RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 KIAA1324Q6UXG2 1013 aaKnown RBP19.59■□□□□ 0.73
TPM1-226ENST00000560959 GALNT15Q8N3T1 639 aa19.59■□□□□ 0.73
TPM1-226ENST00000560959 RDH13Q8NBN7 331 aa19.59■□□□□ 0.73
TPM1-226ENST00000560959 ZNF507Q8TCN5 953 aa19.59■□□□□ 0.73
TPM1-226ENST00000560959 SETD7Q8WTS6 366 aaKnown RBP19.59■□□□□ 0.73
TPM1-226ENST00000560959 CLIC6Q96NY7 704 aa19.59■□□□□ 0.73
TPM1-226ENST00000560959 MED10Q9BTT4 135 aa19.59■□□□□ 0.73
TPM1-226ENST00000560959 GAREM1Q9H706 876 aa19.59■□□□□ 0.73
TPM1-226ENST00000560959 PRDM16Q9HAZ2 1276 aa19.59■□□□□ 0.73
TPM1-226ENST00000560959 CD93Q9NPY3 652 aa19.59■□□□□ 0.73
TPM1-226ENST00000560959 TM7SF3Q9NS93 570 aa19.59■□□□□ 0.73
TPM1-226ENST00000560959 TOR4AQ9NXH8 423 aa19.59■□□□□ 0.73
TPM1-226ENST00000560959 NXF1Q9UBU9 619 aaKnown RBP19.59■□□□□ 0.73
TPM1-226ENST00000560959 SLC27A6Q9Y2P4 619 aa19.59■□□□□ 0.73
TPM1-226ENST00000560959 RAD54BQ9Y620 910 aa19.59■□□□□ 0.73
TPM1-226ENST00000560959 GCN1Q92616 2671 aaKnown RBP19.58■□□□□ 0.73
TPM1-226ENST00000560959 EIF4E1BA6NMX2 242 aaKnown RBP19.58■□□□□ 0.72
TPM1-226ENST00000560959 BCAT2O15382 392 aaPredicted RBP19.58■□□□□ 0.72
TPM1-226ENST00000560959 FLRT2O43155 660 aa19.58■□□□□ 0.72
TPM1-226ENST00000560959 CILPO75339 1184 aa19.58■□□□□ 0.72
TPM1-226ENST00000560959 IGLV3-19P01714 112 aa19.58■□□□□ 0.72
TPM1-226ENST00000560959 FUT11Q495W5 492 aa19.58■□□□□ 0.72
TPM1-226ENST00000560959 TPGS1Q6ZTW0 290 aa19.58■□□□□ 0.72
TPM1-226ENST00000560959 SCUBE3Q8IX30 993 aa19.58■□□□□ 0.72
TPM1-226ENST00000560959 GLIS3Q8NEA6 775 aa19.58■□□□□ 0.72
TPM1-226ENST00000560959 ZNF516Q92618 1163 aa19.58■□□□□ 0.72
TPM1-226ENST00000560959 BBC3Q96PG8 261 aaPredicted RBP19.58■□□□□ 0.72
TPM1-226ENST00000560959 GPR174Q9BXC1 333 aa19.58■□□□□ 0.72
TPM1-226ENST00000560959 PCED1AQ9H1Q7 454 aa19.58■□□□□ 0.72
TPM1-226ENST00000560959 SLC6A17Q9H1V8 727 aa19.58■□□□□ 0.72
TPM1-226ENST00000560959 AGPAT3Q9NRZ7 376 aa19.58■□□□□ 0.72
TPM1-226ENST00000560959 STON1Q9Y6Q2 735 aa19.58■□□□□ 0.72
TPM1-226ENST00000560959 APC2O95996 2303 aa19.57■□□□□ 0.72
TPM1-226ENST00000560959 A0A087WV48 116 aa19.57■□□□□ 0.72
TPM1-226ENST00000560959 WASH3PC4AMC7 463 aa19.57■□□□□ 0.72
TPM1-226ENST00000560959 TGFB1I1O43294 461 aa19.57■□□□□ 0.72
TPM1-226ENST00000560959 AP1G2O75843 785 aa19.57■□□□□ 0.72
TPM1-226ENST00000560959 TBX18O95935 607 aa19.57■□□□□ 0.72
TPM1-226ENST00000560959 ACO1P21399 889 aaKnown RBP19.57■□□□□ 0.72
TPM1-226ENST00000560959 PLA2G4AP47712 749 aa19.57■□□□□ 0.72
TPM1-226ENST00000560959 SUZ12Q15022 739 aaKnown RBP19.57■□□□□ 0.72
TPM1-226ENST00000560959 HLA-BQ31612 363 aa19.57■□□□□ 0.72
TPM1-226ENST00000560959 DCAF12L1Q5VU92 463 aa19.57■□□□□ 0.72
TPM1-226ENST00000560959 ERICH6BQ5W0A0 696 aa19.57■□□□□ 0.72
TPM1-226ENST00000560959 EPM2AIP1Q7L775 607 aaPredicted RBP19.57■□□□□ 0.72
TPM1-226ENST00000560959 FUKQ8N0W3 1084 aa19.57■□□□□ 0.72
TPM1-226ENST00000560959 XXYLT1Q8NBI6 393 aa19.57■□□□□ 0.72
TPM1-226ENST00000560959 ZMIZ2Q8NF64 920 aa19.57■□□□□ 0.72
TPM1-226ENST00000560959 C1orf216Q8TAB5 229 aa19.57■□□□□ 0.72
TPM1-226ENST00000560959 CCDC127Q96BQ5 260 aa19.57■□□□□ 0.72
TPM1-226ENST00000560959 LRIG1Q96JA1 1093 aa19.57■□□□□ 0.72
TPM1-226ENST00000560959 NUP58Q9BVL2 599 aa19.57■□□□□ 0.72
TPM1-226ENST00000560959 MKRN2Q9H000 416 aaKnown RBP19.57■□□□□ 0.72
TPM1-226ENST00000560959 TNMDQ9H2S6 317 aa19.57■□□□□ 0.72
TPM1-226ENST00000560959 THAP10Q9P2Z0 257 aaPredicted RBP19.57■□□□□ 0.72
TPM1-226ENST00000560959 E9PAM4 449 aa19.56■□□□□ 0.72
TPM1-226ENST00000560959 PGFP49763 221 aa19.56■□□□□ 0.72
TPM1-226ENST00000560959 TPMTP51580 245 aa19.56■□□□□ 0.72
TPM1-226ENST00000560959 AP3M2P53677 418 aa19.56■□□□□ 0.72
TPM1-226ENST00000560959 CDH8P55286 799 aa19.56■□□□□ 0.72
TPM1-226ENST00000560959 BMT2Q1RMZ1 405 aa19.56■□□□□ 0.72
TPM1-226ENST00000560959 Q6ZNB5 142 aa19.56■□□□□ 0.72
TPM1-226ENST00000560959 CRYBG2Q8N1P7 616 aa19.56■□□□□ 0.72
TPM1-226ENST00000560959 ZNF276Q8N554 614 aa19.56■□□□□ 0.72
TPM1-226ENST00000560959 ZCCHC9Q8N567 271 aaKnown RBP19.56■□□□□ 0.72
TPM1-226ENST00000560959 RHBDD1Q8TEB9 315 aa19.56■□□□□ 0.72
TPM1-226ENST00000560959 SMOQ99835 787 aa19.56■□□□□ 0.72
TPM1-226ENST00000560959 PANK2Q9BZ23 570 aa19.56■□□□□ 0.72
TPM1-226ENST00000560959 GZF1Q9H116 711 aaPredicted RBP19.56■□□□□ 0.72
TPM1-226ENST00000560959 IL21RQ9HBE5 538 aa19.56■□□□□ 0.72
TPM1-226ENST00000560959 CGNQ9P2M7 1197 aaKnown RBP19.56■□□□□ 0.72
TPM1-226ENST00000560959 SCML2Q9UQR0 700 aa19.56■□□□□ 0.72
TPM1-226ENST00000560959 URB1O60287 2271 aaKnown RBP19.55■□□□□ 0.72
TPM1-226ENST00000560959 A0A087X0B3 334 aa19.55■□□□□ 0.72
TPM1-226ENST00000560959 BNC1Q01954 994 aa19.55■□□□□ 0.72
TPM1-226ENST00000560959 CAMK2BQ13554 666 aa19.55■□□□□ 0.72
TPM1-226ENST00000560959 CNNM4Q6P4Q7 775 aa19.55■□□□□ 0.72
TPM1-226ENST00000560959 TMPRSS6Q8IU80 811 aa19.55■□□□□ 0.72
TPM1-226ENST00000560959 C12orf56Q8IXR9 622 aa19.55■□□□□ 0.72
TPM1-226ENST00000560959 SPRYD3Q8NCJ5 442 aa19.55■□□□□ 0.72
TPM1-226ENST00000560959 UCMAQ8WVF2 138 aa19.55■□□□□ 0.72
TPM1-226ENST00000560959 SIPA1Q96FS4 1042 aa19.55■□□□□ 0.72
TPM1-226ENST00000560959 MIR1-1HGQ9H1L0 117 aa19.55■□□□□ 0.72
TPM1-226ENST00000560959 SMYD3Q9H7B4 428 aa19.55■□□□□ 0.72
TPM1-226ENST00000560959 KRT82Q9NSB4 513 aa19.55■□□□□ 0.72
TPM1-226ENST00000560959 KBTBD4Q9NVX7 518 aa19.55■□□□□ 0.72
TPM1-226ENST00000560959 FNDC3AQ9Y2H6 1198 aaKnown RBP19.55■□□□□ 0.72
TPM1-226ENST00000560959 ZNF510Q9Y2H8 683 aa19.55■□□□□ 0.72
TPM1-226ENST00000560959 TRABD2BA6NFA1 517 aa19.54■□□□□ 0.72
TPM1-226ENST00000560959 KCNJ18B7U540 433 aa19.54■□□□□ 0.72
TPM1-226ENST00000560959 SYNCRIPO60506 623 aaKnown RBP19.54■□□□□ 0.72
TPM1-226ENST00000560959 PHACTR2O75167 634 aa19.54■□□□□ 0.72
TPM1-226ENST00000560959 BEST1O76090 585 aa19.54■□□□□ 0.72
TPM1-226ENST00000560959 CD2BP2O95400 341 aaKnown RBP19.54■□□□□ 0.72
TPM1-226ENST00000560959 PENKP01210 267 aaPredicted RBP19.54■□□□□ 0.72
TPM1-226ENST00000560959 ATXN1LP0C7T5 689 aaKnown RBP19.54■□□□□ 0.72
TPM1-226ENST00000560959 C7P10643 843 aa19.54■□□□□ 0.72
TPM1-226ENST00000560959 AMPD3Q01432 767 aa19.54■□□□□ 0.72
TPM1-226ENST00000560959 ZNF667Q5HYK9 610 aa19.54■□□□□ 0.72
TPM1-226ENST00000560959 PDCD7Q8N8D1 485 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms