RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 FOXD2O60548 495 aaPredicted RBP21.49■■□□□ 1.03
CHRNA3-207ENST00000559941 STC2O76061 302 aa21.49■■□□□ 1.03
CHRNA3-207ENST00000559941 KLF8O95600 359 aaPredicted RBP21.49■■□□□ 1.03
CHRNA3-207ENST00000559941 BCAT1P54687 386 aa21.49■■□□□ 1.03
CHRNA3-207ENST00000559941 PDE4CQ08493 712 aa21.49■■□□□ 1.03
CHRNA3-207ENST00000559941 PLK5Q496M5 336 aa21.49■■□□□ 1.03
CHRNA3-207ENST00000559941 PM20D1Q6GTS8 502 aa21.49■■□□□ 1.03
CHRNA3-207ENST00000559941 TMEM92Q6UXU6 159 aa21.49■■□□□ 1.03
CHRNA3-207ENST00000559941 PRR23CQ6ZRP0 262 aa21.49■■□□□ 1.03
CHRNA3-207ENST00000559941 NUDT18Q6ZVK8 323 aa21.49■■□□□ 1.03
CHRNA3-207ENST00000559941 CNOT6LQ96LI5 555 aaKnown RBP21.49■■□□□ 1.03
CHRNA3-207ENST00000559941 NT5C1BQ96P26 610 aa21.49■■□□□ 1.03
CHRNA3-207ENST00000559941 ARRDC1-AS1Q9H2J1 176 aa21.49■■□□□ 1.03
CHRNA3-207ENST00000559941 WDR35Q9P2L0 1181 aa21.49■■□□□ 1.03
CHRNA3-207ENST00000559941 HESX1Q9UBX0 185 aa21.49■■□□□ 1.03
CHRNA3-207ENST00000559941 CDV3Q9UKY7 258 aaKnown RBP21.49■■□□□ 1.03
CHRNA3-207ENST00000559941 CTNND2Q9UQB3 1225 aa21.49■■□□□ 1.03
CHRNA3-207ENST00000559941 NUP205Q92621 2012 aa21.48■■□□□ 1.03
CHRNA3-207ENST00000559941 SGK1O00141 431 aa21.48■■□□□ 1.03
CHRNA3-207ENST00000559941 TULP2O00295 520 aa21.48■■□□□ 1.03
CHRNA3-207ENST00000559941 GNA14O95837 355 aa21.48■■□□□ 1.03
CHRNA3-207ENST00000559941 HNRNPLP14866 589 aaKnown RBP eCLIP21.48■■□□□ 1.03
CHRNA3-207ENST00000559941 CD19P15391 556 aa21.48■■□□□ 1.03
CHRNA3-207ENST00000559941 TKTL1P51854 596 aa21.48■■□□□ 1.03
CHRNA3-207ENST00000559941 COG7P83436 770 aa21.48■■□□□ 1.03
CHRNA3-207ENST00000559941 BST2Q10589 180 aaKnown RBP21.48■■□□□ 1.03
CHRNA3-207ENST00000559941 CETN1Q12798 172 aa21.48■■□□□ 1.03
CHRNA3-207ENST00000559941 EOGTQ5NDL2 527 aa21.48■■□□□ 1.03
CHRNA3-207ENST00000559941 TPGS1Q6ZTW0 290 aa21.48■■□□□ 1.03
CHRNA3-207ENST00000559941 MIB1Q86YT6 1006 aa21.48■■□□□ 1.03
CHRNA3-207ENST00000559941 TERB1Q8NA31 727 aa21.48■■□□□ 1.03
CHRNA3-207ENST00000559941 LMO3Q8TAP4 145 aa21.48■■□□□ 1.03
CHRNA3-207ENST00000559941 KCNV2Q8TDN2 545 aa21.48■■□□□ 1.03
CHRNA3-207ENST00000559941 XPO6Q96QU8 1125 aaKnown RBP21.48■■□□□ 1.03
CHRNA3-207ENST00000559941 BBS2Q9BXC9 721 aa21.48■■□□□ 1.03
CHRNA3-207ENST00000559941 DUSP15Q9H1R2 295 aaPredicted RBP21.48■■□□□ 1.03
CHRNA3-207ENST00000559941 RASAL2Q9UJF2 1139 aa21.48■■□□□ 1.03
CHRNA3-207ENST00000559941 ZNF510Q9Y2H8 683 aa21.48■■□□□ 1.03
CHRNA3-207ENST00000559941 PCDHGA5Q9Y5G8 931 aa21.48■■□□□ 1.03
CHRNA3-207ENST00000559941 NEDD8-MDP1E9PL57 170 aa21.47■■□□□ 1.03
CHRNA3-207ENST00000559941 O00370 1275 aa21.47■■□□□ 1.03
CHRNA3-207ENST00000559941 DCLK1O15075 740 aa21.47■■□□□ 1.03
CHRNA3-207ENST00000559941 CACNG3O60359 315 aa21.47■■□□□ 1.03
CHRNA3-207ENST00000559941 ALDH1A2O94788 518 aa21.47■■□□□ 1.03
CHRNA3-207ENST00000559941 ZBED1O96006 694 aa21.47■■□□□ 1.03
CHRNA3-207ENST00000559941 PAEPP09466 180 aa21.47■■□□□ 1.03
CHRNA3-207ENST00000559941 TYRP14679 529 aa21.47■■□□□ 1.03
CHRNA3-207ENST00000559941 ATXN1P54253 815 aaKnown RBP21.47■■□□□ 1.03
CHRNA3-207ENST00000559941 MARSP56192 900 aaKnown RBP21.47■■□□□ 1.03
CHRNA3-207ENST00000559941 STX17P56962 302 aa21.47■■□□□ 1.03
CHRNA3-207ENST00000559941 YWHAGP61981 247 aaKnown RBP eCLIP21.47■■□□□ 1.03
CHRNA3-207ENST00000559941 EFEMP1Q12805 493 aa21.47■■□□□ 1.03
CHRNA3-207ENST00000559941 PAK1Q13153 545 aa21.47■■□□□ 1.03
CHRNA3-207ENST00000559941 USP39Q53GS9 565 aaKnown RBP21.47■■□□□ 1.03
CHRNA3-207ENST00000559941 ANO7Q6IWH7 933 aa21.47■■□□□ 1.03
CHRNA3-207ENST00000559941 TMEM270Q6UE05 265 aa21.47■■□□□ 1.03
CHRNA3-207ENST00000559941 TRIM59Q8IWR1 403 aa21.47■■□□□ 1.03
CHRNA3-207ENST00000559941 TPSD1Q9BZJ3 242 aa21.47■■□□□ 1.03
CHRNA3-207ENST00000559941 ULBP1Q9BZM6 244 aa21.47■■□□□ 1.03
CHRNA3-207ENST00000559941 LRRC4Q9HBW1 653 aa21.47■■□□□ 1.03
CHRNA3-207ENST00000559941 DNAJC17Q9NVM6 304 aaKnown RBP21.47■■□□□ 1.03
CHRNA3-207ENST00000559941 STARD13Q9Y3M8 1113 aa21.47■■□□□ 1.03
CHRNA3-207ENST00000559941 TRIM24O15164 1050 aa21.46■■□□□ 1.03
CHRNA3-207ENST00000559941 ADAM23O75077 832 aa21.46■■□□□ 1.03
CHRNA3-207ENST00000559941 RHOBTB1O94844 696 aa21.46■■□□□ 1.03
CHRNA3-207ENST00000559941 KLKB1P03952 638 aa21.46■■□□□ 1.03
CHRNA3-207ENST00000559941 ZNF806P0C7X5 589 aa21.46■■□□□ 1.03
CHRNA3-207ENST00000559941 KCNH2Q12809 1159 aa21.46■■□□□ 1.03
CHRNA3-207ENST00000559941 PKDCCQ504Y2 493 aa21.46■■□□□ 1.03
CHRNA3-207ENST00000559941 C10orf76Q5T2E6 689 aa21.46■■□□□ 1.03
CHRNA3-207ENST00000559941 GRAMD4Q6IC98 578 aa21.46■■□□□ 1.03
CHRNA3-207ENST00000559941 BHLHA9Q7RTU4 235 aa21.46■■□□□ 1.03
CHRNA3-207ENST00000559941 TRIML1Q8N9V2 468 aa21.46■■□□□ 1.03
CHRNA3-207ENST00000559941 EHBP1Q8NDI1 1231 aa21.46■■□□□ 1.03
CHRNA3-207ENST00000559941 MDGA1Q8NFP4 955 aa21.46■■□□□ 1.03
CHRNA3-207ENST00000559941 UBA3Q8TBC4 463 aa21.46■■□□□ 1.03
CHRNA3-207ENST00000559941 NETO1Q8TDF5 533 aa21.46■■□□□ 1.03
CHRNA3-207ENST00000559941 RTKNQ9BST9 563 aa21.46■■□□□ 1.03
CHRNA3-207ENST00000559941 DCLK3Q9C098 648 aa21.46■■□□□ 1.03
CHRNA3-207ENST00000559941 POLMQ9NP87 494 aaPredicted RBP21.46■■□□□ 1.03
CHRNA3-207ENST00000559941 ZDHHC4Q9NPG8 344 aa21.46■■□□□ 1.03
CHRNA3-207ENST00000559941 PCDHB4Q9Y5E5 795 aa21.46■■□□□ 1.03
CHRNA3-207ENST00000559941 PLXND1Q9Y4D7 1925 aa21.46■■□□□ 1.03
CHRNA3-207ENST00000559941 SETSIPP0DME0 302 aa21.45■■□□□ 1.02
CHRNA3-207ENST00000559941 UBE2HP62256 183 aa21.45■■□□□ 1.02
CHRNA3-207ENST00000559941 ELF2Q15723 593 aa21.45■■□□□ 1.02
CHRNA3-207ENST00000559941 PLA2G2CQ5R387 149 aa21.45■■□□□ 1.02
CHRNA3-207ENST00000559941 LCLAT1Q6UWP7 414 aa21.45■■□□□ 1.02
CHRNA3-207ENST00000559941 RSRC2Q7L4I2 434 aaKnown RBP21.45■■□□□ 1.02
CHRNA3-207ENST00000559941 TRMT11Q7Z4G4 463 aaKnown RBP21.45■■□□□ 1.02
CHRNA3-207ENST00000559941 C11orf74Q86VG3 221 aa21.45■■□□□ 1.02
CHRNA3-207ENST00000559941 PPM1KQ8N3J5 372 aa21.45■■□□□ 1.02
CHRNA3-207ENST00000559941 ZNF513Q8N8E2 541 aaPredicted RBP21.45■■□□□ 1.02
CHRNA3-207ENST00000559941 OLIG1Q8TAK6 271 aa21.45■■□□□ 1.02
CHRNA3-207ENST00000559941 KCTD13Q8WZ19 329 aa21.45■■□□□ 1.02
CHRNA3-207ENST00000559941 TFAP2BQ92481 460 aa21.45■■□□□ 1.02
CHRNA3-207ENST00000559941 KAT5Q92993 513 aa21.45■■□□□ 1.02
CHRNA3-207ENST00000559941 SRRTQ9BXP5 876 aaKnown RBP21.45■■□□□ 1.02
CHRNA3-207ENST00000559941 MARCH2Q9P0N8 246 aa21.45■■□□□ 1.02
CHRNA3-207ENST00000559941 HCN2Q9UL51 889 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms