RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 CASP8AP2Q9UKL3 1982 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 PCNTO95613 3336 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 ARL5CA6NH57 179 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 GPR182O15218 404 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 VIMP08670 466 aaKnown RBP10.19□□□□□ -0.78
SMG1-205ENST00000561947 MAGEA9P43362 315 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 LHX1P48742 406 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 CLCNKBP51801 687 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 AFF1P51825 1210 aaKnown RBP10.19□□□□□ -0.78
SMG1-205ENST00000561947 GEMIN4P57678 1058 aaKnown RBP10.19□□□□□ -0.78
SMG1-205ENST00000561947 TRIM32Q13049 653 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 CBLBQ13191 982 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 XRCC4Q13426 336 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 ARHGEF18Q6ZSZ5 1173 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 PIGWQ7Z7B1 504 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 MRPL10Q7Z7H8 261 aaKnown RBP10.19□□□□□ -0.78
SMG1-205ENST00000561947 PALM2Q8IXS6 379 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 OTUD6BQ8N6M0 293 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 CKAP2Q8WWK9 683 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 CABS1Q96KC9 395 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 CSPG4P5Q96PW8 444 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 ZIC5Q96T25 663 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 SYT15Q9BQS2 421 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 NSRP1Q9H0G5 558 aaKnown RBP10.19□□□□□ -0.78
SMG1-205ENST00000561947 ACSS3Q9H6R3 686 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 LRRC4Q9HBW1 653 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 RAB6BQ9NRW1 208 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 NKIRAS1Q9NYS0 192 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 FZD10Q9ULW2 581 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 MAP3K6O95382 1288 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 FAM200BP0CF97 657 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 NR2C2P49116 596 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 GBE1Q04446 702 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 KLHL38Q2WGJ6 581 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 OTUD1Q5VV17 481 aaPredicted RBP10.19□□□□□ -0.78
SMG1-205ENST00000561947 DSTYKQ6XUX3 929 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 AGMOQ6ZNB7 445 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 C3orf62Q6ZUJ4 267 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 BNIPLQ7Z465 357 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 TAX1BP1Q86VP1 789 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 PSTKQ8IV42 348 aaKnown RBP10.19□□□□□ -0.78
SMG1-205ENST00000561947 SIX6OS1Q8N1H7 587 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 CCDC197Q8NCU1 140 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 FBF1Q8TES7 1133 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 MAGEB5Q9BZ81 275 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 AGO3Q9H9G7 860 aaKnown RBP10.19□□□□□ -0.78
SMG1-205ENST00000561947 MLXIPLQ9NP71 852 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 XPNPEP3Q9NQH7 507 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 KRT82Q9NSB4 513 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 SENP1Q9P0U3 644 aa10.19□□□□□ -0.78
SMG1-205ENST00000561947 ZNF638Q14966 1978 aaKnown RBP10.18□□□□□ -0.78
SMG1-205ENST00000561947 TDRD15B5MCY1 1934 aaKnown RBP10.18□□□□□ -0.78
SMG1-205ENST00000561947 FAM47DPA6NHR8 397 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 TOMM70O94826 608 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 KRT15P19012 456 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 RPL9P32969 192 aaKnown RBP10.18□□□□□ -0.78
SMG1-205ENST00000561947 NOS2P35228 1153 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 MAGEA6P43360 314 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 SCNN1GP51170 649 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 YWHAZP63104 245 aaKnown RBP10.18□□□□□ -0.78
SMG1-205ENST00000561947 CACNB2Q08289 660 aaPredicted RBP10.18□□□□□ -0.78
SMG1-205ENST00000561947 SLC10A2Q12908 348 aaPredicted RBP10.18□□□□□ -0.78
SMG1-205ENST00000561947 EFTUD2Q15029 972 aaKnown RBP eCLIP10.18□□□□□ -0.78
SMG1-205ENST00000561947 PKN2Q16513 984 aaKnown RBP10.18□□□□□ -0.78
SMG1-205ENST00000561947 DCAF6Q58WW2 860 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 SLC45A4Q5BKX6 768 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 C4orf22Q6V702 233 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 FAM131BQ86XD5 332 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 C3orf58Q8NDZ4 430 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 NT5C3BQ969T7 300 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 QKIQ96PU8 341 aaKnown RBP eCLIP10.18□□□□□ -0.78
SMG1-205ENST00000561947 SLC2A13Q96QE2 648 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 NPY6RQ99463 290 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 DHRS4Q9BTZ2 278 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 FRMD8Q9BZ67 464 aaPredicted RBP10.18□□□□□ -0.78
SMG1-205ENST00000561947 KLC2Q9H0B6 622 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 TRABDQ9H4I3 376 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 RCOR3Q9P2K3 495 aaPredicted RBP10.18□□□□□ -0.78
SMG1-205ENST00000561947 CHMP2BQ9UQN3 213 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 USP3Q9Y6I4 520 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 PRPF4O43172 522 aaKnown RBP eCLIP10.18□□□□□ -0.782e-7■■■□□ 16.3
SMG1-205ENST00000561947 ASGR1P07306 291 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 ATP2A2P16615 1042 aaKnown RBP10.18□□□□□ -0.78
SMG1-205ENST00000561947 THPOP40225 353 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 ARL4AP40617 200 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 ELK3P41970 407 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 NDUFV1P49821 464 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 TKTL1P51854 596 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 MAP3K7CLP57077 242 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 PRKCZQ05513 592 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 MTM1Q13496 603 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 RNF187Q5TA31 235 aaPredicted RBP10.18□□□□□ -0.78
SMG1-205ENST00000561947 NCBP2-AS2Q69YL0 99 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 FAM35AQ86V20 835 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 GDAP1Q8TB36 358 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 SGSM3Q96HU1 749 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 PRDM16Q9HAZ2 1276 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 ETNK2Q9NVF9 386 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 SAMD15Q9P1V8 674 aa10.18□□□□□ -0.78
SMG1-205ENST00000561947 STAP1Q9ULZ2 295 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms