RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 ARHGAP18Q8N392 663 aa20.9■□□□□ 0.94
CLN6-206ENST00000565471 POLMQ9NP87 494 aaPredicted RBP20.9■□□□□ 0.94
CLN6-206ENST00000565471 NUDT5Q9UKK9 219 aa20.9■□□□□ 0.94
CLN6-206ENST00000565471 DCLK1O15075 740 aa20.89■□□□□ 0.93
CLN6-206ENST00000565471 PMM2O15305 246 aa20.89■□□□□ 0.93
CLN6-206ENST00000565471 HNRNPLP14866 589 aaKnown RBP eCLIP20.89■□□□□ 0.93
CLN6-206ENST00000565471 TBXAS1P24557 533 aaPredicted RBP20.89■□□□□ 0.93
CLN6-206ENST00000565471 MPLP40238 635 aa20.89■□□□□ 0.93
CLN6-206ENST00000565471 LIMK1P53667 647 aa20.89■□□□□ 0.93
CLN6-206ENST00000565471 GRAMD4Q6IC98 578 aa20.89■□□□□ 0.93
CLN6-206ENST00000565471 C12orf50Q8NA57 414 aaPredicted RBP20.89■□□□□ 0.93
CLN6-206ENST00000565471 XPO6Q96QU8 1125 aaKnown RBP20.89■□□□□ 0.93
CLN6-206ENST00000565471 BBS2Q9BXC9 721 aa20.89■□□□□ 0.93
CLN6-206ENST00000565471 TPSD1Q9BZJ3 242 aa20.89■□□□□ 0.93
CLN6-206ENST00000565471 NEDD8-MDP1E9PL57 170 aa20.88■□□□□ 0.93
CLN6-206ENST00000565471 ADAM23O75077 832 aa20.88■□□□□ 0.93
CLN6-206ENST00000565471 STC2O76061 302 aa20.88■□□□□ 0.93
CLN6-206ENST00000565471 TYRP14679 529 aa20.88■□□□□ 0.93
CLN6-206ENST00000565471 CD44P16070 742 aaKnown RBP20.88■□□□□ 0.93
CLN6-206ENST00000565471 FMO5P49326 533 aa20.88■□□□□ 0.93
CLN6-206ENST00000565471 BCAT1P54687 386 aa20.88■□□□□ 0.93
CLN6-206ENST00000565471 COG7P83436 770 aa20.88■□□□□ 0.93
CLN6-206ENST00000565471 AASDHQ4L235 1098 aaPredicted RBP20.88■□□□□ 0.93
CLN6-206ENST00000565471 SGO2Q562F6 1265 aa20.88■□□□□ 0.93
CLN6-206ENST00000565471 C10orf76Q5T2E6 689 aa20.88■□□□□ 0.93
CLN6-206ENST00000565471 PMS2CLQ68D20 193 aa20.88■□□□□ 0.93
CLN6-206ENST00000565471 TTC30AQ86WT1 665 aa20.88■□□□□ 0.93
CLN6-206ENST00000565471 UBR7Q8N806 425 aa20.88■□□□□ 0.93
CLN6-206ENST00000565471 ZNF513Q8N8E2 541 aaPredicted RBP20.88■□□□□ 0.93
CLN6-206ENST00000565471 OLIG1Q8TAK6 271 aa20.88■□□□□ 0.93
CLN6-206ENST00000565471 VPS45Q9NRW7 570 aa20.88■□□□□ 0.93
CLN6-206ENST00000565471 DNAJC17Q9NVM6 304 aaKnown RBP20.88■□□□□ 0.93
CLN6-206ENST00000565471 TSPAN16Q9UKR8 245 aa20.88■□□□□ 0.93
CLN6-206ENST00000565471 ZNF510Q9Y2H8 683 aa20.88■□□□□ 0.93
CLN6-206ENST00000565471 STARD13Q9Y3M8 1113 aa20.88■□□□□ 0.93
CLN6-206ENST00000565471 SDK1Q7Z5N4 2213 aa20.88■□□□□ 0.93
CLN6-206ENST00000565471 DCDC2BA2VCK2 349 aa20.87■□□□□ 0.93
CLN6-206ENST00000565471 XPO1O14980 1071 aaKnown RBP20.87■□□□□ 0.93
CLN6-206ENST00000565471 GDF9O60383 454 aa20.87■□□□□ 0.93
CLN6-206ENST00000565471 GBP1P32455 592 aa20.87■□□□□ 0.93
CLN6-206ENST00000565471 SF3A2Q15428 464 aaKnown RBP20.87■□□□□ 0.93
CLN6-206ENST00000565471 CCDC6Q16204 474 aa20.87■□□□□ 0.93
CLN6-206ENST00000565471 GOLGA7BQ2TAP0 167 aa20.87■□□□□ 0.93
CLN6-206ENST00000565471 PM20D1Q6GTS8 502 aa20.87■□□□□ 0.93
CLN6-206ENST00000565471 ISM2Q6H9L7 571 aa20.87■□□□□ 0.93
CLN6-206ENST00000565471 TTI2Q6NXR4 508 aa20.87■□□□□ 0.93
CLN6-206ENST00000565471 TPGS1Q6ZTW0 290 aa20.87■□□□□ 0.93
CLN6-206ENST00000565471 MIB1Q86YT6 1006 aa20.87■□□□□ 0.93
CLN6-206ENST00000565471 HESX1Q9UBX0 185 aa20.87■□□□□ 0.93
CLN6-206ENST00000565471 KIAA1257Q9ULG3 409 aa20.87■□□□□ 0.93
CLN6-206ENST00000565471 BICDL2A1A5D9 508 aa20.86■□□□□ 0.93
CLN6-206ENST00000565471 TRIM24O15164 1050 aa20.86■□□□□ 0.93
CLN6-206ENST00000565471 VDRP11473 427 aa20.86■□□□□ 0.93
CLN6-206ENST00000565471 BMP6P22004 513 aa20.86■□□□□ 0.93
CLN6-206ENST00000565471 TKTL1P51854 596 aa20.86■□□□□ 0.93
CLN6-206ENST00000565471 YWHAGP61981 247 aaKnown RBP eCLIP20.86■□□□□ 0.93
CLN6-206ENST00000565471 PDE4CQ08493 712 aa20.86■□□□□ 0.93
CLN6-206ENST00000565471 BST2Q10589 180 aaKnown RBP20.86■□□□□ 0.93
CLN6-206ENST00000565471 MORC3Q14149 939 aa20.86■□□□□ 0.93
CLN6-206ENST00000565471 CCDC40Q4G0X9 1142 aa20.86■□□□□ 0.93
CLN6-206ENST00000565471 DCLK3Q9C098 648 aa20.86■□□□□ 0.93
CLN6-206ENST00000565471 ZDHHC4Q9NPG8 344 aa20.86■□□□□ 0.93
CLN6-206ENST00000565471 RASAL2Q9UJF2 1139 aa20.86■□□□□ 0.93
CLN6-206ENST00000565471 INVSQ9Y283 1065 aa20.86■□□□□ 0.93
CLN6-206ENST00000565471 BCLAF3A2AJT9 711 aaKnown RBP20.85■□□□□ 0.93
CLN6-206ENST00000565471 PPP1R3GB7ZBB8 358 aa20.85■□□□□ 0.93
CLN6-206ENST00000565471 P4HA2O15460 535 aa20.85■□□□□ 0.93
CLN6-206ENST00000565471 ZBED1O96006 694 aa20.85■□□□□ 0.93
CLN6-206ENST00000565471 KLKB1P03952 638 aa20.85■□□□□ 0.93
CLN6-206ENST00000565471 CD19P15391 556 aa20.85■□□□□ 0.93
CLN6-206ENST00000565471 CHKAP35790 457 aa20.85■□□□□ 0.93
CLN6-206ENST00000565471 CREB5Q02930 508 aa20.85■□□□□ 0.93
CLN6-206ENST00000565471 CETN1Q12798 172 aa20.85■□□□□ 0.93
CLN6-206ENST00000565471 EFEMP1Q12805 493 aa20.85■□□□□ 0.93
CLN6-206ENST00000565471 LRMPQ12912 555 aa20.85■□□□□ 0.93
CLN6-206ENST00000565471 KLHL10Q6JEL2 608 aa20.85■□□□□ 0.93
CLN6-206ENST00000565471 NELFBQ8WX92 580 aa20.85■□□□□ 0.93
CLN6-206ENST00000565471 NT5C1BQ96P26 610 aa20.85■□□□□ 0.93
CLN6-206ENST00000565471 MARCH2Q9P0N8 246 aa20.85■□□□□ 0.93
CLN6-206ENST00000565471 BCCIPQ9P287 314 aaKnown RBP eCLIP20.85■□□□□ 0.93
CLN6-206ENST00000565471 HCN2Q9UL51 889 aa20.85■□□□□ 0.93
CLN6-206ENST00000565471 STRIP2Q9ULQ0 834 aa20.85■□□□□ 0.93
CLN6-206ENST00000565471 MYO18AQ92614 2054 aaKnown RBP20.85■□□□□ 0.93
CLN6-206ENST00000565471 TCRBV21S2A2A0A5A6 115 aa20.84■□□□□ 0.93
CLN6-206ENST00000565471 TULP2O00295 520 aa20.84■□□□□ 0.93
CLN6-206ENST00000565471 O00370 1275 aa20.84■□□□□ 0.93
CLN6-206ENST00000565471 PAEPP09466 180 aa20.84■□□□□ 0.93
CLN6-206ENST00000565471 SETSIPP0DME0 302 aa20.84■□□□□ 0.93
CLN6-206ENST00000565471 BCKDHBP21953 392 aa20.84■□□□□ 0.93
CLN6-206ENST00000565471 NTSR1P30989 418 aa20.84■□□□□ 0.93
CLN6-206ENST00000565471 P2RY2P41231 377 aa20.84■□□□□ 0.93
CLN6-206ENST00000565471 DGKGP49619 791 aa20.84■□□□□ 0.93
CLN6-206ENST00000565471 BYSLQ13895 437 aaKnown RBP20.84■□□□□ 0.93
CLN6-206ENST00000565471 RSRC2Q7L4I2 434 aaKnown RBP20.84■□□□□ 0.93
CLN6-206ENST00000565471 HMGB4Q8WW32 186 aa20.84■□□□□ 0.93
CLN6-206ENST00000565471 KCTD13Q8WZ19 329 aa20.84■□□□□ 0.93
CLN6-206ENST00000565471 DDX1Q92499 740 aaKnown RBP20.84■□□□□ 0.93
CLN6-206ENST00000565471 SPACA7Q96KW9 195 aa20.84■□□□□ 0.93
CLN6-206ENST00000565471 ULBP1Q9BZM6 244 aa20.84■□□□□ 0.93
CLN6-206ENST00000565471 LRRC4Q9HBW1 653 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms