST00000568569 TBX18O95935 607 aa12.45□□□□□ -0.42
GTF3C1-209ENST00000568569 ATXN1LP0C7T5 689 aaKnown RBP12.45□□□□□ -0.42
GTF3C1-209ENST00000568569 HOXD13P35453 343 aa12.45□□□□□ -0.42
GTF3C1-209ENST00000568569 PGFP49763 221 aa12.45□□□□□ -0.42
GTF3C1-209ENST00000568569 TPMTP51580 245 aa12.45□□□□□ -0.42
GTF3C1-209ENST00000568569 CDH8P55286 799 aa12.45□□□□□ -0.42
GTF3C1-209ENST00000568569 CYP4F3Q08477 520 aa12.45□□□□□ -0.42
GTF3C1-209ENST00000568569 HLA-BQ31612 363 aa12.45□□□□□ -0.42
GTF3C1-209ENST00000568569 KLHDC10Q6PID8 442 aa12.45□□□□□ -0.42
GTF3C1-209ENST00000568569 XXYLT1Q8NBI6 393 aa12.45□□□□□ -0.42
GTF3C1-209ENST00000568569 ZMIZ2Q8NF64 920 aa12.45□□□□□ -0.42
GTF3C1-209ENST00000568569 RHBDD1Q8TEB9 315 aa12.45□□□□□ -0.42
GTF3C1-209ENST00000568569 HPS3Q969F9 1004 aa12.45□□□□□ -0.42
GTF3C1-209ENST00000568569 SIPA1Q96FS4 1042 aa12.45□□□□□ -0.42
GTF3C1-209ENST00000568569 NUP58Q9BVL2 599 aa12.45□□□□□ -0.42
GTF3C1-209ENST00000568569 SLC27A6Q9Y2P4 619 aa12.45□□□□□ -0.42
GTF3C1-209ENST00000568569 KNL1Q8NG31 2342 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 GOLGA4Q13439 2230 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 A0A087X0B3 334 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 VPS37CA5D8V6 355 aaPredicted RBP12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 TRABD2BA6NFA1 517 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 KCNJ18B7U540 433 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 TGFB1I1O43294 461 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 PHACTR2O75167 634 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 CD2BP2O95400 341 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 IGLV3-19P01714 112 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 ACADMP11310 421 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 CCDC130P13994 396 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 IL12RB1P42701 662 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 CYP2J2P51589 502 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 AFF3P51826 1226 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 MAP3K7CLP57077 242 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 SNRPFP62306 86 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 BNC1Q01954 994 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 ENPP2Q13822 863 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 SUZ12Q15022 739 aaKnown RBP12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 E2F5Q15329 346 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 ZNF699Q32M78 642 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 SCARA5Q6ZMJ2 495 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 Q6ZNB5 142 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 ACOT1Q86TX2 421 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 TMPRSS6Q8IU80 811 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 SCUBE3Q8IX30 993 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 UCMAQ8WVF2 138 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 ZNF516Q92618 1163 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 PRCCQ92733 491 aaPredicted RBP12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 SMOQ99835 787 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 PANK2Q9BZ23 570 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 LRRC27Q9C0I9 530 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 PCED1AQ9H1Q7 454 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 TNMDQ9H2S6 317 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 CSNK1G1Q9HCP0 422 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 PLK2Q9NYY3 685 aa12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 THAP10Q9P2Z0 257 aaPredicted RBP12.44□□□□□ -0.42
GTF3C1-209ENST00000568569 EIF2B4Q9UI10 523 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms