RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 PMM2O15305 246 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 GDF9O60383 454 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 ADAM23O75077 832 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 STC2O76061 302 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 KLKB1P03952 638 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 RALAP11233 206 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 TYRP14679 529 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 PPP1R2P41236 205 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 SLC8A3P57103 927 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 GOLGA7BQ2TAP0 167 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 CCDC40Q4G0X9 1142 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 HSF5Q4G112 596 aaPredicted RBP10.81□□□□□ -0.68
CLK3-205ENST00000561673 PREPLQ4J6C6 727 aaPredicted RBP10.81□□□□□ -0.68
CLK3-205ENST00000561673 SGO2Q562F6 1265 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 ANO7Q6IWH7 933 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 Q6ZNB5 142 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 TADA2BQ86TJ2 420 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 RASSF3Q86WH2 238 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 MIB1Q86YT6 1006 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 UBR7Q8N806 425 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 NDRG1Q92597 394 aaKnown RBP10.81□□□□□ -0.68
CLK3-205ENST00000561673 CDK5RAP1Q96SZ6 601 aaKnown RBP10.81□□□□□ -0.68
CLK3-205ENST00000561673 BBS2Q9BXC9 721 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 TPSD1Q9BZJ3 242 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 DUSP15Q9H1R2 295 aaPredicted RBP10.81□□□□□ -0.68
CLK3-205ENST00000561673 WDR35Q9P2L0 1181 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 LSM7Q9UK45 103 aaKnown RBP10.81□□□□□ -0.68
CLK3-205ENST00000561673 TSPAN16Q9UKR8 245 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 HCN2Q9UL51 889 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 CTNND2Q9UQB3 1225 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 CEP250Q9BV73 2442 aa10.81□□□□□ -0.68
CLK3-205ENST00000561673 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.8□□□□□ -0.68
CLK3-205ENST00000561673 MED19A0JLT2 244 aaPredicted RBP10.8□□□□□ -0.68
CLK3-205ENST00000561673 BICDL2A1A5D9 508 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 DCDC2BA2VCK2 349 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 RNF225M0QZC1 329 aaPredicted RBP10.8□□□□□ -0.68
CLK3-205ENST00000561673 XPO1O14980 1071 aaKnown RBP10.8□□□□□ -0.68
CLK3-205ENST00000561673 CACNG3O60359 315 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 EPN2O95208 641 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 ZBED1O96006 694 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 ZNF806P0C7X5 589 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 VDRP11473 427 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 CD19P15391 556 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 TBXAS1P24557 533 aaPredicted RBP10.8□□□□□ -0.68
CLK3-205ENST00000561673 TKTL1P51854 596 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 STX17P56962 302 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 YWHAGP61981 247 aaKnown RBP eCLIP10.8□□□□□ -0.68
CLK3-205ENST00000561673 YWHAEP62258 255 aaKnown RBP10.8□□□□□ -0.68
CLK3-205ENST00000561673 COG7P83436 770 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 PDE4CQ08493 712 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 EFEMP1Q12805 493 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 SF3A2Q15428 464 aaKnown RBP10.8□□□□□ -0.68
CLK3-205ENST00000561673 USP39Q53GS9 565 aaKnown RBP10.8□□□□□ -0.68
CLK3-205ENST00000561673 EOGTQ5NDL2 527 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 PLA2G2CQ5R387 149 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 PM20D1Q6GTS8 502 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 FOXR2Q6PJQ5 311 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 BHLHA9Q7RTU4 235 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 ARHGAP18Q8N392 663 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 TERB1Q8NA31 727 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 MDGA1Q8NFP4 955 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 LMO3Q8TAP4 145 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 UBA3Q8TBC4 463 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 BHMTQ93088 406 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 P2RY11Q96G91 374 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 CNOT6LQ96LI5 555 aaKnown RBP10.8□□□□□ -0.68
CLK3-205ENST00000561673 DNAJC17Q9NVM6 304 aaKnown RBP10.8□□□□□ -0.68
CLK3-205ENST00000561673 WDR70Q9NW82 654 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 MARK1Q9P0L2 795 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 KIAA1257Q9ULG3 409 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 STARD13Q9Y3M8 1113 aa10.8□□□□□ -0.68
CLK3-205ENST00000561673 O00370 1275 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 P4HA2O15460 535 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 FOXD2O60548 495 aaPredicted RBP10.79□□□□□ -0.68
CLK3-205ENST00000561673 ALDH1A2O94788 518 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 RHOBTB1O94844 696 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 HMBSP08397 361 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 CISD3P0C7P0 127 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 CORO1AP31146 461 aaKnown RBP10.79□□□□□ -0.68
CLK3-205ENST00000561673 GBP1P32455 592 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 BCAT1P54687 386 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 BST2Q10589 180 aaKnown RBP10.79□□□□□ -0.68
CLK3-205ENST00000561673 CETN1Q12798 172 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 KCNH2Q12809 1159 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 ELF2Q15723 593 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 PKDCCQ504Y2 493 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 C10orf76Q5T2E6 689 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 GRAMD4Q6IC98 578 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 TMEM270Q6UE05 265 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 TOGARAM2Q6ZUX3 1019 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 NUDT18Q6ZVK8 323 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 RRAGAQ7L523 313 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 TRIM59Q8IWR1 403 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 PPM1KQ8N3J5 372 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 ZNF513Q8N8E2 541 aaPredicted RBP10.79□□□□□ -0.68
CLK3-205ENST00000561673 EHBP1Q8NDI1 1231 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 OLIG1Q8TAK6 271 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 NETO1Q8TDF5 533 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 TFAP2BQ92481 460 aa10.79□□□□□ -0.68
CLK3-205ENST00000561673 KAT5Q92993 513 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms