RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 TRIM49BA6NDI0 452 aa21.21■□□□□ 0.99
CLN6-207ENST00000566347 SGK1O00141 431 aa21.21■□□□□ 0.99
CLN6-207ENST00000566347 DCLK1O15075 740 aa21.21■□□□□ 0.99
CLN6-207ENST00000566347 GDF9O60383 454 aa21.21■□□□□ 0.99
CLN6-207ENST00000566347 LIMK1P53667 647 aa21.21■□□□□ 0.99
CLN6-207ENST00000566347 CUL2Q13617 745 aa21.21■□□□□ 0.99
CLN6-207ENST00000566347 EMC10Q5UCC4 262 aa21.21■□□□□ 0.99
CLN6-207ENST00000566347 GRAMD4Q6IC98 578 aa21.21■□□□□ 0.99
CLN6-207ENST00000566347 SCD5Q86SK9 330 aa21.21■□□□□ 0.99
CLN6-207ENST00000566347 ANKRD52Q8NB46 1076 aa21.21■□□□□ 0.99
CLN6-207ENST00000566347 SLC35C1Q96A29 364 aa21.21■□□□□ 0.99
CLN6-207ENST00000566347 CEP63Q96MT8 703 aa21.21■□□□□ 0.99
CLN6-207ENST00000566347 BBS2Q9BXC9 721 aa21.21■□□□□ 0.99
CLN6-207ENST00000566347 ZNF510Q9Y2H8 683 aa21.21■□□□□ 0.99
CLN6-207ENST00000566347 NEDD8-MDP1E9PL57 170 aa21.2■□□□□ 0.98
CLN6-207ENST00000566347 MDM4O15151 490 aa21.2■□□□□ 0.98
CLN6-207ENST00000566347 CACNG3O60359 315 aa21.2■□□□□ 0.98
CLN6-207ENST00000566347 TYRP14679 529 aa21.2■□□□□ 0.98
CLN6-207ENST00000566347 TBXAS1P24557 533 aaPredicted RBP21.2■□□□□ 0.98
CLN6-207ENST00000566347 COG7P83436 770 aa21.2■□□□□ 0.98
CLN6-207ENST00000566347 SF3A2Q15428 464 aaKnown RBP21.2■□□□□ 0.98
CLN6-207ENST00000566347 CCDC6Q16204 474 aa21.2■□□□□ 0.98
CLN6-207ENST00000566347 C10orf76Q5T2E6 689 aa21.2■□□□□ 0.98
CLN6-207ENST00000566347 PIGZQ86VD9 579 aa21.2■□□□□ 0.98
CLN6-207ENST00000566347 TTC30AQ86WT1 665 aa21.2■□□□□ 0.98
CLN6-207ENST00000566347 ZNF513Q8N8E2 541 aaPredicted RBP21.2■□□□□ 0.98
CLN6-207ENST00000566347 DNAJC17Q9NVM6 304 aaKnown RBP21.2■□□□□ 0.98
CLN6-207ENST00000566347 NUDT5Q9UKK9 219 aa21.2■□□□□ 0.98
CLN6-207ENST00000566347 ADAM23O75077 832 aa21.19■□□□□ 0.98
CLN6-207ENST00000566347 HNRNPLP14866 589 aaKnown RBP eCLIP21.19■□□□□ 0.98
CLN6-207ENST00000566347 CREB5Q02930 508 aa21.19■□□□□ 0.98
CLN6-207ENST00000566347 SGO2Q562F6 1265 aa21.19■□□□□ 0.98
CLN6-207ENST00000566347 RAB41Q5JT25 222 aa21.19■□□□□ 0.98
CLN6-207ENST00000566347 PMS2CLQ68D20 193 aa21.19■□□□□ 0.98
CLN6-207ENST00000566347 Q6ZNB5 142 aa21.19■□□□□ 0.98
CLN6-207ENST00000566347 TPGS1Q6ZTW0 290 aa21.19■□□□□ 0.98
CLN6-207ENST00000566347 MIB1Q86YT6 1006 aa21.19■□□□□ 0.98
CLN6-207ENST00000566347 OLIG1Q8TAK6 271 aa21.19■□□□□ 0.98
CLN6-207ENST00000566347 DDX1Q92499 740 aaKnown RBP21.19■□□□□ 0.98
CLN6-207ENST00000566347 DCLK3Q9C098 648 aa21.19■□□□□ 0.98
CLN6-207ENST00000566347 BCCIPQ9P287 314 aaKnown RBP eCLIP21.19■□□□□ 0.98
CLN6-207ENST00000566347 HESX1Q9UBX0 185 aa21.19■□□□□ 0.98
CLN6-207ENST00000566347 MAN1B1Q9UKM7 699 aa21.19■□□□□ 0.98
CLN6-207ENST00000566347 STARD13Q9Y3M8 1113 aa21.19■□□□□ 0.98
CLN6-207ENST00000566347 BCLAF3A2AJT9 711 aaKnown RBP21.18■□□□□ 0.98
CLN6-207ENST00000566347 STC2O76061 302 aa21.18■□□□□ 0.98
CLN6-207ENST00000566347 FMO5P49326 533 aa21.18■□□□□ 0.98
CLN6-207ENST00000566347 BCAT1P54687 386 aa21.18■□□□□ 0.98
CLN6-207ENST00000566347 BYSLQ13895 437 aaKnown RBP21.18■□□□□ 0.98
CLN6-207ENST00000566347 GOLGA7BQ2TAP0 167 aa21.18■□□□□ 0.98
CLN6-207ENST00000566347 IL31Q6EBC2 164 aa21.18■□□□□ 0.98
CLN6-207ENST00000566347 FOXR2Q6PJQ5 311 aa21.18■□□□□ 0.98
CLN6-207ENST00000566347 ABCA7Q8IZY2 2146 aa21.18■□□□□ 0.98
CLN6-207ENST00000566347 SPACA7Q96KW9 195 aa21.18■□□□□ 0.98
CLN6-207ENST00000566347 RASAL2Q9UJF2 1139 aa21.18■□□□□ 0.98
CLN6-207ENST00000566347 TSPAN16Q9UKR8 245 aa21.18■□□□□ 0.98
CLN6-207ENST00000566347 KIAA1257Q9ULG3 409 aa21.18■□□□□ 0.98
CLN6-207ENST00000566347 INVSQ9Y283 1065 aa21.18■□□□□ 0.98
CLN6-207ENST00000566347 THADAQ6YHU6 1953 aa21.17■□□□□ 0.98
CLN6-207ENST00000566347 XPO1O14980 1071 aaKnown RBP21.17■□□□□ 0.98
CLN6-207ENST00000566347 PMM2O15305 246 aa21.17■□□□□ 0.98
CLN6-207ENST00000566347 CAVIN2O95810 425 aa21.17■□□□□ 0.98
CLN6-207ENST00000566347 TKTL1P51854 596 aa21.17■□□□□ 0.98
CLN6-207ENST00000566347 YWHAGP61981 247 aaKnown RBP eCLIP21.17■□□□□ 0.98
CLN6-207ENST00000566347 CETN1Q12798 172 aa21.17■□□□□ 0.98
CLN6-207ENST00000566347 EFEMP1Q12805 493 aa21.17■□□□□ 0.98
CLN6-207ENST00000566347 CCDC40Q4G0X9 1142 aa21.17■□□□□ 0.98
CLN6-207ENST00000566347 ISM2Q6H9L7 571 aa21.17■□□□□ 0.98
CLN6-207ENST00000566347 RSRC2Q7L4I2 434 aaKnown RBP21.17■□□□□ 0.98
CLN6-207ENST00000566347 HMGB4Q8WW32 186 aa21.17■□□□□ 0.98
CLN6-207ENST00000566347 ZDHHC4Q9NPG8 344 aa21.17■□□□□ 0.98
CLN6-207ENST00000566347 STRIP2Q9ULQ0 834 aa21.17■□□□□ 0.98
CLN6-207ENST00000566347 NUP205Q92621 2012 aa21.16■□□□□ 0.98
CLN6-207ENST00000566347 TCRBV21S2A2A0A5A6 115 aa21.16■□□□□ 0.98
CLN6-207ENST00000566347 BICDL2A1A5D9 508 aa21.16■□□□□ 0.98
CLN6-207ENST00000566347 TRIM24O15164 1050 aa21.16■□□□□ 0.98
CLN6-207ENST00000566347 ZBED1O96006 694 aa21.16■□□□□ 0.98
CLN6-207ENST00000566347 VDRP11473 427 aa21.16■□□□□ 0.98
CLN6-207ENST00000566347 CD19P15391 556 aa21.16■□□□□ 0.98
CLN6-207ENST00000566347 CD44P16070 742 aaKnown RBP21.16■□□□□ 0.98
CLN6-207ENST00000566347 NTSR1P30989 418 aa21.16■□□□□ 0.98
CLN6-207ENST00000566347 CHKAP35790 457 aa21.16■□□□□ 0.98
CLN6-207ENST00000566347 P2RY2P41231 377 aa21.16■□□□□ 0.98
CLN6-207ENST00000566347 BST2Q10589 180 aaKnown RBP21.16■□□□□ 0.98
CLN6-207ENST00000566347 PM20D1Q6GTS8 502 aa21.16■□□□□ 0.98
CLN6-207ENST00000566347 SDE2Q6IQ49 451 aa21.16■□□□□ 0.98
CLN6-207ENST00000566347 PGBD3Q8N328 593 aa21.16■□□□□ 0.98
CLN6-207ENST00000566347 SMOC1Q9H4F8 434 aa21.16■□□□□ 0.98
CLN6-207ENST00000566347 LRRC4Q9HBW1 653 aa21.16■□□□□ 0.98
CLN6-207ENST00000566347 MARCH2Q9P0N8 246 aa21.16■□□□□ 0.98
CLN6-207ENST00000566347 KLKB1P03952 638 aa21.15■□□□□ 0.98
CLN6-207ENST00000566347 HOXB2P14652 356 aa21.15■□□□□ 0.98
CLN6-207ENST00000566347 BCKDHBP21953 392 aa21.15■□□□□ 0.98
CLN6-207ENST00000566347 CORO1AP31146 461 aaKnown RBP21.15■□□□□ 0.98
CLN6-207ENST00000566347 DGKGP49619 791 aa21.15■□□□□ 0.98
CLN6-207ENST00000566347 PDE4CQ08493 712 aa21.15■□□□□ 0.98
CLN6-207ENST00000566347 LRMPQ12912 555 aa21.15■□□□□ 0.98
CLN6-207ENST00000566347 PPM1JQ5JR12 505 aa21.15■□□□□ 0.98
CLN6-207ENST00000566347 KLHL10Q6JEL2 608 aa21.15■□□□□ 0.98
CLN6-207ENST00000566347 TTI2Q6NXR4 508 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms