RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 SOX1O00570 391 aaPredicted RBP5.51□□□□□ -1.53
SPG11-220ENST00000559933 AKR1B10O60218 316 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 NDUFA10O95299 355 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 SEC24AO95486 1093 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 SOD2P04179 222 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 ERBB2P04626 1255 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 VDRP11473 427 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 EDN3P14138 238 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 TYMPP19971 482 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 ABCB4P21439 1286 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 TNFAIP3P21580 790 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 BDNFP23560 247 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 CYP2F1P24903 491 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 BMPR1AP36894 532 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 GLUD2P49448 558 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 MAP3K7CLP57077 242 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 YWHAEP62258 255 aaKnown RBP5.51□□□□□ -1.53
SPG11-220ENST00000559933 PDE4CQ08493 712 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 IFRD2Q12894 506 aaPredicted RBP5.51□□□□□ -1.53
SPG11-220ENST00000559933 MRPL58Q14197 206 aaKnown RBP5.51□□□□□ -1.53
SPG11-220ENST00000559933 PTPN14Q15678 1187 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 SLC18A3Q16572 532 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 CLEC16AQ2KHT3 1053 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 SGO2Q562F6 1265 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 CCDC122Q5T0U0 273 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 PMF1Q6P1K2 205 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 PRR23CQ6ZRP0 262 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 MMS22LQ6ZRQ5 1243 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 ADGRD2Q7Z7M1 963 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 METTL23Q86XA0 190 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 TMTC1Q8IUR5 882 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 TDHQ8IZJ6 230 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 FUKQ8N0W3 1084 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 TMEM86AQ8N2M4 240 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 ATAD1Q8NBU5 361 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 ZMIZ2Q8NF64 920 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 SPPL3Q8TCT6 385 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 IQCDQ96DY2 449 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 CCDC42Q96M95 316 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 CPXM1Q96SM3 734 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 KCNK16Q96T55 309 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 SEPT5Q99719 369 aaPredicted RBP5.51□□□□□ -1.53
SPG11-220ENST00000559933 SMOQ99835 787 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 TCF25Q9BQ70 676 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 CLSTN3Q9BQT9 956 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 TRIM7Q9C029 511 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 ADAM19Q9H013 955 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 ZCWPW1Q9H0M4 648 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 THAP2Q9H0W7 228 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 PRO3102Q9H379 93 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 ZFP64Q9NPA5 681 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 LZTFL1Q9NQ48 299 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 ENTPD7Q9NQZ7 604 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 MYO1AQ9UBC5 1043 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 MTRRQ9UBK8 725 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 SALL4Q9UJQ4 1053 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 CDH9Q9ULB4 789 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 MYO6Q9UM54 1294 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 USTQ9Y2C2 406 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 PCDHB12Q9Y5F1 795 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 PCDHA11Q9Y5I1 949 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 DUSP10Q9Y6W6 482 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 MYO16Q9Y6X6 1858 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 TRANK1O15050 2925 aa5.51□□□□□ -1.53
SPG11-220ENST00000559933 TRIOBPQ9H2D6 2365 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 MYO7AQ13402 2215 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 MYH10P35580 1976 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 SSU72P8A0A1W2PR75 194 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 A6NHS1 94 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 EIF3CLB5ME19 914 aaKnown RBP5.5□□□□□ -1.53
SPG11-220ENST00000559933 E5RJQ4 531 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 F8VP50 259 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 GOLGA8SH3BPF8 625 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 SYN3O14994 580 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 PER2O15055 1255 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 TEX28O15482 410 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 ARHGAP6O43182 974 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 SART1O43290 800 aaKnown RBP5.5□□□□□ -1.53
SPG11-220ENST00000559933 TRAPPC3O43617 180 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 TBC1D4O60343 1298 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 GRAP2O75791 330 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 OAZ2O95190 189 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 CYP1A1P04798 512 aaPredicted RBP5.5□□□□□ -1.53
SPG11-220ENST00000559933 URODP06132 367 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 PAEPP09466 180 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 CNPP09543 421 aaKnown RBP5.5□□□□□ -1.53
SPG11-220ENST00000559933 FAM200BP0CF97 657 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 UNGP13051 313 aaPredicted RBP5.5□□□□□ -1.53
SPG11-220ENST00000559933 LCP1P13796 627 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 EPHA1P21709 976 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 RRM1P23921 792 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 PCSK1P29120 753 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 OR1D2P34982 312 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 GTF2F1P35269 517 aaKnown RBP eCLIP5.5□□□□□ -1.53
SPG11-220ENST00000559933 CYLC1P35663 651 aaPredicted RBP5.5□□□□□ -1.53
SPG11-220ENST00000559933 PPM1AP35813 382 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 ARHGAP25P42331 645 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 LHX1P48742 406 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 PGFP49763 221 aa5.5□□□□□ -1.53
SPG11-220ENST00000559933 NDUFV1P49821 464 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms