RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 IRF7Q92985 503 aa17.11■□□□□ 0.33
USB1-206ENST00000562534 LRRC3BQ96PB8 259 aa17.11■□□□□ 0.33
USB1-206ENST00000562534 GKN1Q9NS71 199 aa17.11■□□□□ 0.33
USB1-206ENST00000562534 TMEM51Q9NW97 253 aa17.11■□□□□ 0.33
USB1-206ENST00000562534 SMPD4Q9NXE4 827 aa17.11■□□□□ 0.33
USB1-206ENST00000562534 ANAPC1Q9H1A4 1944 aa17.1■□□□□ 0.33
USB1-206ENST00000562534 E2F8A0AVK6 867 aa17.1■□□□□ 0.33
USB1-206ENST00000562534 GOLGA6L6A8MZA4 724 aa17.1■□□□□ 0.33
USB1-206ENST00000562534 SLC9A3R1O14745 358 aaPredicted RBP17.1■□□□□ 0.33
USB1-206ENST00000562534 PLEKP08567 350 aaPredicted RBP17.1■□□□□ 0.33
USB1-206ENST00000562534 SRFP11831 508 aa17.1■□□□□ 0.33
USB1-206ENST00000562534 ALADP13716 330 aa17.1■□□□□ 0.33
USB1-206ENST00000562534 NOS2P35228 1153 aa17.1■□□□□ 0.33
USB1-206ENST00000562534 EIF4A3P38919 411 aaKnown RBP17.1■□□□□ 0.33
USB1-206ENST00000562534 ZXDBP98169 803 aa17.1■□□□□ 0.33
USB1-206ENST00000562534 PTP4A2Q12974 167 aa17.1■□□□□ 0.33
USB1-206ENST00000562534 MAPK8IP2Q13387 824 aaPredicted RBP17.1■□□□□ 0.33
USB1-206ENST00000562534 TAF5Q15542 800 aa17.1■□□□□ 0.33
USB1-206ENST00000562534 DCAF6Q58WW2 860 aa17.1■□□□□ 0.33
USB1-206ENST00000562534 MSANTD2Q6P1R3 559 aa17.1■□□□□ 0.33
USB1-206ENST00000562534 MIB1Q86YT6 1006 aa17.1■□□□□ 0.33
USB1-206ENST00000562534 MCOLN2Q8IZK6 566 aa17.1■□□□□ 0.33
USB1-206ENST00000562534 TC2NQ8N9U0 490 aa17.1■□□□□ 0.33
USB1-206ENST00000562534 KHSRPQ92945 711 aaKnown RBP eCLIP17.1■□□□□ 0.33
USB1-206ENST00000562534 RSPRY1Q96DX4 576 aa17.1■□□□□ 0.33
USB1-206ENST00000562534 CCDC42Q96M95 316 aa17.1■□□□□ 0.33
USB1-206ENST00000562534 PANX2Q96RD6 677 aa17.1■□□□□ 0.33
USB1-206ENST00000562534 C11orf70Q9BRQ4 267 aa17.1■□□□□ 0.33
USB1-206ENST00000562534 ISCUQ9H1K1 167 aa17.1■□□□□ 0.33
USB1-206ENST00000562534 DEF6Q9H4E7 631 aa17.1■□□□□ 0.33
USB1-206ENST00000562534 TRPV5Q9NQA5 729 aa17.1■□□□□ 0.33
USB1-206ENST00000562534 RRN3Q9NYV6 651 aa17.1■□□□□ 0.33
USB1-206ENST00000562534 TBC1D14Q9P2M4 693 aa17.1■□□□□ 0.33
USB1-206ENST00000562534 RASAL2Q9UJF2 1139 aa17.1■□□□□ 0.33
USB1-206ENST00000562534 NAALADL1Q9UQQ1 740 aa17.1■□□□□ 0.33
USB1-206ENST00000562534 SH3BP1Q9Y3L3 701 aa17.1■□□□□ 0.33
USB1-206ENST00000562534 HBS1LQ9Y450 684 aaKnown RBP17.1■□□□□ 0.33
USB1-206ENST00000562534 SLC12A8A0AV02 714 aa17.09■□□□□ 0.33
USB1-206ENST00000562534 TMCO5BA8MYB1 307 aa17.09■□□□□ 0.33
USB1-206ENST00000562534 GDI1P31150 447 aa17.09■□□□□ 0.33
USB1-206ENST00000562534 GBP1P32455 592 aa17.09■□□□□ 0.33
USB1-206ENST00000562534 MATKP42679 507 aa17.09■□□□□ 0.33
USB1-206ENST00000562534 GSCP56915 257 aaPredicted RBP17.09■□□□□ 0.33
USB1-206ENST00000562534 RNASE9P60153 205 aaKnown RBP17.09■□□□□ 0.33
USB1-206ENST00000562534 GPC5P78333 572 aa17.09■□□□□ 0.33
USB1-206ENST00000562534 PFKPQ01813 784 aa17.09■□□□□ 0.33
USB1-206ENST00000562534 MTF1Q14872 753 aa17.09■□□□□ 0.33
USB1-206ENST00000562534 ZNF77Q15935 545 aa17.09■□□□□ 0.33
USB1-206ENST00000562534 C2CD6Q53TS8 623 aa17.09■□□□□ 0.33
USB1-206ENST00000562534 FAM102AQ5T9C2 384 aaPredicted RBP17.09■□□□□ 0.33
USB1-206ENST00000562534 SYPL2Q5VXT5 272 aa17.09■□□□□ 0.33
USB1-206ENST00000562534 HTR3DQ70Z44 454 aa17.09■□□□□ 0.33
USB1-206ENST00000562534 MON1BQ7L1V2 547 aa17.09■□□□□ 0.33
USB1-206ENST00000562534 DEFB106AQ8N104 65 aa17.09■□□□□ 0.33
USB1-206ENST00000562534 TTC16Q8NEE8 873 aa17.09■□□□□ 0.33
USB1-206ENST00000562534 OLIG1Q8TAK6 271 aa17.09■□□□□ 0.33
USB1-206ENST00000562534 TRIM11Q96F44 468 aa17.09■□□□□ 0.33
USB1-206ENST00000562534 ZFRQ96KR1 1074 aaKnown RBP17.09■□□□□ 0.33
USB1-206ENST00000562534 SLC2A13Q96QE2 648 aa17.09■□□□□ 0.33
USB1-206ENST00000562534 DCLK3Q9C098 648 aa17.09■□□□□ 0.33
USB1-206ENST00000562534 BRD9Q9H8M2 597 aa17.09■□□□□ 0.33
USB1-206ENST00000562534 SLC2A4RGQ9NR83 387 aa17.09■□□□□ 0.33
USB1-206ENST00000562534 TAS2R14Q9NYV8 317 aa17.09■□□□□ 0.33
USB1-206ENST00000562534 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.09■□□□□ 0.33
USB1-206ENST00000562534 CFAP97Q9P2B7 532 aa17.09■□□□□ 0.33
USB1-206ENST00000562534 SFMBT1Q9UHJ3 866 aa17.09■□□□□ 0.33
USB1-206ENST00000562534 LSM7Q9UK45 103 aaKnown RBP17.09■□□□□ 0.33
USB1-206ENST00000562534 DUSP12Q9UNI6 340 aa17.09■□□□□ 0.33
USB1-206ENST00000562534 ZNF510Q9Y2H8 683 aa17.09■□□□□ 0.33
USB1-206ENST00000562534 MYO10Q9HD67 2058 aa17.09■□□□□ 0.33
USB1-206ENST00000562534 OBSL1O75147 1896 aa17.08■□□□□ 0.33
USB1-206ENST00000562534 A0A087X0T9 212 aa17.08■□□□□ 0.32
USB1-206ENST00000562534 SIGLEC16A6NMB1 481 aa17.08■□□□□ 0.32
USB1-206ENST00000562534 GOLGA8SH3BPF8 625 aa17.08■□□□□ 0.32
USB1-206ENST00000562534 MDM4O15151 490 aa17.08■□□□□ 0.32
USB1-206ENST00000562534 AKR1B10O60218 316 aa17.08■□□□□ 0.32
USB1-206ENST00000562534 GRAP2O75791 330 aa17.08■□□□□ 0.32
USB1-206ENST00000562534 FAM228BP0C875 321 aa17.08■□□□□ 0.32
USB1-206ENST00000562534 MYBL1P10243 752 aa17.08■□□□□ 0.32
USB1-206ENST00000562534 KRT3P12035 628 aa17.08■□□□□ 0.32
USB1-206ENST00000562534 USP4Q13107 963 aa17.08■□□□□ 0.32
USB1-206ENST00000562534 GRM2Q14416 872 aa17.08■□□□□ 0.32
USB1-206ENST00000562534 PDGFRLQ15198 375 aa17.08■□□□□ 0.32
USB1-206ENST00000562534 SLC18A3Q16572 532 aa17.08■□□□□ 0.32
USB1-206ENST00000562534 CCDC122Q5T0U0 273 aa17.08■□□□□ 0.32
USB1-206ENST00000562534 ALKBH5Q6P6C2 394 aaKnown RBP17.08■□□□□ 0.32
USB1-206ENST00000562534 C3orf20Q8ND61 904 aa17.08■□□□□ 0.32
USB1-206ENST00000562534 OSCP1Q8WVF1 389 aa17.08■□□□□ 0.32
USB1-206ENST00000562534 OTUB2Q96DC9 234 aa17.08■□□□□ 0.32
USB1-206ENST00000562534 PIWIL1Q96J94 861 aaKnown RBP17.08■□□□□ 0.32
USB1-206ENST00000562534 SERPINB11Q96P15 392 aa17.08■□□□□ 0.32
USB1-206ENST00000562534 CHP1Q99653 195 aa17.08■□□□□ 0.32
USB1-206ENST00000562534 FAM83CQ9BQN1 747 aa17.08■□□□□ 0.32
USB1-206ENST00000562534 NHEJ1Q9H9Q4 299 aaPredicted RBP17.08■□□□□ 0.32
USB1-206ENST00000562534 DUS2Q9NX74 493 aaKnown RBP17.08■□□□□ 0.32
USB1-206ENST00000562534 MUTYHQ9UIF7 546 aa17.08■□□□□ 0.32
USB1-206ENST00000562534 TMEM59LQ9UK28 342 aa17.08■□□□□ 0.32
USB1-206ENST00000562534 STAP1Q9ULZ2 295 aa17.08■□□□□ 0.32
USB1-206ENST00000562534 C5orf42Q9H799 3197 aa17.08■□□□□ 0.32
USB1-206ENST00000562534 FAM170AA1A519 330 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms