RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 MSRAQ9UJ68 235 aa10.74□□□□□ -0.69
USP3-219ENST00000561326 ASB3Q9Y575 518 aa10.74□□□□□ -0.69
USP3-219ENST00000561326 MYO7AQ13402 2215 aa10.74□□□□□ -0.69
USP3-219ENST00000561326 NUP205Q92621 2012 aa10.74□□□□□ -0.69
USP3-219ENST00000561326 UQCRHLA0A096LP55 91 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.73□□□□□ -0.69
USP3-219ENST00000561326 PI4K2BG5E9Z4 385 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 MDM4O15151 490 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 SOAT2O75908 522 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 SEC24AO95486 1093 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 VNN2O95498 520 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 C1RP00736 705 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 FYNP06241 537 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 UQCRHP07919 91 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 CNPP09543 421 aaKnown RBP10.73□□□□□ -0.69
USP3-219ENST00000561326 RARAP10276 462 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 TCF4P15884 667 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 IL1R2P27930 398 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 PTPN7P35236 360 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 GPR15P49685 360 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 TAF10Q12962 218 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 NME3Q13232 169 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 TFDP2Q14188 446 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 ATP13A4Q4VNC1 1196 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 ELMSAN1Q6PJG2 1045 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 SPOCD1Q6ZMY3 1216 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 BHLHA9Q7RTU4 235 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 MAATS1Q7Z4T9 603 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 ITIH5Q86UX2 942 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 VSIG1Q86XK7 387 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 GPR161Q8N6U8 529 aaKnown RBP10.73□□□□□ -0.69
USP3-219ENST00000561326 STKLD1Q8NE28 680 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 GPR152Q8TDT2 470 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 GIPC2Q8TF65 315 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 POF1BQ8WVV4 589 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 AUTS2Q8WXX7 1259 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 EDEM1Q92611 657 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 RNF34Q969K3 372 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 C17orf80Q9BSJ5 609 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 TTLL2Q9BWV7 592 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 AP1M1Q9BXS5 423 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 CRISPLD1Q9H336 500 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 WDCPQ9H6R7 721 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 FAM204AQ9H8W3 233 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 PRDM16Q9HAZ2 1276 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 DDIT4Q9NX09 232 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 UXTQ9UBK9 157 aaPredicted RBP10.73□□□□□ -0.69
USP3-219ENST00000561326 DPP7Q9UHL4 492 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 FBXW11Q9UKB1 542 aa10.73□□□□□ -0.69
USP3-219ENST00000561326 MAGED2Q9UNF1 606 aaPredicted RBP10.73□□□□□ -0.69
USP3-219ENST00000561326 SYNJ2BP-COX16A0A087WUM0 186 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 A0A1W2PQH9 124 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 CA3P07451 260 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 SLC2A3P11169 496 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 MCM3P25205 808 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 ADRA1BP35368 520 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 KPNA1P52294 538 aaPredicted RBP10.72□□□□□ -0.69
USP3-219ENST00000561326 ZNF135P52742 658 aaPredicted RBP10.72□□□□□ -0.69
USP3-219ENST00000561326 CDH6P55285 790 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 ERVFC1P60507 584 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 ERVK-21P61565 698 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 USP46P62068 366 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 RAB30Q15771 203 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 SMTNL2Q2TAL5 461 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 PABPC1LQ4VXU2 614 aaKnown RBP10.72□□□□□ -0.69
USP3-219ENST00000561326 EFHC2Q5JST6 749 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 KCNT1Q5JUK3 1230 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 BRMS1LQ5PSV4 323 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 MFSD7Q6UXD7 560 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 ADAT2Q7Z6V5 191 aaKnown RBP10.72□□□□□ -0.69
USP3-219ENST00000561326 SCD5Q86SK9 330 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 ELMOD1Q8N336 334 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 ZNF276Q8N554 614 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 TTC13Q8NBP0 860 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 RAPGEF5Q92565 580 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 MAGOHBQ96A72 148 aaKnown RBP10.72□□□□□ -0.69
USP3-219ENST00000561326 TRMT2BQ96GJ1 504 aaKnown RBP10.72□□□□□ -0.69
USP3-219ENST00000561326 MYRFLQ96LU7 910 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 ZNF512Q96ME7 567 aaPredicted RBP10.72□□□□□ -0.69
USP3-219ENST00000561326 KLHL5Q96PQ7 755 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 CALN1Q9BXU9 219 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 SLITRK6Q9H5Y7 841 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 RBM12Q9NTZ6 932 aaKnown RBP10.72□□□□□ -0.69
USP3-219ENST00000561326 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.72□□□□□ -0.69
USP3-219ENST00000561326 COX16Q9P0S2 106 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 SLC12A6Q9UHW9 1150 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 FZD10Q9ULW2 581 aa10.72□□□□□ -0.69
USP3-219ENST00000561326 C2orf71A6NGG8 1288 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 GRXCR1A8MXD5 290 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 ZNF487B1APH4 448 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 TGM5O43548 720 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 GLUD1P00367 558 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 LRG1P02750 347 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 RARGP13631 454 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 MYOGP15173 224 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 ZFXP17010 805 aaPredicted RBP10.71□□□□□ -0.69
USP3-219ENST00000561326 ATF6P18850 670 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 TFE3P19532 575 aaPredicted RBP10.71□□□□□ -0.69
USP3-219ENST00000561326 CCR1P32246 355 aa10.71□□□□□ -0.69
USP3-219ENST00000561326 CHRNA3P32297 505 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms