RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 BCLAF3A2AJT9 711 aaKnown RBP10.42□□□□□ -0.74
LRRC28-216ENST00000559819 A8MXQ7 604 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 TOP3BO95985 862 aaKnown RBP10.42□□□□□ -0.74
LRRC28-216ENST00000559819 GM2AP17900 193 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 AKAP5P24588 427 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 L1CAMP32004 1257 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 ELF1P32519 619 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 CTC1Q2NKJ3 1217 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 SLC45A4Q5BKX6 768 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 TTC39BQ5VTQ0 682 aaPredicted RBP10.42□□□□□ -0.74
LRRC28-216ENST00000559819 UNC5AQ6ZN44 842 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 CLNKQ7Z7G1 428 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 SESTD1Q86VW0 696 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 SLC26A11Q86WA9 606 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 PYROXD2Q8N2H3 581 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 CCDC185Q8N715 623 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 UPF1Q92900 1129 aaKnown RBP eCLIP10.42□□□□□ -0.74
LRRC28-216ENST00000559819 RTP4Q96DX8 246 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 SNX27Q96L92 541 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 SRPK1Q96SB4 655 aaKnown RBP10.42□□□□□ -0.74
LRRC28-216ENST00000559819 KATNBL1Q9H079 304 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 KLC2Q9H0B6 622 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 ZNF395Q9H8N7 513 aaPredicted RBP10.42□□□□□ -0.74
LRRC28-216ENST00000559819 KCNK13Q9HB14 408 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 ARL8BQ9NVJ2 186 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 NOP53Q9NZM5 478 aaKnown RBP10.42□□□□□ -0.74
LRRC28-216ENST00000559819 SLC17A6Q9P2U8 582 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 HESX1Q9UBX0 185 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 MAD1L1Q9Y6D9 718 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 CFAP69A5D8W1 941 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 SLC15A5A6NIM6 579 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 COPEO14579 308 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 ATP5HO75947 161 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 SNAI1O95863 264 aaPredicted RBP10.42□□□□□ -0.74
LRRC28-216ENST00000559819 SMPD1P17405 629 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 LMO2P25791 158 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 SERPINB4P48594 390 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 ARFIP2P53365 341 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 PRKD1Q15139 912 aaPredicted RBP10.42□□□□□ -0.74
LRRC28-216ENST00000559819 KYAT1Q16773 422 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 PARP6Q2NL67 630 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 CES4AQ5XG92 561 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 UNC5BQ8IZJ1 945 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 TTC8Q8TAM2 541 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 TEKT4Q8WW24 435 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 MYCBPQ99417 103 aaPredicted RBP10.42□□□□□ -0.74
LRRC28-216ENST00000559819 MIPEPQ99797 713 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 TRIM55Q9BYV6 548 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 SLC13A1Q9BZW2 595 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 NXF3Q9H4D5 531 aaKnown RBP10.42□□□□□ -0.74
LRRC28-216ENST00000559819 PNPLA8Q9NP80 782 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 TMPRSS4Q9NRS4 437 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 PIH1D1Q9NWS0 290 aaKnown RBP10.42□□□□□ -0.74
LRRC28-216ENST00000559819 KLK14Q9P0G3 267 aa10.42□□□□□ -0.74
LRRC28-216ENST00000559819 FAM237BA0A1B0GVD1 139 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 CYB561D2O14569 222 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 ADCY6O43306 1168 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 SERPINB3P29508 390 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 SMYD5Q6GMV2 418 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 RFWD3Q6PCD5 774 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 CATSPER4Q7RTX7 472 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 ARMC2Q8NEN0 867 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 INPP5DQ92835 1189 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 OSMRQ99650 979 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 ZNF670Q9BS34 389 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 CXorf56Q9H5V9 222 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 GOLGA2P5Q9HBQ8 144 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 VTA1Q9NP79 307 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 MTMR10Q9NXD2 777 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 CNTN3Q9P232 1028 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 AP4E1Q9UPM8 1137 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 COL1A2P08123 1366 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 PCNTO95613 3336 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 MDM4O15151 490 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 SPTLC1O15269 473 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 PEX11AO75192 247 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 RFPL1O75677 317 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 MMP3P08254 477 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 VAV1P15498 845 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 AMPD1P23109 780 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 MRPS5P82675 430 aaKnown RBP10.41□□□□□ -0.74
LRRC28-216ENST00000559819 STILQ15468 1287 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 KCNT2Q6UVM3 1135 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 TTC7BQ86TV6 843 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 CHSY1Q86X52 802 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 CDKL3Q8IVW4 592 aaPredicted RBP10.41□□□□□ -0.74
LRRC28-216ENST00000559819 SHCBP1Q8NEM2 672 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 GPRC5AQ8NFJ5 357 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 ZNF570Q96NI8 536 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 TBCBQ99426 244 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 CEP41Q9BYV8 373 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 ADAMTS10Q9H324 1103 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 PCMTD2Q9NV79 361 aa10.41□□□□□ -0.74
LRRC28-216ENST00000559819 TRIP11Q15643 1979 aa10.4□□□□□ -0.74
LRRC28-216ENST00000559819 SYNJ2BP-COX16A0A087WUM0 186 aa10.4□□□□□ -0.74
LRRC28-216ENST00000559819 A6NJR5 290 aa10.4□□□□□ -0.74
LRRC28-216ENST00000559819 H0Y3Z8 333 aa10.4□□□□□ -0.74
LRRC28-216ENST00000559819 SPAG6O75602 509 aa10.4□□□□□ -0.74
LRRC28-216ENST00000559819 HAUS5O94927 633 aa10.4□□□□□ -0.74
LRRC28-216ENST00000559819 APOEP02649 317 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms