RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 SLC5A3P53794 718 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 AIF1P55008 147 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 CA9Q16790 459 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 ANKRD20A8PQ5CZ79 823 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 ZDHHC24Q6UX98 284 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 ALLCQ8N6M5 410 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 CCDC185Q8N715 623 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 SLC7A14Q8TBB6 771 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 TRIM43Q96BQ3 446 aaPredicted RBP20.36■□□□□ 0.85
CLN6-205ENST00000564846 C8orf48Q96LL4 319 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 TTPALQ9BTX7 342 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 DHX35Q9H5Z1 703 aaKnown RBP20.36■□□□□ 0.85
CLN6-205ENST00000564846 FNDC1Q4ZHG4 1894 aaPredicted RBP20.36■□□□□ 0.85
CLN6-205ENST00000564846 PTPRDP23468 1912 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 F9P00740 461 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 RAG1P15918 1043 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 PBX3P40426 434 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 PLTPP55058 493 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 PITX1P78337 314 aaPredicted RBP20.36■□□□□ 0.85
CLN6-205ENST00000564846 BSPRYQ5W0U4 402 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 MFSD5Q6N075 450 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 TMEM173Q86WV6 379 aaPredicted RBP20.36■□□□□ 0.85
CLN6-205ENST00000564846 FAM131BQ86XD5 332 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 SCN4BQ8IWT1 228 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 TMEM199Q8N511 208 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 ART4Q93070 314 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 SNF8Q96H20 258 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 CWH43Q9H720 699 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 MTRF1LQ9UGC7 380 aaKnown RBP20.36■□□□□ 0.85
CLN6-205ENST00000564846 FZD10Q9ULW2 581 aa20.36■□□□□ 0.85
CLN6-205ENST00000564846 SPDYE4A6NLX3 237 aa20.35■□□□□ 0.85
CLN6-205ENST00000564846 APOL1O14791 398 aa20.35■□□□□ 0.85
CLN6-205ENST00000564846 TBC1D4O60343 1298 aa20.35■□□□□ 0.85
CLN6-205ENST00000564846 KRT14P02533 472 aa20.35■□□□□ 0.85
CLN6-205ENST00000564846 ATF2P15336 505 aa20.35■□□□□ 0.85
CLN6-205ENST00000564846 CSF2RAP15509 400 aa20.35■□□□□ 0.85
CLN6-205ENST00000564846 TGM2P21980 687 aa20.35■□□□□ 0.85
CLN6-205ENST00000564846 ITGB8P26012 769 aa20.35■□□□□ 0.85
CLN6-205ENST00000564846 NME3Q13232 169 aa20.35■□□□□ 0.85
CLN6-205ENST00000564846 PPP6R3Q5H9R7 873 aaPredicted RBP20.35■□□□□ 0.85
CLN6-205ENST00000564846 RTP2Q5QGT7 225 aa20.35■□□□□ 0.85
CLN6-205ENST00000564846 ALS2CLQ60I27 953 aa20.35■□□□□ 0.85
CLN6-205ENST00000564846 SLC9A4Q6AI14 798 aa20.35■□□□□ 0.85
CLN6-205ENST00000564846 BBOF1Q8ND07 529 aa20.35■□□□□ 0.85
CLN6-205ENST00000564846 FBXO25Q8TCJ0 367 aa20.35■□□□□ 0.85
CLN6-205ENST00000564846 P3H4Q92791 437 aa20.35■□□□□ 0.85
CLN6-205ENST00000564846 B3GALT6Q96L58 329 aa20.35■□□□□ 0.85
CLN6-205ENST00000564846 RCOR3Q9P2K3 495 aaPredicted RBP20.35■□□□□ 0.85
CLN6-205ENST00000564846 SAE1Q9UBE0 346 aaPredicted RBP20.35■□□□□ 0.85
CLN6-205ENST00000564846 MCF2LO15068 1137 aa20.34■□□□□ 0.85
CLN6-205ENST00000564846 ZFXP17010 805 aaPredicted RBP20.34■□□□□ 0.85
CLN6-205ENST00000564846 IVDP26440 423 aa20.34■□□□□ 0.85
CLN6-205ENST00000564846 KLRC2P26717 231 aa20.34■□□□□ 0.85
CLN6-205ENST00000564846 ADCY8P40145 1251 aa20.34■□□□□ 0.85
CLN6-205ENST00000564846 CAV1Q03135 178 aa20.34■□□□□ 0.85
CLN6-205ENST00000564846 GPR17Q13304 367 aa20.34■□□□□ 0.85
CLN6-205ENST00000564846 TSEN2Q8NCE0 465 aaKnown RBP20.34■□□□□ 0.85
CLN6-205ENST00000564846 PCDH19Q8TAB3 1148 aa20.34■□□□□ 0.85
CLN6-205ENST00000564846 SCAMP5Q8TAC9 235 aa20.34■□□□□ 0.85
CLN6-205ENST00000564846 BCL7CQ8WUZ0 217 aaPredicted RBP20.34■□□□□ 0.85
CLN6-205ENST00000564846 NTAN1Q96AB6 310 aa20.34■□□□□ 0.85
CLN6-205ENST00000564846 ZNF689Q96CS4 500 aaPredicted RBP20.34■□□□□ 0.85
CLN6-205ENST00000564846 PRDM16Q9HAZ2 1276 aa20.34■□□□□ 0.85
CLN6-205ENST00000564846 PIGVQ9NUD9 493 aa20.34■□□□□ 0.85
CLN6-205ENST00000564846 MTMR10Q9NXD2 777 aa20.34■□□□□ 0.85
CLN6-205ENST00000564846 VWA8A3KMH1 1905 aa20.34■□□□□ 0.85
CLN6-205ENST00000564846 GOLGA6BA6NDN3 693 aa20.34■□□□□ 0.85
CLN6-205ENST00000564846 EFEMP2O95967 443 aa20.34■□□□□ 0.85
CLN6-205ENST00000564846 CPB1P15086 417 aa20.34■□□□□ 0.85
CLN6-205ENST00000564846 NOMO1Q15155 1222 aa20.34■□□□□ 0.85
CLN6-205ENST00000564846 TRIP13Q15645 432 aaPredicted RBP20.34■□□□□ 0.85
CLN6-205ENST00000564846 NUP93Q8N1F7 819 aa20.34■□□□□ 0.85
CLN6-205ENST00000564846 PQLC3Q8N755 202 aa20.34■□□□□ 0.85
CLN6-205ENST00000564846 SPPL2BQ8TCT7 592 aa20.34■□□□□ 0.85
CLN6-205ENST00000564846 KCTD15Q96SI1 283 aaPredicted RBP20.34■□□□□ 0.85
CLN6-205ENST00000564846 ABCC13Q9NSE7 274 aa20.34■□□□□ 0.85
CLN6-205ENST00000564846 PATJQ8NI35 1801 aa20.33■□□□□ 0.84
CLN6-205ENST00000564846 COL4A4P53420 1690 aaPredicted RBP20.33■□□□□ 0.84
CLN6-205ENST00000564846 SYNJ2BP-COX16A0A087WUM0 186 aa20.33■□□□□ 0.84
CLN6-205ENST00000564846 HSPA1AP0DMV8 641 aaKnown RBP20.33■□□□□ 0.84
CLN6-205ENST00000564846 HSPA1BP0DMV9 641 aaKnown RBP20.33■□□□□ 0.84
CLN6-205ENST00000564846 PECAM1P16284 738 aaPredicted RBP20.33■□□□□ 0.84
CLN6-205ENST00000564846 ARL4AP40617 200 aa20.33■□□□□ 0.84
CLN6-205ENST00000564846 EIF3EP60228 445 aaKnown RBP20.33■□□□□ 0.84
CLN6-205ENST00000564846 YWHAGP61981 247 aaKnown RBP eCLIP20.33■□□□□ 0.84
CLN6-205ENST00000564846 USP41Q3LFD5 358 aa20.33■□□□□ 0.84
CLN6-205ENST00000564846 EFHC2Q5JST6 749 aa20.33■□□□□ 0.84
CLN6-205ENST00000564846 TMC3Q7Z5M5 1100 aa20.33■□□□□ 0.84
CLN6-205ENST00000564846 PLD5Q8N7P1 536 aa20.33■□□□□ 0.84
CLN6-205ENST00000564846 C2orf15Q8WU43 125 aaKnown RBP20.33■□□□□ 0.84
CLN6-205ENST00000564846 EDEM1Q92611 657 aa20.33■□□□□ 0.84
CLN6-205ENST00000564846 IGSF21Q96ID5 467 aa20.33■□□□□ 0.84
CLN6-205ENST00000564846 PGLYRP2Q96PD5 576 aa20.33■□□□□ 0.84
CLN6-205ENST00000564846 TMEM121Q9BTD3 319 aa20.33■□□□□ 0.84
CLN6-205ENST00000564846 FBXO44Q9H4M3 255 aa20.33■□□□□ 0.84
CLN6-205ENST00000564846 WDR6Q9NNW5 1121 aaKnown RBP20.33■□□□□ 0.84
CLN6-205ENST00000564846 DDIT4Q9NX09 232 aa20.33■□□□□ 0.84
CLN6-205ENST00000564846 COX16Q9P0S2 106 aa20.33■□□□□ 0.84
CLN6-205ENST00000564846 LTBP2Q14767 1821 aa20.32■□□□□ 0.84
CLN6-205ENST00000564846 CARNS1A5YM72 827 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms