RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 MDM4O15151 490 aa18.07■□□□□ 0.48
CHRNA3-206ENST00000559658 YWHAQP27348 245 aa18.07■□□□□ 0.48
CHRNA3-206ENST00000559658 MMRN1Q13201 1228 aa18.07■□□□□ 0.48
CHRNA3-206ENST00000559658 SMC1AQ14683 1233 aaKnown RBP18.07■□□□□ 0.48
CHRNA3-206ENST00000559658 TPGS2Q68CL5 300 aa18.07■□□□□ 0.48
CHRNA3-206ENST00000559658 SLC13A5Q86YT5 568 aaPredicted RBP18.07■□□□□ 0.48
CHRNA3-206ENST00000559658 PYROXD2Q8N2H3 581 aa18.07■□□□□ 0.48
CHRNA3-206ENST00000559658 KLHL5Q96PQ7 755 aa18.07■□□□□ 0.48
CHRNA3-206ENST00000559658 FAM118BQ9BPY3 351 aa18.07■□□□□ 0.48
CHRNA3-206ENST00000559658 WDR6Q9NNW5 1121 aaKnown RBP18.07■□□□□ 0.48
CHRNA3-206ENST00000559658 TLR9Q9NR96 1032 aa18.07■□□□□ 0.48
CHRNA3-206ENST00000559658 SFMBT1Q9UHJ3 866 aa18.07■□□□□ 0.48
CHRNA3-206ENST00000559658 TTC7AQ9ULT0 858 aaPredicted RBP18.07■□□□□ 0.48
CHRNA3-206ENST00000559658 OBSL1O75147 1896 aa18.07■□□□□ 0.48
CHRNA3-206ENST00000559658 CTIFO43310 598 aaKnown RBP18.06■□□□□ 0.48
CHRNA3-206ENST00000559658 PRPSAP2O60256 369 aa18.06■□□□□ 0.48
CHRNA3-206ENST00000559658 HMGA1P17096 107 aaKnown RBP18.06■□□□□ 0.48
CHRNA3-206ENST00000559658 PAFAH1B1P43034 410 aa18.06■□□□□ 0.48
CHRNA3-206ENST00000559658 RPL10AP62906 217 aaKnown RBP18.06■□□□□ 0.48
CHRNA3-206ENST00000559658 TWF1Q12792 350 aa18.06■□□□□ 0.48
CHRNA3-206ENST00000559658 KAZNQ674X7 775 aa18.06■□□□□ 0.48
CHRNA3-206ENST00000559658 SPOCD1Q6ZMY3 1216 aa18.06■□□□□ 0.48
CHRNA3-206ENST00000559658 STRADAQ7RTN6 431 aa18.06■□□□□ 0.48
CHRNA3-206ENST00000559658 EXD1Q8NHP7 514 aa18.06■□□□□ 0.48
CHRNA3-206ENST00000559658 CASP10Q92851 521 aa18.06■□□□□ 0.48
CHRNA3-206ENST00000559658 FAM204AQ9H8W3 233 aa18.06■□□□□ 0.48
CHRNA3-206ENST00000559658 DDIT4Q9NX09 232 aa18.06■□□□□ 0.48
CHRNA3-206ENST00000559658 STAP1Q9ULZ2 295 aa18.06■□□□□ 0.48
CHRNA3-206ENST00000559658 R3HDM2Q9Y2K5 976 aaKnown RBP18.06■□□□□ 0.48
CHRNA3-206ENST00000559658 INSL5Q9Y5Q6 135 aa18.06■□□□□ 0.48
CHRNA3-206ENST00000559658 PRRG1O14668 218 aa18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 ZRANB2O95218 330 aaKnown RBP eCLIP18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 TBX18O95935 607 aa18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 RDXP35241 583 aaKnown RBP18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 CDKN2BP42772 138 aa18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 ARSEP51690 589 aa18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 ELF2Q15723 593 aa18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 HADHQ16836 314 aaKnown RBP18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 HINFPQ9BQA5 517 aa18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 PLVAPQ9BX97 442 aa18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 NKX2-4Q9H2Z4 354 aa18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 FBXO44Q9H4M3 255 aa18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 LZTS1Q9Y250 596 aa18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 DOCK6Q96HP0 2047 aa18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 EPOPA6NHQ4 379 aa18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 KRIT1O00522 736 aa18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 ENDOD1O94919 500 aa18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 KRT7P08729 469 aa18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 GTF2F1P35269 517 aaKnown RBP eCLIP18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 GGCXP38435 758 aa18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 TUFMP49411 452 aaKnown RBP18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 DEUP1Q05D60 604 aa18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 BTBD8Q5XKL5 378 aa18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 KLHL7Q8IXQ5 586 aa18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 ATG4AQ8WYN0 398 aa18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 GOLGA1Q92805 767 aa18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 OSBPL8Q9BZF1 889 aa18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 DDX47Q9H0S4 455 aaKnown RBP18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 PCDHA11Q9Y5I1 949 aa18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 ANAPC1Q9H1A4 1944 aa18.05■□□□□ 0.48
CHRNA3-206ENST00000559658 hCG_1818297A0A087WSY0 165 aa18.04■□□□□ 0.48
CHRNA3-206ENST00000559658 EFCAB8A8MWE9 144 aa18.04■□□□□ 0.48
CHRNA3-206ENST00000559658 NRG2O14511 850 aaPredicted RBP18.04■□□□□ 0.48
CHRNA3-206ENST00000559658 FSCN2O14926 492 aa18.04■□□□□ 0.48
CHRNA3-206ENST00000559658 IGLV3-25P01717 112 aa18.04■□□□□ 0.48
CHRNA3-206ENST00000559658 KDELR1P24390 212 aa18.04■□□□□ 0.48
CHRNA3-206ENST00000559658 KLF1Q13351 362 aaPredicted RBP18.04■□□□□ 0.48
CHRNA3-206ENST00000559658 PLD1Q13393 1074 aa18.04■□□□□ 0.48
CHRNA3-206ENST00000559658 LILRA6Q6PI73 481 aa18.04■□□□□ 0.48
CHRNA3-206ENST00000559658 TCEAL8Q8IYN2 117 aa18.04■□□□□ 0.48
CHRNA3-206ENST00000559658 PRELID2Q8N945 189 aa18.04■□□□□ 0.48
CHRNA3-206ENST00000559658 MRPL43Q8N983 215 aaKnown RBP18.04■□□□□ 0.48
CHRNA3-206ENST00000559658 CMASQ8NFW8 434 aaPredicted RBP18.04■□□□□ 0.48
CHRNA3-206ENST00000559658 HDAC7Q8WUI4 952 aa18.04■□□□□ 0.48
CHRNA3-206ENST00000559658 TTLL2Q9BWV7 592 aa18.04■□□□□ 0.48
CHRNA3-206ENST00000559658 CCSER2Q9H7U1 834 aa18.04■□□□□ 0.48
CHRNA3-206ENST00000559658 MTMR10Q9NXD2 777 aa18.04■□□□□ 0.48
CHRNA3-206ENST00000559658 RNF14Q9UBS8 474 aa18.04■□□□□ 0.48
CHRNA3-206ENST00000559658 AP4E1Q9UPM8 1137 aa18.04■□□□□ 0.48
CHRNA3-206ENST00000559658 SNX10Q9Y5X0 201 aa18.04■□□□□ 0.48
CHRNA3-206ENST00000559658 RTN3O95197 1032 aaPredicted RBP18.03■□□□□ 0.48
CHRNA3-206ENST00000559658 RHOXF2BP0C7M4 288 aa18.03■□□□□ 0.48
CHRNA3-206ENST00000559658 CDH6P55285 790 aa18.03■□□□□ 0.48
CHRNA3-206ENST00000559658 DPYSL3Q14195 570 aa18.03■□□□□ 0.48
CHRNA3-206ENST00000559658 MON1AQ86VX9 555 aa18.03■□□□□ 0.48
CHRNA3-206ENST00000559658 RCOR2Q8IZ40 523 aa18.03■□□□□ 0.48
CHRNA3-206ENST00000559658 TGS1Q96RS0 853 aaKnown RBP18.03■□□□□ 0.48
CHRNA3-206ENST00000559658 KCTD15Q96SI1 283 aaPredicted RBP18.03■□□□□ 0.48
CHRNA3-206ENST00000559658 KRT12Q99456 494 aa18.03■□□□□ 0.48
CHRNA3-206ENST00000559658 RHOXF2Q9BQY4 288 aa18.03■□□□□ 0.48
CHRNA3-206ENST00000559658 CALN1Q9BXU9 219 aa18.03■□□□□ 0.48
CHRNA3-206ENST00000559658 ZNF334Q9HCZ1 680 aaPredicted RBP18.03■□□□□ 0.48
CHRNA3-206ENST00000559658 ABCC13Q9NSE7 274 aa18.03■□□□□ 0.48
CHRNA3-206ENST00000559658 DDX56Q9NY93 547 aaKnown RBP18.03■□□□□ 0.48
CHRNA3-206ENST00000559658 FBXW11Q9UKB1 542 aa18.03■□□□□ 0.48
CHRNA3-206ENST00000559658 RWDD3Q9Y3V2 267 aa18.03■□□□□ 0.48
CHRNA3-206ENST00000559658 IRAK3Q9Y616 596 aa18.03■□□□□ 0.48
CHRNA3-206ENST00000559658 PDE4DIPQ5VU43 2346 aa18.03■□□□□ 0.48
CHRNA3-206ENST00000559658 IL4RP24394 825 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms