RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 EFEMP1Q12805 493 aa14.32□□□□□ -0.12
CHRNB4-204ENST00000559849 PDCLQ13371 301 aa14.32□□□□□ -0.12
CHRNB4-204ENST00000559849 NR1I3Q14994 352 aa14.32□□□□□ -0.12
CHRNB4-204ENST00000559849 LRSAM1Q6UWE0 723 aa14.32□□□□□ -0.12
CHRNB4-204ENST00000559849 PASD1Q8IV76 773 aa14.32□□□□□ -0.12
CHRNB4-204ENST00000559849 PRRX2Q99811 253 aa14.32□□□□□ -0.12
CHRNB4-204ENST00000559849 MARCH2Q9P0N8 246 aa14.32□□□□□ -0.12
CHRNB4-204ENST00000559849 LSM7Q9UK45 103 aaKnown RBP14.32□□□□□ -0.12
CHRNB4-204ENST00000559849 CACNA1HO95180 2353 aa14.32□□□□□ -0.12
CHRNB4-204ENST00000559849 MYOFQ9NZM1 2061 aa14.31□□□□□ -0.12
CHRNB4-204ENST00000559849 COL4A3Q01955 1670 aa14.31□□□□□ -0.12
CHRNB4-204ENST00000559849 A0A1W2PQC6 194 aa14.31□□□□□ -0.12
CHRNB4-204ENST00000559849 E5RJQ4 531 aa14.31□□□□□ -0.12
CHRNB4-204ENST00000559849 GFPT2O94808 682 aa14.31□□□□□ -0.12
CHRNB4-204ENST00000559849 LTFP02788 710 aa14.31□□□□□ -0.12
CHRNB4-204ENST00000559849 DCNP07585 359 aaKnown RBP14.31□□□□□ -0.12
CHRNB4-204ENST00000559849 IRF1P10914 325 aa14.31□□□□□ -0.12
CHRNB4-204ENST00000559849 COL9A1P20849 921 aa14.31□□□□□ -0.12
CHRNB4-204ENST00000559849 TARSP26639 723 aaKnown RBP14.31□□□□□ -0.12
CHRNB4-204ENST00000559849 GJA4P35212 333 aa14.31□□□□□ -0.12
CHRNB4-204ENST00000559849 CACNA2D4Q7Z3S7 1137 aa14.31□□□□□ -0.12
CHRNB4-204ENST00000559849 ZNF677Q86XU0 584 aa14.31□□□□□ -0.12
CHRNB4-204ENST00000559849 TMEM35BQ8NCS4 154 aa14.31□□□□□ -0.12
CHRNB4-204ENST00000559849 EPS8L1Q8TE68 723 aa14.31□□□□□ -0.12
CHRNB4-204ENST00000559849 DDX1Q92499 740 aaKnown RBP14.31□□□□□ -0.12
CHRNB4-204ENST00000559849 EDEM1Q92611 657 aa14.31□□□□□ -0.12
CHRNB4-204ENST00000559849 PPP1R13BQ96KQ4 1090 aa14.31□□□□□ -0.12
CHRNB4-204ENST00000559849 KCNH6Q9H252 994 aa14.31□□□□□ -0.12
CHRNB4-204ENST00000559849 RASAL2Q9UJF2 1139 aa14.31□□□□□ -0.12
CHRNB4-204ENST00000559849 NDRG2Q9UN36 371 aaKnown RBP14.31□□□□□ -0.12
CHRNB4-204ENST00000559849 KMT2EQ8IZD2 1858 aa14.31□□□□□ -0.12
CHRNB4-204ENST00000559849 SCAMP3O14828 347 aaKnown RBP14.3□□□□□ -0.12
CHRNB4-204ENST00000559849 FANCCQ00597 558 aa14.3□□□□□ -0.12
CHRNB4-204ENST00000559849 TXNDC11Q6PKC3 985 aa14.3□□□□□ -0.12
CHRNB4-204ENST00000559849 CCDC105Q8IYK2 499 aa14.3□□□□□ -0.12
CHRNB4-204ENST00000559849 CLEC4CQ8WTT0 213 aa14.3□□□□□ -0.12
CHRNB4-204ENST00000559849 EXOC4Q96A65 974 aa14.3□□□□□ -0.12
CHRNB4-204ENST00000559849 DLGAP2Q9P1A6 1054 aa14.3□□□□□ -0.12
CHRNB4-204ENST00000559849 CACNA1IQ9P0X4 2223 aa14.3□□□□□ -0.12
CHRNB4-204ENST00000559849 PAPSS1O43252 624 aaPredicted RBP14.3□□□□□ -0.12
CHRNB4-204ENST00000559849 GREM1O60565 184 aa14.3□□□□□ -0.12
CHRNB4-204ENST00000559849 FZD5Q13467 585 aa14.3□□□□□ -0.12
CHRNB4-204ENST00000559849 NOP9Q86U38 636 aaKnown RBP14.3□□□□□ -0.12
CHRNB4-204ENST00000559849 BBS7Q8IWZ6 715 aa14.3□□□□□ -0.12
CHRNB4-204ENST00000559849 ZNF687Q8N1G0 1237 aa14.3□□□□□ -0.12
CHRNB4-204ENST00000559849 C1orf131Q8NDD1 294 aaKnown RBP14.3□□□□□ -0.12
CHRNB4-204ENST00000559849 WBP2Q969T9 261 aa14.3□□□□□ -0.12
CHRNB4-204ENST00000559849 CLDN23Q96B33 292 aa14.3□□□□□ -0.12
CHRNB4-204ENST00000559849 CPXM1Q96SM3 734 aa14.3□□□□□ -0.12
CHRNB4-204ENST00000559849 TRIM62Q9BVG3 475 aa14.3□□□□□ -0.12
CHRNB4-204ENST00000559849 DCLK3Q9C098 648 aa14.3□□□□□ -0.12
CHRNB4-204ENST00000559849 TSPY26PQ9H489 355 aa14.3□□□□□ -0.12
CHRNB4-204ENST00000559849 STC2O76061 302 aa14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 CDH5P33151 784 aaPredicted RBP14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 MAGEA9P43362 315 aa14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 RPS9P46781 194 aaKnown RBP14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 UBASH3AP57075 661 aa14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 DHCR24Q15392 516 aa14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 TAF3Q5VWG9 929 aa14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 RHBDF2Q6PJF5 856 aa14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 BEND5Q7L4P6 421 aa14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 FAM149B1Q96BN6 582 aa14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 SYNCQ9H7C4 482 aa14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 ZNF510Q9Y2H8 683 aa14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 SLC12A8A0AV02 714 aa14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 TRDMT1O14717 391 aaKnown RBP14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 LSM8O95777 96 aaKnown RBP14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 ADH1CP00326 375 aa14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 CYP17A1P05093 508 aa14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 CCDC172P0C7W6 258 aa14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 NCAM1P13591 858 aa14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 YWHAZP63104 245 aaKnown RBP14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 CDR2Q01850 454 aa14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 PON2Q15165 354 aa14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 FMNL3Q8IVF7 1028 aa14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 DTWD2Q8NBA8 298 aa14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 IPO4Q8TEX9 1081 aaKnown RBP14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 CHFRQ96EP1 664 aa14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 LMAN1LQ9HAT1 526 aa14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 SFMBT1Q9UHJ3 866 aa14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 NOCTQ9UK39 431 aaKnown RBP14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 MYO6Q9UM54 1294 aa14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 HBS1LQ9Y450 684 aaKnown RBP14.29□□□□□ -0.12
CHRNB4-204ENST00000559849 CAPN9O14815 690 aa14.28□□□□□ -0.12
CHRNB4-204ENST00000559849 HMBSP08397 361 aa14.28□□□□□ -0.12
CHRNB4-204ENST00000559849 MMEP08473 750 aa14.28□□□□□ -0.12
CHRNB4-204ENST00000559849 CHRNB1P11230 501 aa14.28□□□□□ -0.12
CHRNB4-204ENST00000559849 GALK1P51570 392 aa14.28□□□□□ -0.12
CHRNB4-204ENST00000559849 GRSF1Q12849 480 aaKnown RBP eCLIP14.28□□□□□ -0.12
CHRNB4-204ENST00000559849 EFHC1Q5JVL4 640 aa14.28□□□□□ -0.12
CHRNB4-204ENST00000559849 LY6G5CQ5SRR4 150 aa14.28□□□□□ -0.12
CHRNB4-204ENST00000559849 MSANTD2Q6P1R3 559 aa14.28□□□□□ -0.12
CHRNB4-204ENST00000559849 Q6ZNB5 142 aa14.28□□□□□ -0.12
CHRNB4-204ENST00000559849 PLD4Q96BZ4 506 aa14.28□□□□□ -0.12
CHRNB4-204ENST00000559849 P2RY13Q9BPV8 354 aa14.28□□□□□ -0.12
CHRNB4-204ENST00000559849 POPDC2Q9HBU9 364 aa14.28□□□□□ -0.12
CHRNB4-204ENST00000559849 SPHK2Q9NRA0 654 aa14.28□□□□□ -0.12
CHRNB4-204ENST00000559849 TJP2Q9UDY2 1190 aa14.28□□□□□ -0.12
CHRNB4-204ENST00000559849 ARIH1Q9Y4X5 557 aaPredicted RBP14.28□□□□□ -0.12
CHRNB4-204ENST00000559849 GALR2O43603 387 aaPredicted RBP14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms