RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 DHCR24Q15392 516 aa16■□□□□ 0.15
SNRPA1-213ENST00000560856 TMEM196Q5HYL7 178 aa16■□□□□ 0.15
SNRPA1-213ENST00000560856 BTBD8Q5XKL5 378 aa16■□□□□ 0.15
SNRPA1-213ENST00000560856 MSANTD2Q6P1R3 559 aa16■□□□□ 0.15
SNRPA1-213ENST00000560856 TADA2BQ86TJ2 420 aa16■□□□□ 0.15
SNRPA1-213ENST00000560856 SCUBE3Q8IX30 993 aa16■□□□□ 0.15
SNRPA1-213ENST00000560856 OTUB2Q96DC9 234 aa16■□□□□ 0.15
SNRPA1-213ENST00000560856 NAP1L5Q96NT1 182 aaPredicted RBP16■□□□□ 0.15
SNRPA1-213ENST00000560856 PRRX2Q99811 253 aa16■□□□□ 0.15
SNRPA1-213ENST00000560856 LMAN1LQ9HAT1 526 aa16■□□□□ 0.15
SNRPA1-213ENST00000560856 SH3BP1Q9Y3L3 701 aa16■□□□□ 0.15
SNRPA1-213ENST00000560856 DAAM1Q9Y4D1 1078 aa16■□□□□ 0.15
SNRPA1-213ENST00000560856 E5RJQ4 531 aa15.99■□□□□ 0.15
SNRPA1-213ENST00000560856 NCAM2O15394 837 aa15.99■□□□□ 0.15
SNRPA1-213ENST00000560856 LTFP02788 710 aa15.99■□□□□ 0.15
SNRPA1-213ENST00000560856 CDH5P33151 784 aaPredicted RBP15.99■□□□□ 0.15
SNRPA1-213ENST00000560856 OPRD1P41143 372 aa15.99■□□□□ 0.15
SNRPA1-213ENST00000560856 GALK1P51570 392 aa15.99■□□□□ 0.15
SNRPA1-213ENST00000560856 PDCLQ13371 301 aa15.99■□□□□ 0.15
SNRPA1-213ENST00000560856 NFKBIBQ15653 356 aa15.99■□□□□ 0.15
SNRPA1-213ENST00000560856 FSTL4Q6MZW2 842 aa15.99■□□□□ 0.15
SNRPA1-213ENST00000560856 NOP9Q86U38 636 aaKnown RBP15.99■□□□□ 0.15
SNRPA1-213ENST00000560856 LUZP1Q86V48 1076 aa15.99■□□□□ 0.15
SNRPA1-213ENST00000560856 MIB1Q86YT6 1006 aa15.99■□□□□ 0.15
SNRPA1-213ENST00000560856 PASD1Q8IV76 773 aa15.99■□□□□ 0.15
SNRPA1-213ENST00000560856 MAML2Q8IZL2 1156 aaPredicted RBP15.99■□□□□ 0.15
SNRPA1-213ENST00000560856 EDEM1Q92611 657 aa15.99■□□□□ 0.15
SNRPA1-213ENST00000560856 EZH1Q92800 747 aaPredicted RBP15.99■□□□□ 0.15
SNRPA1-213ENST00000560856 CPXM1Q96SM3 734 aa15.99■□□□□ 0.15
SNRPA1-213ENST00000560856 MIS12Q9H081 205 aa15.99■□□□□ 0.15
SNRPA1-213ENST00000560856 CHRDQ9H2X0 955 aa15.99■□□□□ 0.15
SNRPA1-213ENST00000560856 NLRC4Q9NPP4 1024 aa15.99■□□□□ 0.15
SNRPA1-213ENST00000560856 ST7Q9NRC1 585 aa15.99■□□□□ 0.15
SNRPA1-213ENST00000560856 ABCC13Q9NSE7 274 aa15.99■□□□□ 0.15
SNRPA1-213ENST00000560856 RBM12Q9NTZ6 932 aaKnown RBP15.99■□□□□ 0.15
SNRPA1-213ENST00000560856 MARCH2Q9P0N8 246 aa15.99■□□□□ 0.15
SNRPA1-213ENST00000560856 RASAL2Q9UJF2 1139 aa15.99■□□□□ 0.15
SNRPA1-213ENST00000560856 A0A1B0GTH6 734 aa15.98■□□□□ 0.15
SNRPA1-213ENST00000560856 SOX5P35711 763 aa15.98■□□□□ 0.15
SNRPA1-213ENST00000560856 MAGEA9P43362 315 aa15.98■□□□□ 0.15
SNRPA1-213ENST00000560856 COG7P83436 770 aa15.98■□□□□ 0.15
SNRPA1-213ENST00000560856 NR1H3Q13133 447 aa15.98■□□□□ 0.15
SNRPA1-213ENST00000560856 LY6G5CQ5SRR4 150 aa15.98■□□□□ 0.15
SNRPA1-213ENST00000560856 MAMSTRQ6ZN01 415 aa15.98■□□□□ 0.15
SNRPA1-213ENST00000560856 C1orf131Q8NDD1 294 aaKnown RBP15.98■□□□□ 0.15
SNRPA1-213ENST00000560856 EPS8L1Q8TE68 723 aa15.98■□□□□ 0.15
SNRPA1-213ENST00000560856 P2RY11Q96G91 374 aa15.98■□□□□ 0.15
SNRPA1-213ENST00000560856 PIWIL1Q96J94 861 aaKnown RBP15.98■□□□□ 0.15
SNRPA1-213ENST00000560856 OLA1Q9NTK5 396 aaKnown RBP15.98■□□□□ 0.15
SNRPA1-213ENST00000560856 NOCTQ9UK39 431 aaKnown RBP15.98■□□□□ 0.15
SNRPA1-213ENST00000560856 SLC12A8A0AV02 714 aa15.97■□□□□ 0.15
SNRPA1-213ENST00000560856 GFPT2O94808 682 aa15.97■□□□□ 0.15
SNRPA1-213ENST00000560856 CAVIN2O95810 425 aa15.97■□□□□ 0.15
SNRPA1-213ENST00000560856 CHRNB2P17787 502 aa15.97■□□□□ 0.15
SNRPA1-213ENST00000560856 KRT9P35527 623 aa15.97■□□□□ 0.15
SNRPA1-213ENST00000560856 AMPD2Q01433 879 aa15.97■□□□□ 0.15
SNRPA1-213ENST00000560856 MESP2Q0VG99 397 aa15.97■□□□□ 0.15
SNRPA1-213ENST00000560856 NR1I3Q14994 352 aa15.97■□□□□ 0.15
SNRPA1-213ENST00000560856 TRIP4Q15650 581 aaPredicted RBP15.97■□□□□ 0.15
SNRPA1-213ENST00000560856 PTPN20Q4JDL3 420 aa15.97■□□□□ 0.15
SNRPA1-213ENST00000560856 DGKKQ5KSL6 1271 aa15.97■□□□□ 0.15
SNRPA1-213ENST00000560856 RSRC2Q7L4I2 434 aaKnown RBP15.97■□□□□ 0.15
SNRPA1-213ENST00000560856 BEND5Q7L4P6 421 aa15.97■□□□□ 0.15
SNRPA1-213ENST00000560856 TMEM25Q86YD3 366 aa15.97■□□□□ 0.15
SNRPA1-213ENST00000560856 FMNL3Q8IVF7 1028 aa15.97■□□□□ 0.15
SNRPA1-213ENST00000560856 C1orf210Q8IVY1 113 aa15.97■□□□□ 0.15
SNRPA1-213ENST00000560856 NEK11Q8NG66 645 aa15.97■□□□□ 0.15
SNRPA1-213ENST00000560856 PPP1R13BQ96KQ4 1090 aa15.97■□□□□ 0.15
SNRPA1-213ENST00000560856 P2RY13Q9BPV8 354 aa15.97■□□□□ 0.15
SNRPA1-213ENST00000560856 SPHK2Q9NRA0 654 aa15.97■□□□□ 0.15
SNRPA1-213ENST00000560856 SFMBT1Q9UHJ3 866 aa15.97■□□□□ 0.15
SNRPA1-213ENST00000560856 HOXC11O43248 304 aaPredicted RBP15.96■□□□□ 0.15
SNRPA1-213ENST00000560856 SART1O43290 800 aaKnown RBP15.96■□□□□ 0.15
SNRPA1-213ENST00000560856 EGFP01133 1207 aa15.96■□□□□ 0.15
SNRPA1-213ENST00000560856 ERBB2P04626 1255 aa15.96■□□□□ 0.15
SNRPA1-213ENST00000560856 HMBSP08397 361 aa15.96■□□□□ 0.15
SNRPA1-213ENST00000560856 MMEP08473 750 aa15.96■□□□□ 0.15
SNRPA1-213ENST00000560856 SLC6A11P48066 632 aa15.96■□□□□ 0.15
SNRPA1-213ENST00000560856 PTPN5P54829 565 aa15.96■□□□□ 0.15
SNRPA1-213ENST00000560856 GOLGA8FQ08AF8 430 aa15.96■□□□□ 0.15
SNRPA1-213ENST00000560856 GOLGA8DPQ0D2H9 430 aa15.96■□□□□ 0.15
SNRPA1-213ENST00000560856 MTAPQ13126 283 aa15.96■□□□□ 0.15
SNRPA1-213ENST00000560856 ANGPT1Q15389 498 aa15.96■□□□□ 0.15
SNRPA1-213ENST00000560856 TAF5Q15542 800 aa15.96■□□□□ 0.15
SNRPA1-213ENST00000560856 TAF3Q5VWG9 929 aa15.96■□□□□ 0.15
SNRPA1-213ENST00000560856 Q6ZS52 159 aa15.96■□□□□ 0.15
SNRPA1-213ENST00000560856 C12orf40Q86WS4 652 aa15.96■□□□□ 0.15
SNRPA1-213ENST00000560856 ETFBKMTQ8IXQ9 262 aa15.96■□□□□ 0.15
SNRPA1-213ENST00000560856 RNF139Q8WU17 664 aa15.96■□□□□ 0.15
SNRPA1-213ENST00000560856 SLC20A1Q8WUM9 679 aa15.96■□□□□ 0.15
SNRPA1-213ENST00000560856 CD101Q93033 1021 aa15.96■□□□□ 0.15
SNRPA1-213ENST00000560856 LSM7Q9UK45 103 aaKnown RBP15.96■□□□□ 0.15
SNRPA1-213ENST00000560856 STRIP2Q9ULQ0 834 aa15.96■□□□□ 0.15
SNRPA1-213ENST00000560856 HBS1LQ9Y450 684 aaKnown RBP15.96■□□□□ 0.15
SNRPA1-213ENST00000560856 ATG2BQ96BY7 2078 aa15.96■□□□□ 0.15
SNRPA1-213ENST00000560856 A0A1W2PQC6 194 aa15.95■□□□□ 0.14
SNRPA1-213ENST00000560856 H0Y858 1186 aa15.95■□□□□ 0.14
SNRPA1-213ENST00000560856 GFRA2O00451 464 aa15.95■□□□□ 0.14
SNRPA1-213ENST00000560856 MSI1O43347 362 aaKnown RBP15.95■□□□□ 0.14
SNRPA1-213ENST00000560856 ADH1CP00326 375 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms