RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 DDX20Q9UHI6 824 aaKnown RBP19.88■□□□□ 0.77
SMPD3-203ENST00000563226 INPP5FQ9Y2H2 1132 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 MFHAS1Q9Y4C4 1052 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 SYNJ2BP-COX16A0A087WUM0 186 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 A0A087WUV0 522 aaPredicted RBP19.88■□□□□ 0.77
SMPD3-203ENST00000563226 KCNN4O15554 427 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 AP1G2O75843 785 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 RPL9P32969 192 aaKnown RBP19.88■□□□□ 0.77
SMPD3-203ENST00000563226 TKTL1P51854 596 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 ACLYP53396 1101 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 GBE1Q04446 702 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 STAT4Q14765 748 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 MAP3K21Q5TCX8 1036 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 SIX6OS1Q8N1H7 587 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 XPO6Q96QU8 1125 aaKnown RBP19.88■□□□□ 0.77
SMPD3-203ENST00000563226 ULBP1Q9BZM6 244 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 UBN1Q9NPG3 1134 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 COX16Q9P0S2 106 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 SRRDQ9UH36 339 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 LGALS13Q9UHV8 139 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 NAALADL1Q9UQQ1 740 aa19.88■□□□□ 0.77
SMPD3-203ENST00000563226 CLUHO75153 1309 aa19.87■□□□□ 0.77
SMPD3-203ENST00000563226 SRRM3A6NNA2 597 aaPredicted RBP19.87■□□□□ 0.77
SMPD3-203ENST00000563226 NDC80O14777 642 aa19.87■□□□□ 0.77
SMPD3-203ENST00000563226 STIP1P31948 543 aaKnown RBP19.87■□□□□ 0.77
SMPD3-203ENST00000563226 RAB27AP51159 221 aa19.87■□□□□ 0.77
SMPD3-203ENST00000563226 GPX6P59796 221 aa19.87■□□□□ 0.77
SMPD3-203ENST00000563226 YWHAZP63104 245 aaKnown RBP19.87■□□□□ 0.77
SMPD3-203ENST00000563226 SLC10A2Q12908 348 aaPredicted RBP19.87■□□□□ 0.77
SMPD3-203ENST00000563226 TTC25Q96NG3 672 aa19.87■□□□□ 0.77
SMPD3-203ENST00000563226 CSPG4P5Q96PW8 444 aa19.87■□□□□ 0.77
SMPD3-203ENST00000563226 VPS37BQ9H9H4 285 aa19.87■□□□□ 0.77
SMPD3-203ENST00000563226 ETNK2Q9NVF9 386 aa19.87■□□□□ 0.77
SMPD3-203ENST00000563226 XPO7Q9UIA9 1087 aaKnown RBP19.87■□□□□ 0.77
SMPD3-203ENST00000563226 FRMPD3Q5JV73 1810 aa19.87■□□□□ 0.77
SMPD3-203ENST00000563226 GMNCA6NCL1 334 aa19.87■□□□□ 0.77
SMPD3-203ENST00000563226 F8W810 466 aa19.87■□□□□ 0.77
SMPD3-203ENST00000563226 FYNP06241 537 aa19.87■□□□□ 0.77
SMPD3-203ENST00000563226 CAPNS2Q96L46 248 aa19.87■□□□□ 0.77
SMPD3-203ENST00000563226 FZD10Q9ULW2 581 aa19.87■□□□□ 0.77
SMPD3-203ENST00000563226 USP3Q9Y6I4 520 aa19.87■□□□□ 0.77
SMPD3-203ENST00000563226 EXOC1LA0A1B0GW35 172 aa19.86■□□□□ 0.77
SMPD3-203ENST00000563226 ZNF487B1APH4 448 aa19.86■□□□□ 0.77
SMPD3-203ENST00000563226 B3GAT3O94766 335 aa19.86■□□□□ 0.77
SMPD3-203ENST00000563226 FAM107AO95990 144 aa19.86■□□□□ 0.77
SMPD3-203ENST00000563226 GOT1P17174 413 aa19.86■□□□□ 0.77
SMPD3-203ENST00000563226 ARL4CP56559 192 aa19.86■□□□□ 0.77
SMPD3-203ENST00000563226 FAM26DQ5JW98 314 aa19.86■□□□□ 0.77
SMPD3-203ENST00000563226 VSTM1Q6UX27 236 aa19.86■□□□□ 0.77
SMPD3-203ENST00000563226 TAOK1Q7L7X3 1001 aa19.86■□□□□ 0.77
SMPD3-203ENST00000563226 BNIPLQ7Z465 357 aa19.86■□□□□ 0.77
SMPD3-203ENST00000563226 NT5C3BQ969T7 300 aa19.86■□□□□ 0.77
SMPD3-203ENST00000563226 CENPTQ96BT3 561 aa19.86■□□□□ 0.77
SMPD3-203ENST00000563226 SLC2A13Q96QE2 648 aa19.86■□□□□ 0.77
SMPD3-203ENST00000563226 NPY6RQ99463 290 aa19.86■□□□□ 0.77
SMPD3-203ENST00000563226 CDH9Q9ULB4 789 aa19.86■□□□□ 0.77
SMPD3-203ENST00000563226 YJEFN3A6XGL0 299 aa19.85■□□□□ 0.77
SMPD3-203ENST00000563226 E7ENQ6 273 aa19.85■□□□□ 0.77
SMPD3-203ENST00000563226 CDH16O75309 829 aa19.85■□□□□ 0.77
SMPD3-203ENST00000563226 ZBED1O96006 694 aa19.85■□□□□ 0.77
SMPD3-203ENST00000563226 ITGB1P05556 798 aa19.85■□□□□ 0.77
SMPD3-203ENST00000563226 AMPD1P23109 780 aa19.85■□□□□ 0.77
SMPD3-203ENST00000563226 NOS2P35228 1153 aa19.85■□□□□ 0.77
SMPD3-203ENST00000563226 KCNJ11Q14654 390 aa19.85■□□□□ 0.77
SMPD3-203ENST00000563226 QPCTQ16769 361 aa19.85■□□□□ 0.77
SMPD3-203ENST00000563226 FAXCQ5TGI0 409 aa19.85■□□□□ 0.77
SMPD3-203ENST00000563226 RNF180Q86T96 592 aa19.85■□□□□ 0.77
SMPD3-203ENST00000563226 RTP4Q96DX8 246 aa19.85■□□□□ 0.77
SMPD3-203ENST00000563226 CCDC77Q9BR77 488 aa19.85■□□□□ 0.77
SMPD3-203ENST00000563226 TRPV6Q9H1D0 765 aa19.85■□□□□ 0.77
SMPD3-203ENST00000563226 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.85■□□□□ 0.77
SMPD3-203ENST00000563226 BCLAF3A2AJT9 711 aaKnown RBP19.85■□□□□ 0.77
SMPD3-203ENST00000563226 HHLA1C9JL84 531 aa19.85■□□□□ 0.77
SMPD3-203ENST00000563226 E7ESA3 106 aa19.85■□□□□ 0.77
SMPD3-203ENST00000563226 M0QYT0 321 aa19.85■□□□□ 0.77
SMPD3-203ENST00000563226 DAOAP59103 153 aa19.85■□□□□ 0.77
SMPD3-203ENST00000563226 TMED2Q15363 201 aa19.85■□□□□ 0.77
SMPD3-203ENST00000563226 NCBP2-AS2Q69YL0 99 aa19.85■□□□□ 0.77
SMPD3-203ENST00000563226 MYLPFQ96A32 169 aa19.85■□□□□ 0.77
SMPD3-203ENST00000563226 INTS9Q9NV88 658 aaKnown RBP19.85■□□□□ 0.77
SMPD3-203ENST00000563226 ZMYND8Q9ULU4 1186 aaPredicted RBP19.85■□□□□ 0.77
SMPD3-203ENST00000563226 POC1B-GALNT4F8VUJ3 575 aa19.84■□□□□ 0.77
SMPD3-203ENST00000563226 TRPA1O75762 1119 aa19.84■□□□□ 0.77
SMPD3-203ENST00000563226 CAPN15O75808 1086 aa19.84■□□□□ 0.77
SMPD3-203ENST00000563226 ODC1P11926 461 aa19.84■□□□□ 0.77
SMPD3-203ENST00000563226 SSTR1P30872 391 aa19.84■□□□□ 0.77
SMPD3-203ENST00000563226 GRIK3Q13003 919 aa19.84■□□□□ 0.77
SMPD3-203ENST00000563226 NME3Q13232 169 aa19.84■□□□□ 0.77
SMPD3-203ENST00000563226 BBS9Q3SYG4 887 aa19.84■□□□□ 0.77
SMPD3-203ENST00000563226 ZNF598Q86UK7 904 aaKnown RBP19.84■□□□□ 0.77
SMPD3-203ENST00000563226 ECHDC2Q86YB7 292 aa19.84■□□□□ 0.77
SMPD3-203ENST00000563226 FBXO36Q8NEA4 188 aa19.84■□□□□ 0.77
SMPD3-203ENST00000563226 CCDC110Q8TBZ0 833 aa19.84■□□□□ 0.77
SMPD3-203ENST00000563226 ADAM32Q8TC27 787 aa19.84■□□□□ 0.77
SMPD3-203ENST00000563226 TMEM209Q96SK2 561 aa19.84■□□□□ 0.77
SMPD3-203ENST00000563226 POPDC2Q9HBU9 364 aa19.84■□□□□ 0.77
SMPD3-203ENST00000563226 RAB6BQ9NRW1 208 aa19.84■□□□□ 0.77
SMPD3-203ENST00000563226 PIGVQ9NUD9 493 aa19.84■□□□□ 0.77
SMPD3-203ENST00000563226 TMLHEQ9NVH6 421 aa19.84■□□□□ 0.77
SMPD3-203ENST00000563226 TMEM120BA0PK00 339 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms