RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	STAU1	O95793	577 aa	Known RBP	8.82	□□□□□ -1
CKLF-208	ENST00000563092	CER1	O95813	267 aa		8.82	□□□□□ -1
CKLF-208	ENST00000563092	KRT18	P05783	430 aa	Known RBP	8.82	□□□□□ -1
CKLF-208	ENST00000563092	KRT19	P08727	400 aa		8.82	□□□□□ -1
CKLF-208	ENST00000563092	PDGFRB	P09619	1106 aa		8.82	□□□□□ -1
CKLF-208	ENST00000563092	TMEM191B	P0C7N4	346 aa		8.82	□□□□□ -1
CKLF-208	ENST00000563092	GAP43	P17677	238 aa		8.82	□□□□□ -1
CKLF-208	ENST00000563092	PTPN1	P18031	435 aa	Known RBP	8.82	□□□□□ -1
CKLF-208	ENST00000563092	ACO1	P21399	889 aa	Known RBP	8.82	□□□□□ -1
CKLF-208	ENST00000563092	GNL1	P36915	607 aa	Predicted RBP	8.82	□□□□□ -1
CKLF-208	ENST00000563092	PGF	P49763	221 aa		8.82	□□□□□ -1
CKLF-208	ENST00000563092	ALCAM	Q13740	583 aa		8.82	□□□□□ -1
CKLF-208	ENST00000563092	HLA-B	Q31612	363 aa		8.82	□□□□□ -1
CKLF-208	ENST00000563092	SDE2	Q6IQ49	451 aa		8.82	□□□□□ -1
CKLF-208	ENST00000563092	PAQR9	Q6ZVX9	377 aa		8.82	□□□□□ -1
CKLF-208	ENST00000563092	MARCH9	Q86YJ5	346 aa		8.82	□□□□□ -1
CKLF-208	ENST00000563092	RGL4	Q8IZJ4	473 aa		8.82	□□□□□ -1
CKLF-208	ENST00000563092	KRI1	Q8N9T8	703 aa	Known RBP	8.82	□□□□□ -1
CKLF-208	ENST00000563092	RBBP8NL	Q8NC74	664 aa	Predicted RBP	8.82	□□□□□ -1
CKLF-208	ENST00000563092	TOE1	Q96GM8	510 aa	Known RBP	8.82	□□□□□ -1
CKLF-208	ENST00000563092	KLF16	Q9BXK1	252 aa	Predicted RBP	8.82	□□□□□ -1
CKLF-208	ENST00000563092	B3GNT5	Q9BYG0	378 aa		8.82	□□□□□ -1
CKLF-208	ENST00000563092	FGFBP2	Q9BYJ0	223 aa		8.82	□□□□□ -1
CKLF-208	ENST00000563092	MKRN2	Q9H000	416 aa	Known RBP	8.82	□□□□□ -1
CKLF-208	ENST00000563092	PCED1A	Q9H1Q7	454 aa		8.82	□□□□□ -1
CKLF-208	ENST00000563092	PRORY	Q9H606	182 aa		8.82	□□□□□ -1
CKLF-208	ENST00000563092	GAREM1	Q9H706	876 aa		8.82	□□□□□ -1
CKLF-208	ENST00000563092	CCSER2	Q9H7U1	834 aa		8.82	□□□□□ -1
CKLF-208	ENST00000563092	OSGEP	Q9NPF4	335 aa		8.82	□□□□□ -1
CKLF-208	ENST00000563092	DNAJC17	Q9NVM6	304 aa	Known RBP	8.82	□□□□□ -1
CKLF-208	ENST00000563092	COMMD8	Q9NX08	183 aa		8.82	□□□□□ -1
CKLF-208	ENST00000563092	BTBD3	Q9Y2F9	522 aa		8.82	□□□□□ -1
CKLF-208	ENST00000563092	SLC27A6	Q9Y2P4	619 aa		8.82	□□□□□ -1
CKLF-208	ENST00000563092	RAD54B	Q9Y620	910 aa		8.82	□□□□□ -1
CKLF-208	ENST00000563092	ASXL3	Q9C0F0	2248 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	GOLGA8IP	A6NC78	632 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	GOLGA8J	A6NMD2	632 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	WASH3P	C4AMC7	463 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	NPC1	O15118	1278 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	BCAT2	O15382	392 aa	Predicted RBP	8.81	□□□□□ -1
CKLF-208	ENST00000563092	ZBTB24	O43167	697 aa	Predicted RBP	8.81	□□□□□ -1
CKLF-208	ENST00000563092	PCDHGA12	O60330	932 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	ABL1	P00519	1130 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	CST3	P01034	146 aa	Predicted RBP	8.81	□□□□□ -1
CKLF-208	ENST00000563092	PRB1	P04280	392 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	NCAM1	P13591	858 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	PLA2G2A	P14555	144 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	TYR	P14679	529 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	MATK	P42679	507 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	TPMT	P51580	245 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	DUOXA2	Q1HG44	320 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	ANO4	Q32M45	955 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	FUT11	Q495W5	492 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	TRAPPC11	Q7Z392	1133 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	WDR49	Q8IV35	697 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	GPD1L	Q8N335	351 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	ZCCHC9	Q8N567	271 aa	Known RBP	8.81	□□□□□ -1
CKLF-208	ENST00000563092	B3GALNT2	Q8NCR0	500 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	SCAMP5	Q8TAC9	235 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	SETD7	Q8WTS6	366 aa	Known RBP	8.81	□□□□□ -1
CKLF-208	ENST00000563092	FBXO32	Q969P5	355 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	ANKRD36BP1	Q96IX9	119 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	KCNK16	Q96T55	309 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	TRIM9	Q9C026	710 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	GZF1	Q9H116	711 aa	Predicted RBP	8.81	□□□□□ -1
CKLF-208	ENST00000563092	XYLT2	Q9H1B5	865 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	DPEP3	Q9H4B8	488 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	MRPL44	Q9H9J2	332 aa	Known RBP	8.81	□□□□□ -1
CKLF-208	ENST00000563092	CYLD	Q9NQC7	956 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	WDR35	Q9P2L0	1181 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	STK17A	Q9UEE5	414 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	CHORDC1	Q9UHD1	332 aa	Predicted RBP	8.81	□□□□□ -1
CKLF-208	ENST00000563092	SH3BP1	Q9Y3L3	701 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	STON1	Q9Y6Q2	735 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	ATM	Q13315	3056 aa		8.81	□□□□□ -1
CKLF-208	ENST00000563092	EIF4E1B	A6NMX2	242 aa	Known RBP	8.8	□□□□□ -1
CKLF-208	ENST00000563092	CLDN5	O00501	218 aa		8.8	□□□□□ -1
CKLF-208	ENST00000563092	TNFSF14	O43557	240 aa		8.8	□□□□□ -1
CKLF-208	ENST00000563092	BMP15	O95972	392 aa		8.8	□□□□□ -1
CKLF-208	ENST00000563092	PENK	P01210	267 aa	Predicted RBP	8.8	□□□□□ -1
CKLF-208	ENST00000563092	OXTR	P30559	389 aa		8.8	□□□□□ -1
CKLF-208	ENST00000563092	HOXD13	P35453	343 aa		8.8	□□□□□ -1
CKLF-208	ENST00000563092	EIF2S3	P41091	472 aa	Known RBP	8.8	□□□□□ -1
CKLF-208	ENST00000563092	COPA	P53621	1224 aa		8.8	□□□□□ -1
CKLF-208	ENST00000563092	SLC5A3	P53794	718 aa		8.8	□□□□□ -1
CKLF-208	ENST00000563092	SURF1	Q15526	300 aa		8.8	□□□□□ -1
CKLF-208	ENST00000563092	DCAF12L1	Q5VU92	463 aa		8.8	□□□□□ -1
CKLF-208	ENST00000563092	KLHDC10	Q6PID8	442 aa		8.8	□□□□□ -1
CKLF-208	ENST00000563092	USP49	Q70CQ1	688 aa		8.8	□□□□□ -1
CKLF-208	ENST00000563092	HS2ST1	Q7LGA3	356 aa		8.8	□□□□□ -1
CKLF-208	ENST00000563092	DYM	Q7RTS9	669 aa		8.8	□□□□□ -1
CKLF-208	ENST00000563092	CBWD2	Q8IUF1	395 aa		8.8	□□□□□ -1
CKLF-208	ENST00000563092	ZMIZ2	Q8NF64	920 aa		8.8	□□□□□ -1
CKLF-208	ENST00000563092	RHBDD1	Q8TEB9	315 aa		8.8	□□□□□ -1
CKLF-208	ENST00000563092	XPO6	Q96QU8	1125 aa	Known RBP	8.8	□□□□□ -1
CKLF-208	ENST00000563092	GPR174	Q9BXC1	333 aa		8.8	□□□□□ -1
CKLF-208	ENST00000563092	BBS2	Q9BXC9	721 aa		8.8	□□□□□ -1
CKLF-208	ENST00000563092	VRTN	Q9H8Y1	702 aa		8.8	□□□□□ -1
CKLF-208	ENST00000563092	PRDM16	Q9HAZ2	1276 aa		8.8	□□□□□ -1
CKLF-208	ENST00000563092	CSNK1G1	Q9HCP0	422 aa		8.8	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms