RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 HMGB4Q8WW32 186 aa29.13■■■□□ 2.25
UBFD1-206ENST00000566669 TCEAL3Q969E4 200 aa29.13■■■□□ 2.25
UBFD1-206ENST00000566669 DCLK3Q9C098 648 aa29.13■■■□□ 2.25
UBFD1-206ENST00000566669 TMEM9BQ9NQ34 198 aa29.13■■■□□ 2.25
UBFD1-206ENST00000566669 RAB20Q9NX57 234 aa29.13■■■□□ 2.25
UBFD1-206ENST00000566669 NAGPAQ9UK23 515 aa29.13■■■□□ 2.25
UBFD1-206ENST00000566669 USP3Q9Y6I4 520 aa29.13■■■□□ 2.25
UBFD1-206ENST00000566669 NEDD8-MDP1E9PL57 170 aa29.12■■■□□ 2.25
UBFD1-206ENST00000566669 AP5Z1O43299 807 aa29.12■■■□□ 2.25
UBFD1-206ENST00000566669 ZNF217O75362 1048 aa29.12■■■□□ 2.25
UBFD1-206ENST00000566669 TBX18O95935 607 aa29.12■■■□□ 2.25
UBFD1-206ENST00000566669 HOXB2P14652 356 aa29.12■■■□□ 2.25
UBFD1-206ENST00000566669 TYRP14679 529 aa29.12■■■□□ 2.25
UBFD1-206ENST00000566669 HNRNPLP14866 589 aaKnown RBP eCLIP29.12■■■□□ 2.25
UBFD1-206ENST00000566669 CHKAP35790 457 aa29.12■■■□□ 2.25
UBFD1-206ENST00000566669 SHC2P98077 582 aa29.12■■■□□ 2.25
UBFD1-206ENST00000566669 RABEPKQ7Z6M1 372 aa29.12■■■□□ 2.25
UBFD1-206ENST00000566669 SYT12Q8IV01 421 aa29.12■■■□□ 2.25
UBFD1-206ENST00000566669 HEXIM2Q96MH2 286 aaKnown RBP29.12■■■□□ 2.25
UBFD1-206ENST00000566669 A0A1W2PQH9 124 aa29.11■■■□□ 2.25
UBFD1-206ENST00000566669 GFRA2O00451 464 aa29.11■■■□□ 2.25
UBFD1-206ENST00000566669 NPC1O15118 1278 aa29.11■■■□□ 2.25
UBFD1-206ENST00000566669 KCNK5O95279 499 aa29.11■■■□□ 2.25
UBFD1-206ENST00000566669 PGFP49763 221 aa29.11■■■□□ 2.25
UBFD1-206ENST00000566669 MAP7D1Q3KQU3 841 aa29.11■■■□□ 2.25
UBFD1-206ENST00000566669 COBLL1Q53SF7 1204 aa29.11■■■□□ 2.25
UBFD1-206ENST00000566669 JAKMIP2Q96AA8 810 aa29.11■■■□□ 2.25
UBFD1-206ENST00000566669 TMEM176AQ96HP8 235 aa29.11■■■□□ 2.25
UBFD1-206ENST00000566669 TSG101Q99816 390 aa29.11■■■□□ 2.25
UBFD1-206ENST00000566669 NUSAP1Q9BXS6 441 aaKnown RBP29.11■■■□□ 2.25
UBFD1-206ENST00000566669 MMRN2Q9H8L6 949 aa29.11■■■□□ 2.25
UBFD1-206ENST00000566669 OSER1Q9NX31 292 aa29.11■■■□□ 2.25
UBFD1-206ENST00000566669 CIZ1Q9ULV3 898 aaPredicted RBP29.11■■■□□ 2.25
UBFD1-206ENST00000566669 MYH10P35580 1976 aa29.1■■■□□ 2.25
UBFD1-206ENST00000566669 PMLP29590 882 aa29.1■■■□□ 2.25
UBFD1-206ENST00000566669 PPP1R26Q5T8A7 1209 aaPredicted RBP29.1■■■□□ 2.25
UBFD1-206ENST00000566669 N4BP2L1Q5TBK1 243 aaPredicted RBP29.1■■■□□ 2.25
UBFD1-206ENST00000566669 Q6ZNB5 142 aa29.1■■■□□ 2.25
UBFD1-206ENST00000566669 CEP76Q8TAP6 659 aa29.1■■■□□ 2.25
UBFD1-206ENST00000566669 PIGKQ92643 395 aa29.1■■■□□ 2.25
UBFD1-206ENST00000566669 GSDMAQ96QA5 445 aa29.1■■■□□ 2.25
UBFD1-206ENST00000566669 NMUR1Q9HB89 426 aa29.1■■■□□ 2.25
UBFD1-206ENST00000566669 CISHQ9NSE2 258 aa29.1■■■□□ 2.25
UBFD1-206ENST00000566669 C4orf47A7E2U8 309 aa29.09■■■□□ 2.25
UBFD1-206ENST00000566669 SLC16A3O15427 465 aaKnown RBP29.09■■■□□ 2.25
UBFD1-206ENST00000566669 DGKGP49619 791 aa29.09■■■□□ 2.25
UBFD1-206ENST00000566669 ZNF132P52740 706 aa29.09■■■□□ 2.25
UBFD1-206ENST00000566669 YWHAEP62258 255 aaKnown RBP29.09■■■□□ 2.25
UBFD1-206ENST00000566669 LYSMD4Q5XG99 296 aa29.09■■■□□ 2.25
UBFD1-206ENST00000566669 ARHGAP17Q68EM7 881 aa29.09■■■□□ 2.25
UBFD1-206ENST00000566669 CHPFQ8IZ52 775 aa29.09■■■□□ 2.25
UBFD1-206ENST00000566669 WBP2Q969T9 261 aa29.09■■■□□ 2.25
UBFD1-206ENST00000566669 GOLPH3LQ9H4A5 285 aa29.09■■■□□ 2.25
UBFD1-206ENST00000566669 HOOK1Q9UJC3 728 aaKnown RBP29.09■■■□□ 2.25
UBFD1-206ENST00000566669 CHD8Q9HCK8 2581 aa29.08■■■□□ 2.25
UBFD1-206ENST00000566669 MYOFQ9NZM1 2061 aa29.08■■■□□ 2.25
UBFD1-206ENST00000566669 ABCA7Q8IZY2 2146 aa29.08■■■□□ 2.25
UBFD1-206ENST00000566669 CACNA1BQ00975 2339 aa29.08■■■□□ 2.25
UBFD1-206ENST00000566669 ANTXRLA6NF34 631 aa29.08■■■□□ 2.25
UBFD1-206ENST00000566669 TPGS1Q6ZTW0 290 aa29.08■■■□□ 2.25
UBFD1-206ENST00000566669 RLN3Q8WXF3 142 aa29.08■■■□□ 2.25
UBFD1-206ENST00000566669 GABRG3Q99928 467 aa29.08■■■□□ 2.25
UBFD1-206ENST00000566669 STRIP2Q9ULQ0 834 aa29.08■■■□□ 2.25
UBFD1-206ENST00000566669 GOLGA6L4A6NEF3 574 aa29.07■■■□□ 2.24
UBFD1-206ENST00000566669 STC2O76061 302 aa29.07■■■□□ 2.24
UBFD1-206ENST00000566669 SMC2O95347 1197 aa29.07■■■□□ 2.24
UBFD1-206ENST00000566669 CSRP1P21291 193 aaKnown RBP29.07■■■□□ 2.24
UBFD1-206ENST00000566669 FKBP3Q00688 224 aaKnown RBP29.07■■■□□ 2.24
UBFD1-206ENST00000566669 PEAR1Q5VY43 1037 aaPredicted RBP29.07■■■□□ 2.24
UBFD1-206ENST00000566669 THADAQ6YHU6 1953 aa29.07■■■□□ 2.24
UBFD1-206ENST00000566669 SCD5Q86SK9 330 aa29.07■■■□□ 2.24
UBFD1-206ENST00000566669 ANKRD52Q8NB46 1076 aa29.07■■■□□ 2.24
UBFD1-206ENST00000566669 CHAMP1Q96JM3 812 aa29.07■■■□□ 2.24
UBFD1-206ENST00000566669 FBXO10Q9UK96 956 aa29.07■■■□□ 2.24
UBFD1-206ENST00000566669 SLC27A6Q9Y2P4 619 aa29.07■■■□□ 2.24
UBFD1-206ENST00000566669 NUP205Q92621 2012 aa29.06■■■□□ 2.24
UBFD1-206ENST00000566669 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa29.06■■■□□ 2.24
UBFD1-206ENST00000566669 CEACAM1P13688 526 aa29.06■■■□□ 2.24
UBFD1-206ENST00000566669 GABRG2P18507 467 aa29.06■■■□□ 2.24
UBFD1-206ENST00000566669 ZNF394Q53GI3 561 aa29.06■■■□□ 2.24
UBFD1-206ENST00000566669 TRIM61Q5EBN2 209 aa29.06■■■□□ 2.24
UBFD1-206ENST00000566669 ZNF658Q5TYW1 1059 aaPredicted RBP29.06■■■□□ 2.24
UBFD1-206ENST00000566669 MIB1Q86YT6 1006 aa29.06■■■□□ 2.24
UBFD1-206ENST00000566669 TMEFF1Q8IYR6 380 aa29.06■■■□□ 2.24
UBFD1-206ENST00000566669 SLC4A11Q8NBS3 891 aa29.06■■■□□ 2.24
UBFD1-206ENST00000566669 MBD1Q9UIS9 605 aaPredicted RBP29.06■■■□□ 2.24
UBFD1-206ENST00000566669 COQ4Q9Y3A0 265 aa29.06■■■□□ 2.24
UBFD1-206ENST00000566669 PLXND1Q9Y4D7 1925 aa29.05■■■□□ 2.24
UBFD1-206ENST00000566669 CYBBP04839 570 aa29.05■■■□□ 2.24
UBFD1-206ENST00000566669 NOVA1P51513 510 aaKnown RBP29.05■■■□□ 2.24
UBFD1-206ENST00000566669 RAD23BP54727 409 aa29.05■■■□□ 2.24
UBFD1-206ENST00000566669 IRX4P78413 519 aa29.05■■■□□ 2.24
UBFD1-206ENST00000566669 LRRC63Q05C16 580 aa29.05■■■□□ 2.24
UBFD1-206ENST00000566669 RAB41Q5JT25 222 aa29.05■■■□□ 2.24
UBFD1-206ENST00000566669 PSAPL1Q6NUJ1 521 aa29.05■■■□□ 2.24
UBFD1-206ENST00000566669 SLC23A3Q6PIS1 610 aa29.05■■■□□ 2.24
UBFD1-206ENST00000566669 IPO4Q8TEX9 1081 aaKnown RBP29.05■■■□□ 2.24
UBFD1-206ENST00000566669 SEMA4DQ92854 862 aa29.05■■■□□ 2.24
UBFD1-206ENST00000566669 OLA1Q9NTK5 396 aaKnown RBP29.05■■■□□ 2.24
UBFD1-206ENST00000566669 KIAA1257Q9ULG3 409 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms