RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 TMEM63CQ9P1W3 806 aa6.96□□□□□ -1.3
HERC1-208ENST00000560462 STRIP2Q9ULQ0 834 aa6.96□□□□□ -1.3
HERC1-208ENST00000560462 MN1Q10571 1320 aaPredicted RBP6.96□□□□□ -1.3
HERC1-208ENST00000560462 ARHGEF17Q96PE2 2063 aaPredicted RBP6.96□□□□□ -1.3
HERC1-208ENST00000560462 CSPG4Q6UVK1 2322 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 HEATR9A2RTY3 570 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 PMS2P1A4D2B8 440 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 KCNJ18B7U540 433 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 FAM86B1E9PN63 330 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 TSPAN3O60637 253 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 GADD45BO75293 160 aaPredicted RBP6.95□□□□□ -1.3
HERC1-208ENST00000560462 CLSTN1O94985 981 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 CKMP06732 381 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 ITGA2BP08514 1039 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 FAM86B2P0C5J1 330 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 OR4Q2P0C623 313 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 TIMP2P16035 220 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 HSD3B2P26439 372 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 ARRB1P49407 418 aaPredicted RBP6.95□□□□□ -1.3
HERC1-208ENST00000560462 TPMTP51580 245 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 WDR4P57081 412 aaKnown RBP6.95□□□□□ -1.3
HERC1-208ENST00000560462 NLRP12P59046 1061 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 EIF2S3LQ2VIR3 472 aaKnown RBP6.95□□□□□ -1.3
HERC1-208ENST00000560462 GLRA4Q5JXX5 417 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 SFMBT2Q5VUG0 894 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 TMEM150AQ86TG1 271 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 VASH2Q86V25 355 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 MIB1Q86YT6 1006 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 MEIOBQ8N635 442 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 ATAD1Q8NBU5 361 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 MRPS31Q92665 395 aaKnown RBP6.95□□□□□ -1.3
HERC1-208ENST00000560462 TMEM143Q96AN5 459 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 GRAMD1AQ96CP6 724 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 MRFAP1L1Q96HT8 127 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 PGBD1Q96JS3 809 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 SPON2Q9BUD6 331 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 NUP58Q9BVL2 599 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 ZFAND3Q9H8U3 227 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 LATS2Q9NRM7 1088 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 KBTBD4Q9NVX7 518 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 ZSWIM5Q9P217 1185 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 ERRFI1Q9UJM3 462 aaPredicted RBP6.95□□□□□ -1.3
HERC1-208ENST00000560462 PPM1HQ9ULR3 514 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.95□□□□□ -1.3
HERC1-208ENST00000560462 NUB1Q9Y5A7 615 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 JMJD1CQ15652 2540 aa6.95□□□□□ -1.3
HERC1-208ENST00000560462 BAZ2BQ9UIF8 2168 aaKnown RBP6.95□□□□□ -1.3
HERC1-208ENST00000560462 DCHS2Q6V1P9 2916 aa6.94□□□□□ -1.3
HERC1-208ENST00000560462 IGLV3-22A0A075B6J6 115 aa6.94□□□□□ -1.3
HERC1-208ENST00000560462 A0A1B0GUA9 196 aa6.94□□□□□ -1.3
HERC1-208ENST00000560462 PRR19A6NJB7 356 aa6.94□□□□□ -1.3
HERC1-208ENST00000560462 VILLO15195 856 aa6.94□□□□□ -1.3
HERC1-208ENST00000560462 B4GALT5O43286 388 aa6.94□□□□□ -1.3
HERC1-208ENST00000560462 LIPCP11150 499 aa6.94□□□□□ -1.3
HERC1-208ENST00000560462 CD99P14209 185 aa6.94□□□□□ -1.3
HERC1-208ENST00000560462 WT1P19544 449 aaPredicted RBP6.94□□□□□ -1.3
HERC1-208ENST00000560462 GPR17Q13304 367 aa6.94□□□□□ -1.3
HERC1-208ENST00000560462 LACTB2Q53H82 288 aaPredicted RBP6.94□□□□□ -1.3
HERC1-208ENST00000560462 C10orf76Q5T2E6 689 aa6.94□□□□□ -1.3
HERC1-208ENST00000560462 GDF7Q7Z4P5 450 aa6.94□□□□□ -1.3
HERC1-208ENST00000560462 TEX19Q8NA77 164 aa6.94□□□□□ -1.3
HERC1-208ENST00000560462 SH3RF2Q8TEC5 729 aa6.94□□□□□ -1.3
HERC1-208ENST00000560462 HSH2DQ96JZ2 352 aa6.94□□□□□ -1.3
HERC1-208ENST00000560462 PPP1R10Q96QC0 940 aaKnown RBP6.94□□□□□ -1.3
HERC1-208ENST00000560462 ACOX2Q99424 681 aa6.94□□□□□ -1.3
HERC1-208ENST00000560462 SEPT5Q99719 369 aaPredicted RBP6.94□□□□□ -1.3
HERC1-208ENST00000560462 OXCT2Q9BYC2 517 aaPredicted RBP6.94□□□□□ -1.3
HERC1-208ENST00000560462 TMEM206Q9H813 350 aa6.94□□□□□ -1.3
HERC1-208ENST00000560462 PTPRHQ9HD43 1115 aa6.94□□□□□ -1.3
HERC1-208ENST00000560462 NEUROD4Q9HD90 331 aa6.94□□□□□ -1.3
HERC1-208ENST00000560462 ABI2Q9NYB9 513 aaPredicted RBP6.94□□□□□ -1.3
HERC1-208ENST00000560462 STARD13Q9Y3M8 1113 aa6.94□□□□□ -1.3
HERC1-208ENST00000560462 RAD54BQ9Y620 910 aa6.94□□□□□ -1.3
HERC1-208ENST00000560462 MTMR11A4FU01 709 aa6.93□□□□□ -1.3
HERC1-208ENST00000560462 TTLL8A6PVC2 850 aa6.93□□□□□ -1.3
HERC1-208ENST00000560462 K7ELQ4 463 aaPredicted RBP6.93□□□□□ -1.3
HERC1-208ENST00000560462 PODXLO00592 558 aa6.93□□□□□ -1.3
HERC1-208ENST00000560462 ASAP2O43150 1006 aa6.93□□□□□ -1.3
HERC1-208ENST00000560462 SPINT1O43278 529 aa6.93□□□□□ -1.3
HERC1-208ENST00000560462 STBD1O95210 358 aa6.93□□□□□ -1.3
HERC1-208ENST00000560462 FOSP01100 380 aaPredicted RBP6.93□□□□□ -1.3
HERC1-208ENST00000560462 IGLV3-19P01714 112 aa6.93□□□□□ -1.3
HERC1-208ENST00000560462 F11P03951 625 aa6.93□□□□□ -1.3
HERC1-208ENST00000560462 RARGP13631 454 aa6.93□□□□□ -1.3
HERC1-208ENST00000560462 CD1EP15812 388 aa6.93□□□□□ -1.3
HERC1-208ENST00000560462 ATF6P18850 670 aa6.93□□□□□ -1.3
HERC1-208ENST00000560462 CD27P26842 260 aa6.93□□□□□ -1.3
HERC1-208ENST00000560462 SLC5A2P31639 672 aa6.93□□□□□ -1.3
HERC1-208ENST00000560462 SFNP31947 248 aa6.93□□□□□ -1.3
HERC1-208ENST00000560462 PTENP60484 403 aa6.93□□□□□ -1.3
HERC1-208ENST00000560462 MBTD1Q05BQ5 628 aa6.93□□□□□ -1.3
HERC1-208ENST00000560462 DHCR24Q15392 516 aa6.93□□□□□ -1.3
HERC1-208ENST00000560462 JAKMIP3Q5VZ66 844 aa6.93□□□□□ -1.3
HERC1-208ENST00000560462 SP5Q6BEB4 398 aaPredicted RBP6.93□□□□□ -1.3
HERC1-208ENST00000560462 JAZF1Q86VZ6 243 aa6.93□□□□□ -1.3
HERC1-208ENST00000560462 RELL1Q8IUW5 271 aa6.93□□□□□ -1.3
HERC1-208ENST00000560462 EXOC8Q8IYI6 725 aa6.93□□□□□ -1.3
HERC1-208ENST00000560462 WDR36Q8NI36 951 aaKnown RBP6.93□□□□□ -1.3
HERC1-208ENST00000560462 CPT1CQ8TCG5 803 aa6.93□□□□□ -1.3
HERC1-208ENST00000560462 SKA1Q96BD8 255 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms