RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 PLA2G4AP47712 749 aa12.58□□□□□ -0.4
UBR1-206ENST00000566493 PGFP49763 221 aa12.58□□□□□ -0.4
UBR1-206ENST00000566493 PPP3CAQ08209 521 aa12.58□□□□□ -0.4
UBR1-206ENST00000566493 C10orf120Q5SQS8 335 aa12.58□□□□□ -0.4
UBR1-206ENST00000566493 KRT39Q6A163 491 aa12.58□□□□□ -0.4
UBR1-206ENST00000566493 GPRIN1Q7Z2K8 1008 aa12.58□□□□□ -0.4
UBR1-206ENST00000566493 RLN3Q8WXF3 142 aa12.58□□□□□ -0.4
UBR1-206ENST00000566493 WBP2Q969T9 261 aa12.58□□□□□ -0.4
UBR1-206ENST00000566493 HEXIM2Q96MH2 286 aaKnown RBP12.58□□□□□ -0.4
UBR1-206ENST00000566493 BBS2Q9BXC9 721 aa12.58□□□□□ -0.4
UBR1-206ENST00000566493 DUSP16Q9BY84 665 aa12.58□□□□□ -0.4
UBR1-206ENST00000566493 APOBEC3GQ9HC16 384 aaKnown RBP12.58□□□□□ -0.4
UBR1-206ENST00000566493 PNPLA8Q9NP80 782 aa12.58□□□□□ -0.4
UBR1-206ENST00000566493 TMEM9BQ9NQ34 198 aa12.58□□□□□ -0.4
UBR1-206ENST00000566493 CYLDQ9NQC7 956 aa12.58□□□□□ -0.4
UBR1-206ENST00000566493 NAGPAQ9UK23 515 aa12.58□□□□□ -0.4
UBR1-206ENST00000566493 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.57□□□□□ -0.4
UBR1-206ENST00000566493 A0A1W2PQ27 194 aa12.57□□□□□ -0.4
UBR1-206ENST00000566493 A0A1W2PQ64 194 aa12.57□□□□□ -0.4
UBR1-206ENST00000566493 A0A1W2PQD8 194 aa12.57□□□□□ -0.4
UBR1-206ENST00000566493 LNP1A1A4G5 178 aa12.57□□□□□ -0.4
UBR1-206ENST00000566493 HHLA1C9JL84 531 aa12.57□□□□□ -0.4
UBR1-206ENST00000566493 CILPO75339 1184 aa12.57□□□□□ -0.4
UBR1-206ENST00000566493 ZNF202O95125 648 aa12.57□□□□□ -0.4
UBR1-206ENST00000566493 RALAP11233 206 aa12.57□□□□□ -0.4
UBR1-206ENST00000566493 HOXB2P14652 356 aa12.57□□□□□ -0.4
UBR1-206ENST00000566493 TYRP14679 529 aa12.57□□□□□ -0.4
UBR1-206ENST00000566493 NTSR1P30989 418 aa12.57□□□□□ -0.4
UBR1-206ENST00000566493 SPDYCQ5MJ68 293 aa12.57□□□□□ -0.4
UBR1-206ENST00000566493 PSAPL1Q6NUJ1 521 aa12.57□□□□□ -0.4
UBR1-206ENST00000566493 KLHDC10Q6PID8 442 aa12.57□□□□□ -0.4
UBR1-206ENST00000566493 TPGS1Q6ZTW0 290 aa12.57□□□□□ -0.4
UBR1-206ENST00000566493 ARMCX6Q7L4S7 300 aa12.57□□□□□ -0.4
UBR1-206ENST00000566493 TMEFF1Q8IYR6 380 aa12.57□□□□□ -0.4
UBR1-206ENST00000566493 CDK5RAP1Q96SZ6 601 aaKnown RBP12.57□□□□□ -0.4
UBR1-206ENST00000566493 NUSAP1Q9BXS6 441 aaKnown RBP12.57□□□□□ -0.4
UBR1-206ENST00000566493 NMUR1Q9HB89 426 aa12.57□□□□□ -0.4
UBR1-206ENST00000566493 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.57□□□□□ -0.4
UBR1-206ENST00000566493 OSER1Q9NX31 292 aa12.57□□□□□ -0.4
UBR1-206ENST00000566493 ZDHHC9Q9Y397 364 aa12.57□□□□□ -0.4
UBR1-206ENST00000566493 STARD13Q9Y3M8 1113 aa12.57□□□□□ -0.4
UBR1-206ENST00000566493 SPTBN2O15020 2390 aa12.56□□□□□ -0.4
UBR1-206ENST00000566493 PATE3B3GLJ2 98 aa12.56□□□□□ -0.4
UBR1-206ENST00000566493 CETN3O15182 167 aa12.56□□□□□ -0.4
UBR1-206ENST00000566493 CACNG3O60359 315 aa12.56□□□□□ -0.4
UBR1-206ENST00000566493 EPB41P11171 864 aaKnown RBP12.56□□□□□ -0.4
UBR1-206ENST00000566493 WASP42768 502 aa12.56□□□□□ -0.4
UBR1-206ENST00000566493 NOVA1P51513 510 aaKnown RBP12.56□□□□□ -0.4
UBR1-206ENST00000566493 KIF11P52732 1056 aa12.56□□□□□ -0.4
UBR1-206ENST00000566493 SLC8A3P57103 927 aa12.56□□□□□ -0.4
UBR1-206ENST00000566493 LMAN2Q12907 356 aa12.56□□□□□ -0.4
UBR1-206ENST00000566493 ST3GAL2Q16842 350 aa12.56□□□□□ -0.4
UBR1-206ENST00000566493 EDRF1Q3B7T1 1238 aa12.56□□□□□ -0.4
UBR1-206ENST00000566493 MAP7D1Q3KQU3 841 aa12.56□□□□□ -0.4
UBR1-206ENST00000566493 ZNF394Q53GI3 561 aa12.56□□□□□ -0.4
UBR1-206ENST00000566493 PPP1R26Q5T8A7 1209 aaPredicted RBP12.56□□□□□ -0.4
UBR1-206ENST00000566493 LYSMD4Q5XG99 296 aa12.56□□□□□ -0.4
UBR1-206ENST00000566493 SLC36A4Q6YBV0 504 aa12.56□□□□□ -0.4
UBR1-206ENST00000566493 CCDC186Q7Z3E2 898 aa12.56□□□□□ -0.4
UBR1-206ENST00000566493 MIB1Q86YT6 1006 aa12.56□□□□□ -0.4
UBR1-206ENST00000566493 SYT12Q8IV01 421 aa12.56□□□□□ -0.4
UBR1-206ENST00000566493 CHPFQ8IZ52 775 aa12.56□□□□□ -0.4
UBR1-206ENST00000566493 FRMD1Q8N878 549 aa12.56□□□□□ -0.4
UBR1-206ENST00000566493 FAXDC2Q96IV6 333 aa12.56□□□□□ -0.4
UBR1-206ENST00000566493 RMND1Q9NWS8 449 aa12.56□□□□□ -0.4
UBR1-206ENST00000566493 CLIC5Q9NZA1 410 aa12.56□□□□□ -0.4
UBR1-206ENST00000566493 MARK1Q9P0L2 795 aa12.56□□□□□ -0.4
UBR1-206ENST00000566493 EVLQ9UI08 416 aaPredicted RBP12.56□□□□□ -0.4
UBR1-206ENST00000566493 MBD1Q9UIS9 605 aaPredicted RBP12.56□□□□□ -0.4
UBR1-206ENST00000566493 NUDT5Q9UKK9 219 aa12.56□□□□□ -0.4
UBR1-206ENST00000566493 ZNF510Q9Y2H8 683 aa12.56□□□□□ -0.4
UBR1-206ENST00000566493 MYO18AQ92614 2054 aaKnown RBP12.56□□□□□ -0.4
UBR1-206ENST00000566493 PLXND1Q9Y4D7 1925 aa12.55□□□□□ -0.4
UBR1-206ENST00000566493 MDM4O15151 490 aa12.55□□□□□ -0.4
UBR1-206ENST00000566493 TRIM24O15164 1050 aa12.55□□□□□ -0.4
UBR1-206ENST00000566493 AP5Z1O43299 807 aa12.55□□□□□ -0.4
UBR1-206ENST00000566493 GREM1O60565 184 aa12.55□□□□□ -0.4
UBR1-206ENST00000566493 PMLP29590 882 aa12.55□□□□□ -0.4
UBR1-206ENST00000566493 DGKGP49619 791 aa12.55□□□□□ -0.4
UBR1-206ENST00000566493 MXI1P50539 228 aa12.55□□□□□ -0.4
UBR1-206ENST00000566493 IRX4P78413 519 aa12.55□□□□□ -0.4
UBR1-206ENST00000566493 COG7P83436 770 aa12.55□□□□□ -0.4
UBR1-206ENST00000566493 RPL6Q02878 288 aaKnown RBP12.55□□□□□ -0.4
UBR1-206ENST00000566493 UAP1L1Q3KQV9 507 aa12.55□□□□□ -0.4
UBR1-206ENST00000566493 TRIM61Q5EBN2 209 aa12.55□□□□□ -0.4
UBR1-206ENST00000566493 EGFLAMQ63HQ2 1017 aa12.55□□□□□ -0.4
UBR1-206ENST00000566493 ARHGAP18Q8N392 663 aa12.55□□□□□ -0.4
UBR1-206ENST00000566493 ZNF276Q8N554 614 aa12.55□□□□□ -0.4
UBR1-206ENST00000566493 FBXL13Q8NEE6 735 aa12.55□□□□□ -0.4
UBR1-206ENST00000566493 BHMTQ93088 406 aa12.55□□□□□ -0.4
UBR1-206ENST00000566493 TMEM176AQ96HP8 235 aa12.55□□□□□ -0.4
UBR1-206ENST00000566493 TSG101Q99816 390 aa12.55□□□□□ -0.4
UBR1-206ENST00000566493 DCLK3Q9C098 648 aa12.55□□□□□ -0.4
UBR1-206ENST00000566493 GOLPH3LQ9H4A5 285 aa12.55□□□□□ -0.4
UBR1-206ENST00000566493 CISHQ9NSE2 258 aa12.55□□□□□ -0.4
UBR1-206ENST00000566493 RAB20Q9NX57 234 aa12.55□□□□□ -0.4
UBR1-206ENST00000566493 RASAL2Q9UJF2 1139 aa12.55□□□□□ -0.4
UBR1-206ENST00000566493 LAMA1P25391 3075 aa12.55□□□□□ -0.4
UBR1-206ENST00000566493 CEP192Q8TEP8 1941 aa12.54□□□□□ -0.4
UBR1-206ENST00000566493 GOLGA6L4A6NEF3 574 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms