RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 BOLA3Q53S33 107 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 TRMT10BQ6PF06 316 aaKnown RBP17.2■□□□□ 0.34
SPG11-215ENST00000559193 OLFML1Q6UWY5 402 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 TREML1Q86YW5 311 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 FAM172AQ8WUF8 416 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 TEKT4Q8WW24 435 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 E2F7Q96AV8 911 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 CPB2Q96IY4 423 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 PPP1R16BQ96T49 567 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 PTPRFP10586 1907 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 HMX2A2RU54 273 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 CAPN14A8MX76 684 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 C22orf31O95567 290 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 PDHA1P08559 390 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 CPA2P48052 419 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 CHI3L2Q15782 390 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 GOLGA7BQ2TAP0 167 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 ARID3BQ8IVW6 561 aaPredicted RBP17.2■□□□□ 0.34
SPG11-215ENST00000559193 LMNTD2Q8IXW0 634 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 USP6NLQ92738 828 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 LBHD1Q9BQE6 289 aaPredicted RBP17.2■□□□□ 0.34
SPG11-215ENST00000559193 NFKBIZQ9BYH8 718 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 ASB7Q9H672 318 aa17.2■□□□□ 0.34
SPG11-215ENST00000559193 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.2■□□□□ 0.34
SPG11-215ENST00000559193 USP2O75604 605 aaPredicted RBP17.19■□□□□ 0.34
SPG11-215ENST00000559193 METTL18O95568 372 aa17.19■□□□□ 0.34
SPG11-215ENST00000559193 TMEM132DQ14C87 1099 aa17.19■□□□□ 0.34
SPG11-215ENST00000559193 SNX30Q5VWJ9 437 aa17.19■□□□□ 0.34
SPG11-215ENST00000559193 TRIM42Q8IWZ5 723 aa17.19■□□□□ 0.34
SPG11-215ENST00000559193 FBXO16Q8IX29 292 aaPredicted RBP17.19■□□□□ 0.34
SPG11-215ENST00000559193 MPP5Q8N3R9 675 aa17.19■□□□□ 0.34
SPG11-215ENST00000559193 MCUQ8NE86 351 aa17.19■□□□□ 0.34
SPG11-215ENST00000559193 KHSRPQ92945 711 aaKnown RBP eCLIP17.19■□□□□ 0.344e-7■■■□□ 17.4
SPG11-215ENST00000559193 ACAP3Q96P50 834 aa17.19■□□□□ 0.34
SPG11-215ENST00000559193 PCMTD2Q9NV79 361 aa17.19■□□□□ 0.34
SPG11-215ENST00000559193 FAM159BA6NKW6 160 aa17.19■□□□□ 0.34
SPG11-215ENST00000559193 HBP1O60381 514 aa17.19■□□□□ 0.34
SPG11-215ENST00000559193 TBX10O75333 385 aa17.19■□□□□ 0.34
SPG11-215ENST00000559193 PHKA2P46019 1235 aa17.19■□□□□ 0.34
SPG11-215ENST00000559193 TNFAIP2Q03169 654 aa17.19■□□□□ 0.34
SPG11-215ENST00000559193 FAM187BQ17R55 369 aa17.19■□□□□ 0.34
SPG11-215ENST00000559193 LGSNQ5TDP6 509 aa17.19■□□□□ 0.34
SPG11-215ENST00000559193 ATG16L1Q676U5 607 aa17.19■□□□□ 0.34
SPG11-215ENST00000559193 PMF1Q6P1K2 205 aa17.19■□□□□ 0.34
SPG11-215ENST00000559193 FBXO27Q8NI29 283 aa17.19■□□□□ 0.34
SPG11-215ENST00000559193 LRRC39Q96DD0 335 aa17.19■□□□□ 0.34
SPG11-215ENST00000559193 SIGLEC10Q96LC7 697 aa17.19■□□□□ 0.34
SPG11-215ENST00000559193 NT5C1AQ9BXI3 368 aa17.19■□□□□ 0.34
SPG11-215ENST00000559193 MIS12Q9H081 205 aa17.19■□□□□ 0.34
SPG11-215ENST00000559193 SMARCAD1Q9H4L7 1026 aa17.19■□□□□ 0.34
SPG11-215ENST00000559193 SLC24A3Q9HC58 644 aa17.19■□□□□ 0.34
SPG11-215ENST00000559193 CAPN9O14815 690 aa17.18■□□□□ 0.34
SPG11-215ENST00000559193 CNMDO75829 334 aa17.18■□□□□ 0.34
SPG11-215ENST00000559193 KRT38O76015 456 aa17.18■□□□□ 0.34
SPG11-215ENST00000559193 IGBP1P78318 339 aa17.18■□□□□ 0.34
SPG11-215ENST00000559193 APBB2Q92870 758 aa17.18■□□□□ 0.34
SPG11-215ENST00000559193 FAM136AQ96C01 138 aa17.18■□□□□ 0.34
SPG11-215ENST00000559193 ZNF670Q9BS34 389 aa17.18■□□□□ 0.34
SPG11-215ENST00000559193 C20orf27Q9GZN8 174 aa17.18■□□□□ 0.34
SPG11-215ENST00000559193 RNPEPQ9H4A4 650 aa17.18■□□□□ 0.34
SPG11-215ENST00000559193 BRCA1P38398 1863 aaKnown RBP17.18■□□□□ 0.34
SPG11-215ENST00000559193 A0A087WZ62 844 aa17.18■□□□□ 0.34
SPG11-215ENST00000559193 UPP2O95045 317 aa17.18■□□□□ 0.34
SPG11-215ENST00000559193 ENO1P06733 434 aaKnown RBP17.18■□□□□ 0.34
SPG11-215ENST00000559193 GSTA2P09210 222 aa17.18■□□□□ 0.34
SPG11-215ENST00000559193 SDC4P31431 198 aa17.18■□□□□ 0.34
SPG11-215ENST00000559193 PGM1P36871 562 aa17.18■□□□□ 0.34
SPG11-215ENST00000559193 SLC26A2P50443 739 aa17.18■□□□□ 0.34
SPG11-215ENST00000559193 SLC34A1Q06495 639 aa17.18■□□□□ 0.34
SPG11-215ENST00000559193 PPP6R3Q5H9R7 873 aaPredicted RBP17.18■□□□□ 0.34
SPG11-215ENST00000559193 PPP1R26Q5T8A7 1209 aaPredicted RBP17.18■□□□□ 0.34
SPG11-215ENST00000559193 TTC30AQ86WT1 665 aa17.18■□□□□ 0.34
SPG11-215ENST00000559193 NUDCD3Q8IVD9 361 aa17.18■□□□□ 0.34
SPG11-215ENST00000559193 GSDMBQ8TAX9 411 aa17.18■□□□□ 0.34
SPG11-215ENST00000559193 MTBPQ96DY7 904 aa17.18■□□□□ 0.34
SPG11-215ENST00000559193 TBCBQ99426 244 aa17.18■□□□□ 0.34
SPG11-215ENST00000559193 EBNA1BP2Q99848 306 aaKnown RBP17.18■□□□□ 0.34
SPG11-215ENST00000559193 FDXACB1Q9BRP7 624 aaPredicted RBP17.18■□□□□ 0.34
SPG11-215ENST00000559193 PPARGC1AQ9UBK2 798 aaKnown RBP17.18■□□□□ 0.34
SPG11-215ENST00000559193 MARCOQ9UEW3 520 aaPredicted RBP17.18■□□□□ 0.34
SPG11-215ENST00000559193 MAD1L1Q9Y6D9 718 aa17.18■□□□□ 0.34
SPG11-215ENST00000559193 DPPA5A6NC42 116 aa17.17■□□□□ 0.34
SPG11-215ENST00000559193 B2RBV5 119 aa17.17■□□□□ 0.34
SPG11-215ENST00000559193 H3BRJ5 948 aa17.17■□□□□ 0.34
SPG11-215ENST00000559193 MDM4O15151 490 aa17.17■□□□□ 0.34
SPG11-215ENST00000559193 SNNO75324 88 aaPredicted RBP17.17■□□□□ 0.34
SPG11-215ENST00000559193 TOP3BO95985 862 aaKnown RBP17.17■□□□□ 0.34
SPG11-215ENST00000559193 TFE3P19532 575 aaPredicted RBP17.17■□□□□ 0.34
SPG11-215ENST00000559193 TUBP50607 506 aa17.17■□□□□ 0.34
SPG11-215ENST00000559193 HDAC4P56524 1084 aa17.17■□□□□ 0.34
SPG11-215ENST00000559193 MRPS35P82673 323 aaKnown RBP17.17■□□□□ 0.34
SPG11-215ENST00000559193 GBE1Q04446 702 aa17.17■□□□□ 0.34
SPG11-215ENST00000559193 PKDCCQ504Y2 493 aa17.17■□□□□ 0.34
SPG11-215ENST00000559193 MDH1BQ5I0G3 518 aa17.17■□□□□ 0.34
SPG11-215ENST00000559193 MROH9Q5TGP6 573 aa17.17■□□□□ 0.34
SPG11-215ENST00000559193 LRRC74BQ6ZQY2 392 aa17.17■□□□□ 0.34
SPG11-215ENST00000559193 GADL1Q6ZQY3 521 aa17.17■□□□□ 0.34
SPG11-215ENST00000559193 CDKL3Q8IVW4 592 aaPredicted RBP17.17■□□□□ 0.34
SPG11-215ENST00000559193 PDCD7Q8N8D1 485 aaKnown RBP17.17■□□□□ 0.34
SPG11-215ENST00000559193 DTX3LQ8TDB6 740 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms