RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 CXCL10P02778 98 aa11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 LTFP02788 710 aa11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 COL6A1P12109 1028 aa11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 ATF2P15336 505 aa11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 TYMPP19971 482 aa11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 AMPD1P23109 780 aa11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 NOS2P35228 1153 aa11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 VCPP55072 806 aaKnown RBP11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 DEFB103AP81534 67 aa11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 GPS1Q13098 491 aa11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 CALCOCO2Q13137 446 aa11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 OASLQ15646 514 aaKnown RBP11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 CFAP58Q5T655 872 aa11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 FUT10Q6P4F1 479 aa11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 PLD5Q8N7P1 536 aa11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 FAM71DQ8N9W8 422 aa11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 GRK7Q8WTQ7 553 aa11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 ART4Q93070 314 aa11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 TRIM43Q96BQ3 446 aaPredicted RBP11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 CRISPLD1Q9H336 500 aa11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 CENPHQ9H3R5 247 aa11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 SEMA4AQ9H3S1 761 aa11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 CYLDQ9NQC7 956 aa11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 TBX21Q9UL17 535 aa11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 CHD7Q9P2D1 2997 aa11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 FNDC1Q4ZHG4 1894 aaPredicted RBP11.32□□□□□ -0.6
SNRPA1-211ENST00000560433 FAM72CH0Y354 149 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 GOLGA8MH3BSY2 632 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 TRAPPC3O43617 180 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 CSPG5O95196 566 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 CLTBP09497 229 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 RBP3P10745 1247 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 KLRC2P26717 231 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 HSPA9P38646 679 aaKnown RBP11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 EIF3EP60228 445 aaKnown RBP11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 GAD2Q05329 585 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 PTK6Q13882 451 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 TAZQ16635 292 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 SPOUT1Q5T280 376 aaKnown RBP11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 FAM72AQ5TYM5 149 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 BSPRYQ5W0U4 402 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 FAM72DQ6L9T8 149 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 FAM72BQ86X60 149 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 ALLCQ8N6M5 410 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 P3H4Q92791 437 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 APBB2Q92870 758 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 ARL8AQ96BM9 186 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 NPY6RQ99463 290 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 CNGB3Q9NQW8 809 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 DDIT4Q9NX09 232 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 CWC15Q9P013 229 aaKnown RBP11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 SFMBT1Q9UHJ3 866 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 MICAL3Q7RTP6 2002 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 APOC4-APOC2K7ER74 178 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 OAZ2O95190 189 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 APOC2P02655 101 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 CPB1P15086 417 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 DESP17661 470 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 PTPN7P35236 360 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 GJA8P48165 433 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 USP46P62068 366 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 GBE1Q04446 702 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 SLC10A2Q12908 348 aaPredicted RBP11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 IKBKEQ14164 716 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 HSP90B2PQ58FF3 399 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 IZUMO3Q5VZ72 239 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 FBXO46Q6PJ61 603 aaPredicted RBP11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 OTOP2Q7RTS6 562 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 TP53INP2Q8IXH6 220 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 IQCKQ8N0W5 287 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 SLC35B2Q8TB61 432 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 SLCO2A1Q92959 643 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 SNF8Q96H20 258 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 TOX2Q96NM4 488 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 SLC2A13Q96QE2 648 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 ZCWPW1Q9H0M4 648 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 VIPAS39Q9H9C1 493 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 PRDM10Q9NQV6 1147 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 HOMER3Q9NSC5 361 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 FZD10Q9ULW2 581 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 PTPRDP23468 1912 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 TANC1Q9C0D5 1861 aa11.31□□□□□ -0.6
SNRPA1-211ENST00000560433 F5H423 210 aaPredicted RBP11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 H7C0C1 242 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 TMEM189-UBE2V1I3L0A0 370 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 MDM4O15151 490 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 ADAM12O43184 909 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 MSI1O43347 362 aaKnown RBP11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 RNF40O75150 1001 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 SHBGP04278 402 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 HSPA8P11142 646 aaKnown RBP11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 ATP5OP48047 213 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 DRG2P55039 364 aaKnown RBP11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 NNTQ13423 1086 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 MTMR3Q13615 1198 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 DNAJC21Q5F1R6 531 aaKnown RBP11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 DARS2Q6PI48 645 aaKnown RBP11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 RNF19BQ6ZMZ0 732 aa11.3□□□□□ -0.6
SNRPA1-211ENST00000560433 STRADAQ7RTN6 431 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms