RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 TCEAL3Q969E4 200 aa17.6■□□□□ 0.41
CCNF-203ENST00000564236 SPACA7Q96KW9 195 aa17.6■□□□□ 0.41
CCNF-203ENST00000564236 CNTNAP3BQ96NU0 1288 aa17.6■□□□□ 0.41
CCNF-203ENST00000564236 GABRG3Q99928 467 aa17.6■□□□□ 0.41
CCNF-203ENST00000564236 CNTNAP3Q9BZ76 1288 aa17.6■□□□□ 0.41
CCNF-203ENST00000564236 ZNF510Q9Y2H8 683 aa17.6■□□□□ 0.41
CCNF-203ENST00000564236 LAMA1P25391 3075 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 A0A1W2PQF6 199 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 TRIM24O15164 1050 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 PENKP01210 267 aaPredicted RBP17.59■□□□□ 0.41
CCNF-203ENST00000564236 CISD3P0C7P0 127 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 RALAP11233 206 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 PMLP29590 882 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 NTSR1P30989 418 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 HOXD12P35452 270 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 DPP6P42658 865 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 COG7P83436 770 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 SHC2P98077 582 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 FKBP3Q00688 224 aaKnown RBP17.59■□□□□ 0.41
CCNF-203ENST00000564236 LRRC63Q05C16 580 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 PNOCQ13519 176 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 CBWD6Q4V339 395 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 CBWD3Q5JTY5 395 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 CBWD5Q5RIA9 395 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 C10orf120Q5SQS8 335 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 RNF43Q68DV7 783 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 PM20D1Q6GTS8 502 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 CYP2U1Q7Z449 544 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 MIB1Q86YT6 1006 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 ELOA2Q8IYF1 753 aaPredicted RBP17.59■□□□□ 0.41
CCNF-203ENST00000564236 ARHGAP18Q8N392 663 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 ANKRD52Q8NB46 1076 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 HEXIM2Q96MH2 286 aaKnown RBP17.59■□□□□ 0.41
CCNF-203ENST00000564236 TIGD1Q96MW7 591 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 EDEM2Q9BV94 578 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 BBS2Q9BXC9 721 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 MMRN2Q9H8L6 949 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 DNAJC17Q9NVM6 304 aaKnown RBP17.59■□□□□ 0.41
CCNF-203ENST00000564236 MBD1Q9UIS9 605 aaPredicted RBP17.59■□□□□ 0.41
CCNF-203ENST00000564236 NAGPAQ9UK23 515 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 INVSQ9Y283 1065 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 SLC27A6Q9Y2P4 619 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 RALGAPA1Q6GYQ0 2036 aa17.59■□□□□ 0.41
CCNF-203ENST00000564236 TCRBV21S2A2A0A5A6 115 aa17.58■□□□□ 0.4
CCNF-203ENST00000564236 NEDD8-MDP1E9PL57 170 aa17.58■□□□□ 0.4
CCNF-203ENST00000564236 GFRA2O00451 464 aa17.58■□□□□ 0.4
CCNF-203ENST00000564236 KHNYNO15037 678 aaKnown RBP17.58■□□□□ 0.4
CCNF-203ENST00000564236 PMM2O15305 246 aa17.58■□□□□ 0.4
CCNF-203ENST00000564236 KLKB1P03952 638 aa17.58■□□□□ 0.4
CCNF-203ENST00000564236 GABRG2P18507 467 aa17.58■□□□□ 0.4
CCNF-203ENST00000564236 ZNF394Q53GI3 561 aa17.58■□□□□ 0.4
CCNF-203ENST00000564236 LPCAT2Q7L5N7 544 aa17.58■□□□□ 0.4
CCNF-203ENST00000564236 PIGZQ86VD9 579 aa17.58■□□□□ 0.4
CCNF-203ENST00000564236 TATDN2Q93075 761 aa17.58■□□□□ 0.4
CCNF-203ENST00000564236 SLC35C1Q96A29 364 aa17.58■□□□□ 0.4
CCNF-203ENST00000564236 JAKMIP2Q96AA8 810 aa17.58■□□□□ 0.4
CCNF-203ENST00000564236 EEF2KMTQ96G04 330 aa17.58■□□□□ 0.4
CCNF-203ENST00000564236 P2RY11Q96G91 374 aa17.58■□□□□ 0.4
CCNF-203ENST00000564236 ARID3AQ99856 593 aa17.58■□□□□ 0.4
CCNF-203ENST00000564236 ACACBO00763 2458 aa17.57■□□□□ 0.4
CCNF-203ENST00000564236 PRRT4C9JH25 899 aa17.57■□□□□ 0.4
CCNF-203ENST00000564236 CDX4O14627 284 aaPredicted RBP17.57■□□□□ 0.4
CCNF-203ENST00000564236 MDM4O15151 490 aa17.57■□□□□ 0.4
CCNF-203ENST00000564236 CHKAP35790 457 aa17.57■□□□□ 0.4
CCNF-203ENST00000564236 PMS1P54277 932 aaKnown RBP17.57■□□□□ 0.4
CCNF-203ENST00000564236 EGFLAMQ63HQ2 1017 aa17.57■□□□□ 0.4
CCNF-203ENST00000564236 ANKRD40Q6AI12 368 aa17.57■□□□□ 0.4
CCNF-203ENST00000564236 FOXR2Q6PJQ5 311 aa17.57■□□□□ 0.4
CCNF-203ENST00000564236 TPGS1Q6ZTW0 290 aa17.57■□□□□ 0.4
CCNF-203ENST00000564236 BHLHA9Q7RTU4 235 aa17.57■□□□□ 0.4
CCNF-203ENST00000564236 TTC30AQ86WT1 665 aa17.57■□□□□ 0.4
CCNF-203ENST00000564236 SYT12Q8IV01 421 aa17.57■□□□□ 0.4
CCNF-203ENST00000564236 FAM217AQ8IXS0 508 aa17.57■□□□□ 0.4
CCNF-203ENST00000564236 UBR7Q8N806 425 aa17.57■□□□□ 0.4
CCNF-203ENST00000564236 HMGB4Q8WW32 186 aa17.57■□□□□ 0.4
CCNF-203ENST00000564236 RLN3Q8WXF3 142 aa17.57■□□□□ 0.4
CCNF-203ENST00000564236 TSG101Q99816 390 aa17.57■□□□□ 0.4
CCNF-203ENST00000564236 DCLK3Q9C098 648 aa17.57■□□□□ 0.4
CCNF-203ENST00000564236 ZDHHC4Q9NPG8 344 aa17.57■□□□□ 0.4
CCNF-203ENST00000564236 NUDT5Q9UKK9 219 aa17.57■□□□□ 0.4
CCNF-203ENST00000564236 SDK1Q7Z5N4 2213 aa17.57■□□□□ 0.4
CCNF-203ENST00000564236 PLXND1Q9Y4D7 1925 aa17.57■□□□□ 0.4
CCNF-203ENST00000564236 EPG5Q9HCE0 2579 aa17.56■□□□□ 0.4
CCNF-203ENST00000564236 NPC1O15118 1278 aa17.56■□□□□ 0.4
CCNF-203ENST00000564236 KCNK5O95279 499 aa17.56■□□□□ 0.4
CCNF-203ENST00000564236 SMC2O95347 1197 aa17.56■□□□□ 0.4
CCNF-203ENST00000564236 HOXB2P14652 356 aa17.56■□□□□ 0.4
CCNF-203ENST00000564236 DGKGP49619 791 aa17.56■□□□□ 0.4
CCNF-203ENST00000564236 ZNF132P52740 706 aa17.56■□□□□ 0.4
CCNF-203ENST00000564236 CUL2Q13617 745 aa17.56■□□□□ 0.4
CCNF-203ENST00000564236 ENPP2Q13822 863 aa17.56■□□□□ 0.4
CCNF-203ENST00000564236 N4BP2L1Q5TBK1 243 aaPredicted RBP17.56■□□□□ 0.4
CCNF-203ENST00000564236 FYB2Q5VWT5 728 aa17.56■□□□□ 0.4
CCNF-203ENST00000564236 SLC36A4Q6YBV0 504 aa17.56■□□□□ 0.4
CCNF-203ENST00000564236 TOGARAM2Q6ZUX3 1019 aa17.56■□□□□ 0.4
CCNF-203ENST00000564236 SCML4Q8N228 414 aa17.56■□□□□ 0.4
CCNF-203ENST00000564236 CPXM2Q8N436 756 aa17.56■□□□□ 0.4
CCNF-203ENST00000564236 BCCIPQ9P287 314 aaKnown RBP eCLIP17.56■□□□□ 0.4
CCNF-203ENST00000564236 C4orf47A7E2U8 309 aa17.55■□□□□ 0.4
CCNF-203ENST00000564236 XPO1O14980 1071 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms