RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 MSANTD3Q96H12 275 aa27.34■■□□□ 1.97
NME3-209ENST00000566600 MDM4O15151 490 aa27.33■■□□□ 1.97
NME3-209ENST00000566600 ERBB2P04626 1255 aa27.33■■□□□ 1.97
NME3-209ENST00000566600 PRKCIP41743 596 aa27.33■■□□□ 1.97
NME3-209ENST00000566600 ITPRIPL2Q3MIP1 535 aa27.33■■□□□ 1.97
NME3-209ENST00000566600 OR6B2Q6IFH4 312 aa27.33■■□□□ 1.97
NME3-209ENST00000566600 MSANTD2Q6P1R3 559 aa27.33■■□□□ 1.97
NME3-209ENST00000566600 BMP8AQ7Z5Y6 402 aa27.33■■□□□ 1.97
NME3-209ENST00000566600 VSTM4Q8IW00 320 aa27.33■■□□□ 1.97
NME3-209ENST00000566600 CPLX3Q8WVH0 158 aa27.33■■□□□ 1.97
NME3-209ENST00000566600 CPA5Q8WXQ8 436 aa27.33■■□□□ 1.97
NME3-209ENST00000566600 OTUB2Q96DC9 234 aa27.33■■□□□ 1.97
NME3-209ENST00000566600 TRIM5Q9C035 493 aa27.33■■□□□ 1.97
NME3-209ENST00000566600 MFSD1Q9H3U5 465 aa27.33■■□□□ 1.97
NME3-209ENST00000566600 C8orf33Q9H7E9 229 aaPredicted RBP27.33■■□□□ 1.97
NME3-209ENST00000566600 POPDC2Q9HBU9 364 aa27.33■■□□□ 1.97
NME3-209ENST00000566600 HEBP1Q9NRV9 189 aa27.33■■□□□ 1.97
NME3-209ENST00000566600 SEPT11Q9NVA2 429 aaKnown RBP27.33■■□□□ 1.97
NME3-209ENST00000566600 TJP2Q9UDY2 1190 aa27.33■■□□□ 1.97
NME3-209ENST00000566600 WNT6Q9Y6F9 365 aa27.33■■□□□ 1.97
NME3-209ENST00000566600 TECTAO75443 2155 aa27.33■■□□□ 1.97
NME3-209ENST00000566600 CAPN9O14815 690 aa27.32■■□□□ 1.96
NME3-209ENST00000566600 IRF1P10914 325 aa27.32■■□□□ 1.96
NME3-209ENST00000566600 NCAM1P13591 858 aa27.32■■□□□ 1.96
NME3-209ENST00000566600 KPNA1P52294 538 aaPredicted RBP27.32■■□□□ 1.96
NME3-209ENST00000566600 SLC6A3Q01959 620 aa27.32■■□□□ 1.96
NME3-209ENST00000566600 RUNX3Q13761 415 aa27.32■■□□□ 1.96
NME3-209ENST00000566600 TMEM31Q5JXX7 168 aa27.32■■□□□ 1.96
NME3-209ENST00000566600 C1orf228Q6PIY5 440 aa27.32■■□□□ 1.96
NME3-209ENST00000566600 HTR3DQ70Z44 454 aa27.32■■□□□ 1.96
NME3-209ENST00000566600 GAS2L3Q86XJ1 694 aa27.32■■□□□ 1.96
NME3-209ENST00000566600 CPA6Q8N4T0 437 aa27.32■■□□□ 1.96
NME3-209ENST00000566600 DCLK3Q9C098 648 aa27.32■■□□□ 1.96
NME3-209ENST00000566600 HBS1LQ9Y450 684 aaKnown RBP27.32■■□□□ 1.96
NME3-209ENST00000566600 BZW2Q9Y6E2 419 aaKnown RBP27.32■■□□□ 1.96
NME3-209ENST00000566600 KRBA1A5PL33 1030 aa27.31■■□□□ 1.96
NME3-209ENST00000566600 HSF2BPO75031 334 aa27.31■■□□□ 1.96
NME3-209ENST00000566600 NFATC1O95644 943 aa27.31■■□□□ 1.96
NME3-209ENST00000566600 GYPCP04921 128 aa27.31■■□□□ 1.96
NME3-209ENST00000566600 TPM1P09493 284 aa27.31■■□□□ 1.96
NME3-209ENST00000566600 TNFAIP3P21580 790 aa27.31■■□□□ 1.96
NME3-209ENST00000566600 SCNN1AP37088 669 aa27.31■■□□□ 1.96
NME3-209ENST00000566600 NSFP46459 744 aaKnown RBP27.31■■□□□ 1.96
NME3-209ENST00000566600 KLHL30Q0D2K2 578 aa27.31■■□□□ 1.96
NME3-209ENST00000566600 NR1H3Q13133 447 aa27.31■■□□□ 1.96
NME3-209ENST00000566600 CLEC16AQ2KHT3 1053 aa27.31■■□□□ 1.96
NME3-209ENST00000566600 EML3Q32P44 896 aa27.31■■□□□ 1.96
NME3-209ENST00000566600 PPP1R2P3Q6NXS1 205 aa27.31■■□□□ 1.96
NME3-209ENST00000566600 OLFML1Q6UWY5 402 aa27.31■■□□□ 1.96
NME3-209ENST00000566600 FAM183BPQ6ZVS7 135 aa27.31■■□□□ 1.96
NME3-209ENST00000566600 PBXIP1Q96AQ6 731 aa27.31■■□□□ 1.96
NME3-209ENST00000566600 EBF3Q9H4W6 596 aa27.31■■□□□ 1.96
NME3-209ENST00000566600 GTSE1Q9NYZ3 720 aa27.31■■□□□ 1.96
NME3-209ENST00000566600 ZNF510Q9Y2H8 683 aa27.31■■□□□ 1.96
NME3-209ENST00000566600 PIAS3Q9Y6X2 628 aa27.31■■□□□ 1.96
NME3-209ENST00000566600 TICRRQ7Z2Z1 1910 aa27.31■■□□□ 1.96
NME3-209ENST00000566600 SLC12A8A0AV02 714 aa27.3■■□□□ 1.96
NME3-209ENST00000566600 PRR33A8MZF0 331 aa27.3■■□□□ 1.96
NME3-209ENST00000566600 MAN2B1O00754 1011 aa27.3■■□□□ 1.96
NME3-209ENST00000566600 UNGP13051 313 aaPredicted RBP27.3■■□□□ 1.96
NME3-209ENST00000566600 STARD6P59095 220 aa27.3■■□□□ 1.96
NME3-209ENST00000566600 AMPD2Q01433 879 aa27.3■■□□□ 1.96
NME3-209ENST00000566600 CENPCQ03188 943 aa27.3■■□□□ 1.96
NME3-209ENST00000566600 TNK2Q07912 1038 aa27.3■■□□□ 1.96
NME3-209ENST00000566600 TRIM68Q6AZZ1 485 aa27.3■■□□□ 1.96
NME3-209ENST00000566600 SLC26A9Q7LBE3 791 aa27.3■■□□□ 1.96
NME3-209ENST00000566600 PLD4Q96BZ4 506 aa27.3■■□□□ 1.96
NME3-209ENST00000566600 PCDHB18PQ96TA0 734 aa27.3■■□□□ 1.96
NME3-209ENST00000566600 HAUS4Q9H6D7 363 aa27.3■■□□□ 1.96
NME3-209ENST00000566600 HPS4Q9NQG7 708 aa27.3■■□□□ 1.96
NME3-209ENST00000566600 STC2O76061 302 aa27.29■■□□□ 1.96
NME3-209ENST00000566600 FYNP06241 537 aa27.29■■□□□ 1.96
NME3-209ENST00000566600 ARSAP15289 507 aa27.29■■□□□ 1.96
NME3-209ENST00000566600 MMP8P22894 467 aa27.29■■□□□ 1.96
NME3-209ENST00000566600 CASP14P31944 242 aa27.29■■□□□ 1.96
NME3-209ENST00000566600 TPRG1Q6ZUI0 275 aa27.29■■□□□ 1.96
NME3-209ENST00000566600 RALGPS2Q86X27 583 aaPredicted RBP27.29■■□□□ 1.96
NME3-209ENST00000566600 XYLT1Q86Y38 959 aa27.29■■□□□ 1.96
NME3-209ENST00000566600 SYT11Q9BT88 431 aa27.29■■□□□ 1.96
NME3-209ENST00000566600 LINC00597Q9H2U6 94 aa27.29■■□□□ 1.96
NME3-209ENST00000566600 C11orf16Q9NQ32 467 aa27.29■■□□□ 1.96
NME3-209ENST00000566600 NAALADL1Q9UQQ1 740 aa27.29■■□□□ 1.96
NME3-209ENST00000566600 COL4A2P08572 1712 aa27.29■■□□□ 1.96
NME3-209ENST00000566600 FAM86C2PA6NEL3 165 aa27.28■■□□□ 1.96
NME3-209ENST00000566600 IER5LQ5T953 404 aa27.28■■□□□ 1.96
NME3-209ENST00000566600 E4F1Q66K89 784 aaPredicted RBP27.28■■□□□ 1.96
NME3-209ENST00000566600 ZNF852Q6ZMS4 543 aa27.28■■□□□ 1.96
NME3-209ENST00000566600 PHF13Q86YI8 300 aaPredicted RBP27.28■■□□□ 1.96
NME3-209ENST00000566600 ADGRG2Q8IZP9 1017 aa27.28■■□□□ 1.96
NME3-209ENST00000566600 PIWIL1Q96J94 861 aaKnown RBP27.28■■□□□ 1.96
NME3-209ENST00000566600 SERPINB11Q96P15 392 aa27.28■■□□□ 1.96
NME3-209ENST00000566600 NELL2Q99435 816 aa27.28■■□□□ 1.96
NME3-209ENST00000566600 DDX23Q9BUQ8 820 aaKnown RBP27.28■■□□□ 1.96
NME3-209ENST00000566600 ECT2Q9H8V3 914 aa27.28■■□□□ 1.96
NME3-209ENST00000566600 TBC1D17Q9HA65 648 aa27.28■■□□□ 1.96
NME3-209ENST00000566600 SFMBT1Q9UHJ3 866 aa27.28■■□□□ 1.96
NME3-209ENST00000566600 MRPS17Q9Y2R5 130 aaKnown RBP27.28■■□□□ 1.96
NME3-209ENST00000566600 STK25O00506 426 aa27.27■■□□□ 1.96
NME3-209ENST00000566600 CALB1P05937 261 aa27.27■■□□□ 1.96
NME3-209ENST00000566600 HMBSP08397 361 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms