RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 KIAA2013Q8IYS2 634 aa18.46■□□□□ 0.55
SMAD3-210ENST00000559092 SIX6OS1Q8N1H7 587 aa18.46■□□□□ 0.55
SMAD3-210ENST00000559092 PHTF2Q8N3S3 785 aa18.46■□□□□ 0.55
SMAD3-210ENST00000559092 RBBP8NLQ8NC74 664 aaPredicted RBP18.46■□□□□ 0.55
SMAD3-210ENST00000559092 CNOT6LQ96LI5 555 aaKnown RBP18.46■□□□□ 0.55
SMAD3-210ENST00000559092 XPO6Q96QU8 1125 aaKnown RBP18.46■□□□□ 0.55
SMAD3-210ENST00000559092 CNGB3Q9NQW8 809 aa18.46■□□□□ 0.55
SMAD3-210ENST00000559092 OLA1Q9NTK5 396 aaKnown RBP18.46■□□□□ 0.55
SMAD3-210ENST00000559092 MARCH2Q9P0N8 246 aa18.46■□□□□ 0.55
SMAD3-210ENST00000559092 MMP17Q9ULZ9 603 aa18.46■□□□□ 0.55
SMAD3-210ENST00000559092 GTPBP10A4D1E9 387 aaKnown RBP18.45■□□□□ 0.54
SMAD3-210ENST00000559092 TBC1D3BA6NDS4 549 aa18.45■□□□□ 0.54
SMAD3-210ENST00000559092 AXIN1O15169 862 aa18.45■□□□□ 0.54
SMAD3-210ENST00000559092 CACNG3O60359 315 aa18.45■□□□□ 0.54
SMAD3-210ENST00000559092 TULP3O75386 442 aa18.45■□□□□ 0.54
SMAD3-210ENST00000559092 RPP40O75818 363 aaKnown RBP18.45■□□□□ 0.54
SMAD3-210ENST00000559092 PRKCSHP14314 528 aaPredicted RBP18.45■□□□□ 0.54
SMAD3-210ENST00000559092 ERCC5P28715 1186 aaPredicted RBP18.45■□□□□ 0.54
SMAD3-210ENST00000559092 HOXC13P31276 330 aa18.45■□□□□ 0.54
SMAD3-210ENST00000559092 CHKAP35790 457 aa18.45■□□□□ 0.54
SMAD3-210ENST00000559092 KIR2DL1P43626 348 aaPredicted RBP18.45■□□□□ 0.54
SMAD3-210ENST00000559092 PXNP49023 591 aaPredicted RBP18.45■□□□□ 0.54
SMAD3-210ENST00000559092 DGKEP52429 567 aa18.45■□□□□ 0.54
SMAD3-210ENST00000559092 SEC13P55735 322 aa18.45■□□□□ 0.54
SMAD3-210ENST00000559092 MESP2Q0VG99 397 aa18.45■□□□□ 0.54
SMAD3-210ENST00000559092 EFEMP1Q12805 493 aa18.45■□□□□ 0.54
SMAD3-210ENST00000559092 CT47A1Q5JQC4 288 aaPredicted RBP18.45■□□□□ 0.54
SMAD3-210ENST00000559092 BHLHA9Q7RTU4 235 aa18.45■□□□□ 0.54
SMAD3-210ENST00000559092 CACNA2D4Q7Z3S7 1137 aa18.45■□□□□ 0.54
SMAD3-210ENST00000559092 IRF2BP1Q8IU81 584 aa18.45■□□□□ 0.54
SMAD3-210ENST00000559092 NAT16Q8N8M0 369 aa18.45■□□□□ 0.54
SMAD3-210ENST00000559092 HSFY1Q96LI6 401 aa18.45■□□□□ 0.54
SMAD3-210ENST00000559092 KREMEN1Q96MU8 473 aa18.45■□□□□ 0.54
SMAD3-210ENST00000559092 HHIPQ96QV1 700 aa18.45■□□□□ 0.54
SMAD3-210ENST00000559092 BBS2Q9BXC9 721 aa18.45■□□□□ 0.54
SMAD3-210ENST00000559092 THAP9Q9H5L6 903 aa18.45■□□□□ 0.54
SMAD3-210ENST00000559092 UBE2TQ9NPD8 197 aaPredicted RBP18.45■□□□□ 0.54
SMAD3-210ENST00000559092 POLR3BQ9NW08 1133 aaPredicted RBP18.45■□□□□ 0.54
SMAD3-210ENST00000559092 DACH1Q9UI36 760 aa18.45■□□□□ 0.54
SMAD3-210ENST00000559092 STARD13Q9Y3M8 1113 aa18.45■□□□□ 0.54
SMAD3-210ENST00000559092 KLKB1P03952 638 aa18.44■□□□□ 0.54
SMAD3-210ENST00000559092 CHRM1P11229 460 aaPredicted RBP18.44■□□□□ 0.54
SMAD3-210ENST00000559092 TYRP14679 529 aa18.44■□□□□ 0.54
SMAD3-210ENST00000559092 MFAP3P55082 362 aa18.44■□□□□ 0.54
SMAD3-210ENST00000559092 ADIGQ0VDE8 80 aa18.44■□□□□ 0.54
SMAD3-210ENST00000559092 SRSF5Q13243 272 aaKnown RBP18.44■□□□□ 0.54
SMAD3-210ENST00000559092 MEA1Q16626 185 aa18.44■□□□□ 0.54
SMAD3-210ENST00000559092 TPD52L1Q16890 204 aaPredicted RBP18.44■□□□□ 0.54
SMAD3-210ENST00000559092 BSPRYQ5W0U4 402 aa18.44■□□□□ 0.54
SMAD3-210ENST00000559092 GBP6Q6ZN66 633 aa18.44■□□□□ 0.54
SMAD3-210ENST00000559092 TRMT11Q7Z4G4 463 aaKnown RBP18.44■□□□□ 0.54
SMAD3-210ENST00000559092 CREBRFQ8IUR6 639 aa18.44■□□□□ 0.54
SMAD3-210ENST00000559092 TSTD1Q8NFU3 115 aa18.44■□□□□ 0.54
SMAD3-210ENST00000559092 RNF139Q8WU17 664 aa18.44■□□□□ 0.54
SMAD3-210ENST00000559092 IRGQQ8WZA9 623 aa18.44■□□□□ 0.54
SMAD3-210ENST00000559092 LOXL4Q96JB6 756 aa18.44■□□□□ 0.54
SMAD3-210ENST00000559092 ZSWIM1Q9BR11 485 aa18.44■□□□□ 0.54
SMAD3-210ENST00000559092 NUP62CLQ9H1M0 184 aa18.44■□□□□ 0.54
SMAD3-210ENST00000559092 ABCC13Q9NSE7 274 aa18.44■□□□□ 0.54
SMAD3-210ENST00000559092 RASAL2Q9UJF2 1139 aa18.44■□□□□ 0.54
SMAD3-210ENST00000559092 YJEFN3A6XGL0 299 aa18.43■□□□□ 0.54
SMAD3-210ENST00000559092 E7ENQ6 273 aa18.43■□□□□ 0.54
SMAD3-210ENST00000559092 NEDD8-MDP1E9PL57 170 aa18.43■□□□□ 0.54
SMAD3-210ENST00000559092 M0QYV0 167 aa18.43■□□□□ 0.54
SMAD3-210ENST00000559092 FBXO21O94952 628 aa18.43■□□□□ 0.54
SMAD3-210ENST00000559092 TGM1P22735 817 aa18.43■□□□□ 0.54
SMAD3-210ENST00000559092 BRD2P25440 801 aaKnown RBP18.43■□□□□ 0.54
SMAD3-210ENST00000559092 KDSRQ06136 332 aa18.43■□□□□ 0.54
SMAD3-210ENST00000559092 CRY1Q16526 586 aa18.43■□□□□ 0.54
SMAD3-210ENST00000559092 LPAL2Q16609 132 aa18.43■□□□□ 0.54
SMAD3-210ENST00000559092 EOGTQ5NDL2 527 aa18.43■□□□□ 0.54
SMAD3-210ENST00000559092 GRAMD4Q6IC98 578 aa18.43■□□□□ 0.54
SMAD3-210ENST00000559092 PMF1Q6P1K2 205 aa18.43■□□□□ 0.54
SMAD3-210ENST00000559092 TRIM65Q6PJ69 517 aa18.43■□□□□ 0.54
SMAD3-210ENST00000559092 TPGS1Q6ZTW0 290 aa18.43■□□□□ 0.54
SMAD3-210ENST00000559092 FAM114A1Q8IWE2 563 aa18.43■□□□□ 0.54
SMAD3-210ENST00000559092 TERB1Q8NA31 727 aa18.43■□□□□ 0.54
SMAD3-210ENST00000559092 IL17RCQ8NAC3 791 aa18.43■□□□□ 0.54
SMAD3-210ENST00000559092 NDRG1Q92597 394 aaKnown RBP18.43■□□□□ 0.54
SMAD3-210ENST00000559092 PLD4Q96BZ4 506 aa18.43■□□□□ 0.54
SMAD3-210ENST00000559092 LMBRD1Q9NUN5 540 aa18.43■□□□□ 0.54
SMAD3-210ENST00000559092 DNAJC17Q9NVM6 304 aaKnown RBP18.43■□□□□ 0.54
SMAD3-210ENST00000559092 HBS1LQ9Y450 684 aaKnown RBP18.43■□□□□ 0.54
SMAD3-210ENST00000559092 HELZP42694 1942 aaKnown RBP18.43■□□□□ 0.54
SMAD3-210ENST00000559092 SLC12A8A0AV02 714 aa18.42■□□□□ 0.54
SMAD3-210ENST00000559092 MED7O43513 233 aa18.42■□□□□ 0.54
SMAD3-210ENST00000559092 FOXD2O60548 495 aaPredicted RBP18.42■□□□□ 0.54
SMAD3-210ENST00000559092 ALDH1A2O94788 518 aa18.42■□□□□ 0.54
SMAD3-210ENST00000559092 KRT5P13647 590 aa18.42■□□□□ 0.54
SMAD3-210ENST00000559092 CORO1AP31146 461 aaKnown RBP18.42■□□□□ 0.54
SMAD3-210ENST00000559092 TIE1P35590 1138 aa18.42■□□□□ 0.54
SMAD3-210ENST00000559092 MTIF2P46199 727 aaKnown RBP18.42■□□□□ 0.54
SMAD3-210ENST00000559092 ID4P47928 161 aa18.42■□□□□ 0.54
SMAD3-210ENST00000559092 RPL34P49207 117 aaKnown RBP18.42■□□□□ 0.54
SMAD3-210ENST00000559092 DAOAP59103 153 aa18.42■□□□□ 0.54
SMAD3-210ENST00000559092 TRIP4Q15650 581 aaPredicted RBP18.42■□□□□ 0.54
SMAD3-210ENST00000559092 EXOC3L4Q17RC7 722 aa18.42■□□□□ 0.54
SMAD3-210ENST00000559092 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.42■□□□□ 0.54
SMAD3-210ENST00000559092 C11orf74Q86VG3 221 aa18.42■□□□□ 0.54
SMAD3-210ENST00000559092 RASSF3Q86WH2 238 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms