RNA–Protein interactions for RNA: ENST00000568535.1

BBS4-214, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-214ENST00000568535 SLC7A14Q8TBB6 771 aa8.57□□□□□ -1.04
BBS4-214ENST00000568535 CCHCR1Q8TD31 782 aa8.57□□□□□ -1.04
BBS4-214ENST00000568535 RNF34Q969K3 372 aa8.57□□□□□ -1.04
BBS4-214ENST00000568535 B3GALT6Q96L58 329 aa8.57□□□□□ -1.04
BBS4-214ENST00000568535 PGLYRP2Q96PD5 576 aa8.57□□□□□ -1.04
BBS4-214ENST00000568535 CDK5RAP1Q96SZ6 601 aaKnown RBP8.57□□□□□ -1.04
BBS4-214ENST00000568535 PNKPQ96T60 521 aa8.57□□□□□ -1.04
BBS4-214ENST00000568535 RAD9AQ99638 391 aa8.57□□□□□ -1.04
BBS4-214ENST00000568535 SEPT5Q99719 369 aaPredicted RBP8.57□□□□□ -1.04
BBS4-214ENST00000568535 ZNF670Q9BS34 389 aa8.57□□□□□ -1.04
BBS4-214ENST00000568535 HERC2P3Q9BVR0 1158 aa8.57□□□□□ -1.04
BBS4-214ENST00000568535 EPC1Q9H2F5 836 aa8.57□□□□□ -1.04
BBS4-214ENST00000568535 FAM204AQ9H8W3 233 aa8.57□□□□□ -1.04
BBS4-214ENST00000568535 EPB41L5Q9HCM4 733 aa8.57□□□□□ -1.04
BBS4-214ENST00000568535 GDF3Q9NR23 364 aa8.57□□□□□ -1.04
BBS4-214ENST00000568535 MRPL17Q9NRX2 175 aaKnown RBP8.57□□□□□ -1.04
BBS4-214ENST00000568535 KLHL11Q9NVR0 708 aa8.57□□□□□ -1.04
BBS4-214ENST00000568535 RCOR3Q9P2K3 495 aaPredicted RBP8.57□□□□□ -1.04
BBS4-214ENST00000568535 HCSTQ9UBK5 93 aa8.57□□□□□ -1.04
BBS4-214ENST00000568535 AFF4Q9UHB7 1163 aaKnown RBP8.57□□□□□ -1.04
BBS4-214ENST00000568535 NAALADL1Q9UQQ1 740 aa8.57□□□□□ -1.04
BBS4-214ENST00000568535 RWDD3Q9Y3V2 267 aa8.57□□□□□ -1.04
BBS4-214ENST00000568535 MRPL42Q9Y6G3 142 aaKnown RBP8.57□□□□□ -1.04
BBS4-214ENST00000568535 COL6A3P12111 3177 aa8.57□□□□□ -1.04
BBS4-214ENST00000568535 C3orf70A6NLC5 250 aaPredicted RBP8.56□□□□□ -1.04
BBS4-214ENST00000568535 CST8O60676 142 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 ZNF189O75820 626 aaPredicted RBP8.56□□□□□ -1.04
BBS4-214ENST00000568535 KRT10P13645 584 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 TGM2P21980 687 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 ELF1P32519 619 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 OR1D2P34982 312 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 ARL4AP40617 200 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 CDR1P51861 262 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 VSNL1P62760 191 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 ROR1Q01973 937 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 IFRD2Q12894 506 aaPredicted RBP8.56□□□□□ -1.04
BBS4-214ENST00000568535 DUSP4Q13115 394 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 MTA1Q13330 715 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 BYSLQ13895 437 aaKnown RBP8.56□□□□□ -1.04
BBS4-214ENST00000568535 SIX1Q15475 284 aaPredicted RBP8.56□□□□□ -1.04
BBS4-214ENST00000568535 DPYSL2Q16555 572 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 DDR2Q16832 855 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 TMEM240Q5SV17 173 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 SYPL2Q5VXT5 272 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 TXNRD3NBQ6F5E7 133 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 EMBQ6PCB8 327 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 FBXO38Q6PIJ6 1188 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 PRSS55Q6UWB4 352 aaPredicted RBP8.56□□□□□ -1.04
BBS4-214ENST00000568535 RNF19BQ6ZMZ0 732 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 BBS12Q6ZW61 710 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 PDZD4Q76G19 769 aaPredicted RBP8.56□□□□□ -1.04
BBS4-214ENST00000568535 C16orf59Q7L2K0 433 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 GSTA5Q7RTV2 222 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 TMEM173Q86WV6 379 aaPredicted RBP8.56□□□□□ -1.04
BBS4-214ENST00000568535 VPS52Q8N1B4 723 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 CCDC89Q8N998 374 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 ATAD1Q8NBU5 361 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 BBOF1Q8ND07 529 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 SCAMP5Q8TAC9 235 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 ZNF461Q8TAF7 563 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 FAM71BQ8TC56 605 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 BCL7CQ8WUZ0 217 aaPredicted RBP8.56□□□□□ -1.04
BBS4-214ENST00000568535 C1orf54Q8WWF1 131 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 IFT81Q8WYA0 676 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 HERVK_113Q902F9 699 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 NDRG1Q92597 394 aaKnown RBP8.56□□□□□ -1.04
BBS4-214ENST00000568535 P3H4Q92791 437 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 SLCO2A1Q92959 643 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 NTAN1Q96AB6 310 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 ACSF2Q96CM8 615 aaPredicted RBP8.56□□□□□ -1.04
BBS4-214ENST00000568535 CCDC114Q96M63 670 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 RNF157Q96PX1 679 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 ERP44Q9BS26 406 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 SNRNP25Q9BV90 132 aaKnown RBP8.56□□□□□ -1.04
BBS4-214ENST00000568535 FAM129AQ9BZQ8 928 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 DCLK3Q9C098 648 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 DHX35Q9H5Z1 703 aaKnown RBP8.56□□□□□ -1.04
BBS4-214ENST00000568535 WDCPQ9H6R7 721 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 TLR8Q9NR97 1041 aaKnown RBP8.56□□□□□ -1.04
BBS4-214ENST00000568535 OLA1Q9NTK5 396 aaKnown RBP8.56□□□□□ -1.04
BBS4-214ENST00000568535 TMEM30AQ9NV96 361 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 DDIT4Q9NX09 232 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.56□□□□□ -1.04
BBS4-214ENST00000568535 IL37Q9NZH6 218 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 FNIP2Q9P278 1114 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 RAPGEFL1Q9UHV5 662 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 DMGDHQ9UI17 866 aaKnown RBP8.56□□□□□ -1.04
BBS4-214ENST00000568535 FZD10Q9ULW2 581 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 AP4E1Q9UPM8 1137 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 ZNF148Q9UQR1 794 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 DRG1Q9Y295 367 aaKnown RBP8.56□□□□□ -1.04
BBS4-214ENST00000568535 NR2E1Q9Y466 385 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 CEP290O15078 2479 aa8.56□□□□□ -1.04
BBS4-214ENST00000568535 BRCA2P51587 3418 aa8.55□□□□□ -1.04
BBS4-214ENST00000568535 SCN5AQ14524 2016 aa8.55□□□□□ -1.04
BBS4-214ENST00000568535 SYNJ2BP-COX16A0A087WUM0 186 aa8.55□□□□□ -1.04
BBS4-214ENST00000568535 TCRBV7S2A1N4TA0A589 114 aa8.55□□□□□ -1.04
BBS4-214ENST00000568535 H3BRJ5 948 aa8.55□□□□□ -1.04
BBS4-214ENST00000568535 APOC4-APOC2K7ER74 178 aa8.55□□□□□ -1.04
BBS4-214ENST00000568535 C2CD2LO14523 706 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms