RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 WDR75Q8IWA0 830 aaKnown RBP16.24■□□□□ 0.19
COMMD4-215ENST00000566843 CCDC33Q8N5R6 958 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 FAM151AQ8WW52 585 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 LRRC39Q96DD0 335 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 MSTO1Q9BUK6 570 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 LHX5Q9H2C1 402 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 USP29Q9HBJ7 922 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 MAD1L1Q9Y6D9 718 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 COL4A5P29400 1685 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 FAM159BA6NKW6 160 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 BTBD19C9JJ37 291 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 UGT1A9O60656 530 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 RAD17O75943 681 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 CSH1P0DML2 217 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 CSH2P0DML3 217 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 SERPINB9P50453 376 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 YWHAEP62258 255 aaKnown RBP16.24■□□□□ 0.19
COMMD4-215ENST00000566843 TTLL12Q14166 644 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-215ENST00000566843 LRRC36Q1X8D7 754 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 TEDDM1Q5T9Z0 273 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 ADGRF2Q8IZF7 708 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 NDUFAF2Q8N183 169 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 MARVELD2Q8N4S9 558 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 PIWIL2Q8TC59 973 aaKnown RBP16.24■□□□□ 0.19
COMMD4-215ENST00000566843 PRICKLE1Q96MT3 831 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-215ENST00000566843 RMDN3Q96TC7 470 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 NIF3L1Q9GZT8 377 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 SMYD3Q9H7B4 428 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 UGT1A7Q9HAW7 530 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 UGT1A10Q9HAW8 530 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 UGT1A8Q9HAW9 530 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 CDH22Q9UJ99 828 aa16.24■□□□□ 0.19
COMMD4-215ENST00000566843 TCP10L2B9ZVM9 353 aa16.23■□□□□ 0.19
COMMD4-215ENST00000566843 H3BNX3 289 aa16.23■□□□□ 0.19
COMMD4-215ENST00000566843 DENRO43583 198 aaKnown RBP16.23■□□□□ 0.19
COMMD4-215ENST00000566843 MYL4P12829 197 aa16.23■□□□□ 0.19
COMMD4-215ENST00000566843 OSBPP22059 807 aa16.23■□□□□ 0.19
COMMD4-215ENST00000566843 MIPP30301 263 aa16.23■□□□□ 0.19
COMMD4-215ENST00000566843 GRM1Q13255 1194 aa16.23■□□□□ 0.19
COMMD4-215ENST00000566843 ACAP1Q15027 740 aa16.23■□□□□ 0.19
COMMD4-215ENST00000566843 TAF5Q15542 800 aa16.23■□□□□ 0.19
COMMD4-215ENST00000566843 OGFRL1Q5TC84 451 aaPredicted RBP16.23■□□□□ 0.19
COMMD4-215ENST00000566843 MBLAC2Q68D91 279 aa16.23■□□□□ 0.19
COMMD4-215ENST00000566843 XRRA1Q6P2D8 792 aa16.23■□□□□ 0.19
COMMD4-215ENST00000566843 FBXL19Q6PCT2 694 aa16.23■□□□□ 0.19
COMMD4-215ENST00000566843 NPNTQ6UXI9 565 aa16.23■□□□□ 0.19
COMMD4-215ENST00000566843 SLC4A11Q8NBS3 891 aa16.23■□□□□ 0.19
COMMD4-215ENST00000566843 GPRASP2Q96D09 838 aa16.23■□□□□ 0.19
COMMD4-215ENST00000566843 SDCBP2Q9H190 292 aa16.23■□□□□ 0.19
COMMD4-215ENST00000566843 RAB6BQ9NRW1 208 aa16.23■□□□□ 0.19
COMMD4-215ENST00000566843 ETNK2Q9NVF9 386 aa16.23■□□□□ 0.19
COMMD4-215ENST00000566843 HSFX1Q9UBD0 423 aa16.23■□□□□ 0.19
COMMD4-215ENST00000566843 SEPT9Q9UHD8 586 aaPredicted RBP16.23■□□□□ 0.19
COMMD4-215ENST00000566843 POMPQ9Y244 141 aa16.23■□□□□ 0.19
COMMD4-215ENST00000566843 TESPA1A2RU30 521 aaPredicted RBP16.22■□□□□ 0.19
COMMD4-215ENST00000566843 NFKBIEO00221 500 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 FAM189A1O60320 539 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 LGR5O75473 907 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 PSAPP07602 524 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 ITGA2BP08514 1039 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 GABRB2P47870 512 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 SNAPC2Q13487 334 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 SWSAP1Q6NVH7 229 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 ZCCHC23Q6ZST2 131 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 MCUQ8NE86 351 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 LENG1Q96BZ8 264 aaPredicted RBP16.22■□□□□ 0.19
COMMD4-215ENST00000566843 TARS2Q9BW92 718 aaKnown RBP16.22■□□□□ 0.19
COMMD4-215ENST00000566843 APOL6Q9BWW8 343 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 NRDE2Q9H7Z3 1164 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 RAVER2Q9HCJ3 691 aaKnown RBP16.22■□□□□ 0.19
COMMD4-215ENST00000566843 DNAJC28Q9NX36 388 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 TJP2Q9UDY2 1190 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 CYTH4Q9UIA0 394 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 APOBEC2Q9Y235 224 aaKnown RBP16.22■□□□□ 0.19
COMMD4-215ENST00000566843 DNAJC16Q9Y2G8 782 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 C15orf38-AP3S2A0A0A6YYH1 394 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 SLC15A5A6NIM6 579 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 VILLO15195 856 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 TBC1D12O60347 775 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 SIN3BO75182 1162 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 TMCC1O94876 653 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 OR6B1O95007 311 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 ALOX15P16050 662 aaPredicted RBP16.22■□□□□ 0.19
COMMD4-215ENST00000566843 RPL5P46777 297 aaKnown RBP16.22■□□□□ 0.19
COMMD4-215ENST00000566843 PSMC1P62191 440 aaKnown RBP16.22■□□□□ 0.19
COMMD4-215ENST00000566843 PRKCEQ02156 737 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 FOLH1Q04609 750 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 TBL3Q12788 808 aaKnown RBP16.22■□□□□ 0.19
COMMD4-215ENST00000566843 MYBPC3Q14896 1274 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 TRIP10Q15642 601 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 TMEM259Q4ZIN3 620 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 FASTKD1Q53R41 847 aaKnown RBP16.22■□□□□ 0.19
COMMD4-215ENST00000566843 FAM47CQ5HY64 1035 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 UNC5AQ6ZN44 842 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 DENND5BQ6ZUT9 1274 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 ARPINQ7Z6K5 226 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 KBTBD6Q86V97 674 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 WDR49Q8IV35 697 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 BRSK2Q8IWQ3 736 aa16.22■□□□□ 0.19
COMMD4-215ENST00000566843 MPP4Q96JB8 637 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms