RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-208ENST00000563492 USP25Q9UHP3 1055 aa7.28□□□□□ -1.24
CDH11-208ENST00000563492 NAGPAQ9UK23 515 aa7.28□□□□□ -1.24
CDH11-208ENST00000563492 GREB1Q4ZG55 1949 aa7.28□□□□□ -1.24
CDH11-208ENST00000563492 MYOFQ9NZM1 2061 aa7.28□□□□□ -1.24
CDH11-208ENST00000563492 KMT2BQ9UMN6 2715 aaPredicted RBP7.27□□□□□ -1.25
CDH11-208ENST00000563492 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.27□□□□□ -1.25
CDH11-208ENST00000563492 CACNG3O60359 315 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 STC2O76061 302 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 ALDH1A2O94788 518 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 CALCAP01258 141 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 HOXB2P14652 356 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 NDUFV2P19404 249 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 NTSR1P30989 418 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 PSMC2P35998 433 aaKnown RBP7.27□□□□□ -1.25
CDH11-208ENST00000563492 NOVA1P51513 510 aaKnown RBP7.27□□□□□ -1.25
CDH11-208ENST00000563492 KRT85P78386 507 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 EFEMP1Q12805 493 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 LRMPQ12912 555 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 ST3GAL2Q16842 350 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 CBWD6Q4V339 395 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 TRIM61Q5EBN2 209 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 CBWD3Q5JTY5 395 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 CBWD5Q5RIA9 395 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 SH3PXD2AQ5TCZ1 1133 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 ISM2Q6H9L7 571 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 GRAMD4Q6IC98 578 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 INTS8Q75QN2 995 aaKnown RBP7.27□□□□□ -1.25
CDH11-208ENST00000563492 LPCAT2Q7L5N7 544 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 PIGZQ86VD9 579 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 SLC41A1Q8IVJ1 513 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 CHPFQ8IZ52 775 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 GUF1Q8N442 669 aaKnown RBP7.27□□□□□ -1.25
CDH11-208ENST00000563492 SLC4A11Q8NBS3 891 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 DEFB124Q8NES8 71 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 CCDC26Q8TAB7 109 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 OTUB2Q96DC9 234 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 DUSP16Q9BY84 665 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 FBXO44Q9H4M3 255 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 CYP3A43Q9HB55 503 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 POLMQ9NP87 494 aaPredicted RBP7.27□□□□□ -1.25
CDH11-208ENST00000563492 CISHQ9NSE2 258 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 ANGPTL2Q9UKU9 493 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 CYP8B1Q9UNU6 501 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 USP3Q9Y6I4 520 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 ZNF638Q14966 1978 aaKnown RBP7.27□□□□□ -1.25
CDH11-208ENST00000563492 FRYQ5TBA9 3013 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 USP24Q9UPU5 2620 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 PTPRDP23468 1912 aa7.27□□□□□ -1.25
CDH11-208ENST00000563492 EML5Q05BV3 1969 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 ZFHX4Q86UP3 3567 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 CACNA1EQ15878 2313 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 IGHV1OR15-9A0A0B4J2B8 117 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 A0A1W2PQ27 194 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 A0A1W2PQ64 194 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 A0A1W2PQD8 194 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 TRIM49BA6NDI0 452 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 C1QTNF9BB2RNN3 333 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 MAPK13O15264 365 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 GABBR2O75899 941 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 CFIP05156 583 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 MYL1P05976 194 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 C1QTNF9P0C862 333 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 KRT13P13646 458 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 ENGP17813 658 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 MAOBP27338 520 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 PRCPP42785 496 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 PLA2G4AP47712 749 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 MCCD1P59942 119 aaPredicted RBP7.26□□□□□ -1.25
CDH11-208ENST00000563492 FAM193AP78312 1265 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 RPL6Q02878 288 aaKnown RBP7.26□□□□□ -1.25
CDH11-208ENST00000563492 FOXC1Q12948 553 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 NFIL3Q16649 462 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 GEN1Q17RS7 908 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 KRT39Q6A163 491 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 ANKRD40Q6AI12 368 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 BHLHA9Q7RTU4 235 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 CCDC186Q7Z3E2 898 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 SYT12Q8IV01 421 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 DENND1CQ8IV53 801 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 UBA3Q8TBC4 463 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 IPO4Q8TEX9 1081 aaKnown RBP7.26□□□□□ -1.25
CDH11-208ENST00000563492 SORCS1Q8WY21 1168 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 DDX1Q92499 740 aaKnown RBP7.26□□□□□ -1.25
CDH11-208ENST00000563492 DUSP9Q99956 384 aaKnown RBP7.26□□□□□ -1.25
CDH11-208ENST00000563492 IMPG2Q9BZV3 1241 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 TMEM8AQ9HCN3 771 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 TMEM9BQ9NQ34 198 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 RAB20Q9NX57 234 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 MARK1Q9P0L2 795 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 RASAL2Q9UJF2 1139 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 DNMT3LQ9UJW3 386 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 PILRBQ9UKJ0 227 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 AGO1Q9UL18 857 aaKnown RBP7.26□□□□□ -1.25
CDH11-208ENST00000563492 WASF3Q9UPY6 502 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 STARD13Q9Y3M8 1113 aa7.26□□□□□ -1.25
CDH11-208ENST00000563492 SPAG17Q6Q759 2223 aa7.25□□□□□ -1.25
CDH11-208ENST00000563492 RALGAPA1Q6GYQ0 2036 aa7.25□□□□□ -1.25
CDH11-208ENST00000563492 SPAARA0A1B0GVQ0 90 aa7.25□□□□□ -1.25
CDH11-208ENST00000563492 SLC12A8A0AV02 714 aa7.25□□□□□ -1.25
CDH11-208ENST00000563492 PIK3R2O00459 728 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms